|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:2595285..2598817+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00180.3 ID=Blg00180.3|Name=Blg00180.3|organism=Branchiostoma lanceolatum|type=mRNA|length=3533bp|location=Sequence derived from alignment at Sc0000026:2595285..2598817+ (Branchiostoma lanceolatum)
CAGCAGCTGGTTATATTACACCGAACGGTCTGTTACACCTAGTCTTTGCA
TATCTGCCTGCAACCGTTCTTTAAAGCTACTTAGTGAAGATGCTCCTACA
GTACTTGATGACAACGAGTTCCATTCTACTGTGATTCTCGGAAAATACGA
ATTTATGAACACATCAATCCTTGGCTGATAACTCTGGTACTTAAAAGCAT
GACTATTTCTTGTCCTCTTCTGAGCTGGCATTATATACTTATCAGTCGGT
ACGTCTACAAGTTTATTAGTCATTTTGTACATAATGCAAAGTCTGGACGT
TGTTATTCTGTATTCAAGTGACATCCATTGCGGATCTGCTTTCATTTTGG
TGACACTAGCACCCCTGTCAAAGTTGTTCGTGCAGAATCTGGCAGCTTGG
TTCTGCACCCTCTCCAGTTTATCTTTATCCTTCTTTGTGTATGGATCCCA
AGCTGTTGCTTTGTTGTTAAGTGGTGACCTCAAGTAGAAAAAAACACACA
CAGACGAACTAAACACAGAGGCTTAGTTAGAAATTTCCATCGACTAATAG
ACTAAGAAACACAAAATATGACACAATTATAAGTTTTCCAATACCTAATG
GCCATATTAACAAGTTTCGTTCCTCTTAGTCTCTAGCAAATTAGTAAAAA
AAAAAACCTTTGACGAGCACACCGGATATTCAGAACGCTGACGACCTCTT
TGAAATCAACCGGCTCCACTATCATGATTCACTCCCCTCTAGTACAAAAT
GTACCTGTAAACGAGAAACTATTAGCAGTTCAGAAATAACAATATAGCCG
GCCGTGCTAGGTACTCATTTCACCTGAGTCGAGTGAGGGAGGAAGTTGGT
GCAAAGTGCCTGTTCAAAGGGAAGAATATTGGGATTGAAACCCGGTACTT
ATAGATTTTAACTCAACAACCCTAACCATTGTTGTATCTATCTCAGGTTG
GCATCTGCTTGGCTCAACAAGTTCGTTAATATGCCAGCACATAGCGGCAC
TTTTGGCTGGGTCAAGGGCTTAAATAATCGTCTCAGAAGCTACCAAGATC
TCAACCCAACAGACAAGGTATGAGACATTTCTTGATAATTAACGACATGA
AAAATGAAGGTATAGTTTTTGGCGTGTCTGCCTGTGTATCTATTTTGTGT
ATCTGTGTATGTTTCCGGATTTTGTAGTCAGCATAAATATATGATATTTG
ATATGTGGGTAGGTCTTGGAAAGACAAAGTTCAAGGTCGATTTTGGGCCA
CCTGGTATGTGACCTTGGTACTGCAGTAGAACTTGTTGTTTTTGTATCTT
TTGTTCTGGACGTGCTATCTTTTTTTTTGTTAGTTAGCTTGTGATGTATA
TAAGAAGTGGTGTAGGTTTGGGCCCCATAGCAGCTTGCTTTGGAACTGCT
GGGGCGTTTTTGTCAAGGAATGAGTAATCCGCCACTTCATGGACGTCACA
TTATGAAAATAGGACACATGACTCGATGAGTAGTGGATCGTAGGTTGCAG
AAATCTTATGGAGTTTATTTAGGGATAGTTGTAATACCCTGGTGTCTATG
ACTTCTTTTGCTCCTTCTAACATAAGAAAATGTATTTTATGTATTCTAGG
TAAGCGAACTGAAGGAAGAACGGGCATTTGACGCTAAACAACCAGTGCCG
TTCCGAAAGTTCCTTTTTGCCGTTTCGAAGCATCTAATGGAAAATGAGCA
CTGGCTATCATTCAACAGGCTATGCCTACCATGCCAGGTACTTTGTCACA
CTCACTCACTCACTCACTCACTCACTCACTCACTCACCCACTCACTCACT
CACTCACTCACACACACACACACACTCACTCACTCACTCACTTACTCACT
CACTCACTCACTCACTCACTCACTCTCTCACTCATTCACTCACTCACTCA
CTTACTCACTCACTCACTCACTCATTCATTCACTCTCTCACTCTTTCACT
CACTCACTCACTCACTCACTCACTCACTCACTCACTCACACACGAATATC
AAGTTAAGGAAAGGCCAAGAAAATTAATGCTTCTTGTGTATATGAATTCT
AATACAGATTTTCCCCACTAGGTTGACTACGACTTCATAGCCCACACGGA
CACACTAGCTTCAGATGTTCGACTCTTTCTAAAGAAGAACAACATGACAG
CGAATGAAGACGTTCTCCCTGAACAGCTGCCCAGAAACGCTAATGAAGAC
AATGTTTTTAGCGACATCTACCGTCAAGTCCCAACAGAAGAAATACTCTC
TCTCCGCGAGACCTTCCAAGAGGACTTTAACATGTTCGGATACTCTTTTG
