Blg00184.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00184.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1342871..1344582+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00184.0 ID=Blg00184.0|Name=Blg00184.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1712bp|location=Sequence derived from alignment at Sc0000026:1342871..1344582+ (Branchiostoma lanceolatum)
ATGACCGTAACGGTTTTCCCGAGGTTTGTGTTTTTGGGATTTTTGAAAAA TGCCCTTAATTTTGAATTATGGGCAATTTAGTGCGAAAAATGTCAAAAAA TGTCATTTTTTCATATTTTTGTGGCTATTAACTATACTTAGAATCAAAAA TTAAAAAATTCCAAAAACACAAAGTTTTGTTTTGTTCTCGGTCGACGAAA AATACGAAGATAAGAGATATTCATTTACATTTGAAGGCTGGCCTTTGCGA TGTGAGCCTGACAAAACGGGCTCCCTCAAACCTGAGAATTATCGTGTTTG GGAGCAAAATATAGAAAATTCAGCCATTCAGCGCAAAATTACAACATTCA AAGTTTGCAAAATCGCAAATTTCGTTTTATTTTGAAAAGATTTTCCCGTC CCCACTATTTTGTTTATTTACAAATGTTTTGCCGTTAGCCAAAACGTTGC CCGTGTAACCCGATACCTTGTCGAACACACGTAGCAACGGGAAAGAATAC CCTAGTGACAGACCACCGTGTGTGTATATTGTTCAGTTAGTCAATGACGT TACATTAGGCATGATATGTGCATAATTATTTAGACGCATTTACTATCTCT TTGTGCATCCTTCCTAACGCGTGCTCAAATCTTCCCAAGTAACTATTAGA TAAACGCTTCATGTAGATGCTTATTATGTTTTAATACTGCTTCTAGGATG GCTCTTCCACATACCGCAAGGGTTGCAGCTCTTCCATGCACCCCACCCAC GCATGCCATCGGCGCAGGCCCAGCCGCTGGTGTGGAACCCGACATCATCG AGCTACGAGAGGTCCAGCAGCTCGCCACCAGGCTCCTCGGGATCCAGTTC CTCGAAGCAGACGACGAGGCTGAGGAGACCGCGAGGTTAGGCAGGGTGCG AGACTACGAGCAGCAGTTGAGAGCAGCCCGCTTTGAGAACTTTGCCAGTA GGACAGACTATAGCATTAAGTATGCAAACCTTGACGTGATTATGGAGAGA GGGAGATCTGTTTGTAAGATAGAATGGCCGGGCGGAAATGCCACAGGGTT TCTGATTGGGAGAAAGTACGTGCTCACCAACAACCATGTTTTCGACCTGA TGAATGCTGCGACGAAAAGAAATATTCCTGCAAATAAAAAGACGCAGAAT TATCGTGTTACTTTCTTCCTCTCAGAAATTCAGACTAACATGTCTTTTAC TCTGGTGCCCAGAAAGCCTATTTCGTCAGATAAGGCCTTAGATTACGCCA TACTTGAGATCGACACAGCGACTCTGATATAGTGAAGACGACCTAGACCA TCTCCGTCCCCTGGGTGAGTTCGTCTCGGAAGATCTCGCGAGAGGGAGCG TGATCATTCTGATTGGTCACCCTGACGGCCATGATAAGAAGGTGGAGTTC TGTGCTGTAGAGGGGGTAGACAACAGTCGCACGGTTTGTGTCAATTTCGG CAATCCTTTTGTGCAGGCACAGACGATGACGTACCACGTGTCGACCTTTT TTCACGGTTCCTCAGGGTCCCCCGGGTTCGATAAGGATGGTTGCCTTGTG CTGATGCACTCGCGGGGCTTCTATCCGTACCAGGGCGCGCAGAGTACCAT CGAGCAGGGCGTTCTGCTCTCCAGCGTCAAGGCACATGCAAAGCGATCCC TTCCCGGAGACACAATCCTGGAAATTTTTCCAGAGATTCAGCCAGGTTTT ACCTTTAACTGA

Coding sequence (CDS) from alignment at Sc0000026:1342871..1344582+

>Blg00184.0 ID=Blg00184.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=699bp|location=Sequence derived from alignment at Sc0000026:1342871..1344582+ (Branchiostoma lanceolatum)
ATGACCGTAACGGTTTTCCCGAGGATGGCTCTTCCACATACCGCAAGGGT
TGCAGCTCTTCCATGCACCCCACCCACGCATGCCATCGGCGCAGGCCCAG
CCGCTGGTGTGGAACCCGACATCATCGAGCTACGAGAGGTCCAGCAGCTC
GCCACCAGGCTCCTCGGGATCCAGTTCCTCGAAGCAGACGACGAGGCTGA
GGAGACCGCGAGGTTAGGCAGGGTGCGAGACTACGAGCAGCAGTTGAGAG
CAGCCCGCTTTGAGAACTTTGCCAACGACCTAGACCATCTCCGTCCCCTG
GGTGAGTTCGTCTCGGAAGATCTCGCGAGAGGGAGCGTGATCATTCTGAT
TGGTCACCCTGACGGCCATGATAAGAAGGTGGAGTTCTGTGCTGTAGAGG
GGGTAGACAACAGTCGCACGGTTTGTGTCAATTTCGGCAATCCTTTTGTG
CAGGCACAGACGATGACGTACCACGTGTCGACCTTTTTTCACGGTTCCTC
AGGGTCCCCCGGGTTCGATAAGGATGGTTGCCTTGTGCTGATGCACTCGC
GGGGCTTCTATCCGTACCAGGGCGCGCAGAGTACCATCGAGCAGGGCGTT
CTGCTCTCCAGCGTCAAGGCACATGCAAAGCGATCCCTTCCCGGAGACAC
AATCCTGGAAATTTTTCCAGAGATTCAGCCAGGTTTTACCTTTAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00184.0Blg00184.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00184.0-exon-Sc0000026-1570713199:1342871..1342893Blg00184.0-exon-Sc0000026-1570713199:1342871..1342893Branchiostoma lanceolatumexon
Blg00184.0-exon-Sc0000026-1570713199:1343567..1343817Blg00184.0-exon-Sc0000026-1570713199:1343567..1343817Branchiostoma lanceolatumexon
Blg00184.0-exon-Sc0000026-1570713199:1344158..1344582Blg00184.0-exon-Sc0000026-1570713199:1344158..1344582Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1342871..1344582 +
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00184