AACAAGATTTGGCAAAGATACTTACAGGAAAGGCAATGGGGTAGTCTCAA
AGCTTCTTCGCCTTGGAATTGCACTCCTTTAGCAGCAACGACAACTGAGA
CGGGCAAATGATGAAAGTGTTTCATCAACATATTTTGGCAAGTCCCGATA
GAAGTAATACTGTCAATCCGGAAAACCTACGACGAGAAAGACGATTTGAC
AAGAATACTCGTAGAAAGGGCACAGGGGTAGTTTAGTATGTTGACCTTGA
TCTTAAAAAGGCTCATATAAGTCTCATTTGGTTGATTTTCTGTAATCATT
TTCAGAACTTGATTTTATGTAAAGACAGAGACACTGTCTGTCTGTTTGTA
CTACATTGTTTTCAATTGTTCCTTTATCTTTACTTCGCAAGTCAATTGGA
AGGCAAAGCTATTTTATAGCTATTCTTTATACTTATTTAAACACTAGTTT
GATTTTACATTGAATGATCTATGTTGGTAGAAGGGATTATCCACGCAAAA
TCATTAAAGAAACTTGTCAATAGTAATTGTTAACGTTATCACACTTGCAT
TCTCAGTTTTGGAGAGGCCAACGAAAGACAACAAGGTTCTGACCTCCCCT
GTCCGCTTTTCATTGCTATCACGTGCGAATGAACAATATGCAAAAATAAG
AATATATATACAATTTAAGAAGTGATGATTTGTGTCAAGTGGAATGCTTG
CCTATGTGTGAAAACAGAATAGGATCTATCTGTTCCCGCCTGTCGTCACA
AAATTGCCGATAATATGTCATCTAAAAGTATTGAATTATGCATATGGCGG
ACGACATGAACTCCATAGGAAATTAAAGTGAGATGCTTTGTAGAAGTGAA
TGCCCTGCCCTATTGGACTACCGGCAGCCGTGTCAGTAAAGACGAGTTAA
ATCTTTGCGGAAACTAGTAGTATAAGTGATATGTTAATTTCGAAATGTTG
AATTACCCATATACATGTACATGCGCGTAGGTTAATTCCTTTGTTTACAT
GTTTAGTTGTAGAAGACCTCACGAAAGACTCCTGTACTTTTGTTCAGTTA
GTATAATAAAGATTGTCAGGTCTTTATAAATGAAGGGCAAAAAAGGGGAG
AAGAAGAATAGTAGGAAGATGTCGTTATCATACCTGCATACAAAGCTGTA
CGTGCATGGGGTATCAACCAGATGAAGAACACCGATATGTTAAATCTAGA
CAGAGACAGAGTACTGGAGATTCTTTTTACACA Coding sequence (CDS) from alignment at Sc0000026:2595285..2598817+ >Blg00180.3 ID=Blg00180.3|Name=Blg00180.3|organism=Branchiostoma lanceolatum|type=CDS|length=498bp|location=Sequence derived from alignment at Sc0000026:2595285..2598817+ (Branchiostoma lanceolatum)
ATGCCAGCACATAGCGGCACTTTTGGCTGGGTCAAGGGCTTAAATAATCG
TCTCAGAAGCTACCAAGATCTCAACCCAACAGACAAGGTAAGCGAACTGA
AGGAAGAACGGGCATTTGACGCTAAACAACCAGTGCCGTTCCGAAAGTTC
CTTTTTGCCGTTTCGAAGCATCTAATGGAAAATGAGCACTGGCTATCATT
CAACAGGCTATGCCTACCATGCCAGGTTGACTACGACTTCATAGCCCACA
CGGACACACTAGCTTCAGATGTTCGACTCTTTCTAAAGAAGAACAACATG
ACAGCGAATGAAGACGTTCTCCCTGAACAGCTGCCCAGAAACGCTAATGA
AGACAATGTTTTTAGCGACATCTACCGTCAAGTCCCAACAGAAGAAATAC
TCTCTCTCCGCGAGACCTTCCAAGAGGACTTTAACATGTTCGGATACTCT
TTTGAACAAGATTTGGCAAAGATACTTACAGGAAAGGCAATGGGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00180.3-exon-Sc0000026-1570713199:2595285..2596351 | Blg00180.3-exon-Sc0000026-1570713199:2595285..2596351 | Branchiostoma lanceolatum | exon |
| Blg00180.3-exon-Sc0000026-1570713199:2596884..2597021 | Blg00180.3-exon-Sc0000026-1570713199:2596884..2597021 | Branchiostoma lanceolatum | exon |
| Blg00180.3-exon-Sc0000026-1570713199:2597356..2598817 | Blg00180.3-exon-Sc0000026-1570713199:2597356..2598817 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:2595285..2598817 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00180 |
|
