Blg00179.0 (mRNA) - B. lanceolatum

Overview
NameBlg00179.0
Unique NameBlg00179.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2743505..2745868+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00179.0 ID=Blg00179.0|Name=Blg00179.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2364bp|location=Sequence derived from alignment at Sc0000026:2743505..2745868+ (Branchiostoma lanceolatum)
ATGCTGCAAGTGGCTGGGCACTCCGACAGAAATGGCAAACTGAAACCCCT TCCCGGTCTTGACCAGCTCCGCATATTGGTGCTGGGGCCTGGTCACATAA TAACTGTGGAGCGTGCCACACTCTCTGTCGTTCCCAACCTCTGGGGACTG TCCATGGGCAAGAACGTGATCAAAACCGTTGGAAGCTGGTTTGGCGGTAT CAGGATGCTCGAAAAACTCATCCTATCTTGGAATGAAATCGACGAAATCA AGGAGAACGCTTTTCAGTCATTGGTTCGGCTGGAGTATCTTGAGCTGAGG CACAACCATCTTCGTGCTGTGGAAGAGTGGCACTTTGCAAGCCTGACCAA CCTGCGGGTTCTGCACCTGAGCTACAACAACATCTCACACATAGCTGGAA ACTCATTCAACCGCCTGTCTAGGCTAGAAACTCTATGCCTGGATCACAAC AAGCTGTCGTCTCTAAGCAACCAATGGCTACAAGGGTTATCCACTGAAAA AGTCTTCTTCAAACCATTTGGAATGCGTGTCTTAAATGTTGATGAGAATC CTTTCCGTTGCACATGTGCGCTTGGCAACTACAATTCCCTGGGTAGTCTT GTCGATAATTGGCGTGAGCTGAAGTGCAGGTACCCACCTAGCCTCTCGGG AAGAAAGATTGCCGGCGTGTCTAATGAAGAGATGCCGTGCCCACCACCTA CAACCATGACATCACGTCAAGATCACGGAGCCACTCTCGTGTGTGAAGTC TTCTGGGAGAAGCAGCCAGAGATCAGGTGGCTGGATCCAAGCGGGAGGGT CGTTGGAGAAAGAGGGTCACTCGATCCTTGTGGCGGCGCTGTAACAACAC GCTTGGAGAATGAGTGTCCGACCACCCAGTCTCCTGGACCAGGAACGACG CACTCAACGTACTACACTGGCCTACCCTACATCGGCAAGTCCACCTCCAC CCTCCGCATGAGTCAGCAGGCCTACCGGTGCTGGACGGAGGGCAGTTTTC GTTGCGACGTGCAGTCTGCAGCAGGCAACGTCTTTGCAAATATACCGCTG ACCAAGTCAAGTGAAGAAAGCAAACAAGACCAGCGGCAAGAACACACTGT GACGGCAGCCGTCTACACCACGACACCTGCCCGGCGAAACGCAAAGATGA CGGTAAGGATCGTCAAAACTACGGACAAGAACGCACCACAGGATGGGTCC ACTTCGGCAGCTGATAAGGCAAAACGGCCTACCGGGATGACAGCTGCCTA CACTTCCAAACCGACCCGGCAGATTGGAAGGATGACAGAAAGCATGAGCA AAACCACGGGGAAAAATCCCACGCAGGATGGCACTACTCCAGCAACTGAC AAGGAACAACGGCCTACCGCGATGACAGCTGTCTACACTTCCAAACCTAC CCGGCAGAATGAAAGGATGACAGAAAACATGAGCAAAACCACAGAGAAGA AGCCCCAGCAGGATGGCACCACTCCAGCGGCTGATCAGCCACAACGGCAC ACGGTGATAATGATAGTTATCTACAGCACAAGCACATGTCTTGCGCTCTT CTTTCTGTACAGGGTGGCGGCCTCGTGCCGCAGGTGCTACAACAAGCGAC TAATTCAGCGTCACTACTTACATAGCAATGCTGCAGGCGCTATCGGGGGC ATACCACTGCAACAAATCCAGCCACGGCCCGCTGATGGCCCCGCGACTGG GAACCCTCTTCCTCCGCACCAAACATATGCTGAGATCCCCGACGACACCC CCATCGATCCGTATGCGGAAACGACGCGCTTGGAAAATCCAGCGTATGCC GCAAACGTGTCAGGACCAACAACTGCAGCATCGATCTCGAATCCTCGTCC GCGATCCAGCAGGCCCCCCAACCCCCTGGCATCATCACAGCCACAAGGCT CAAGCACAACTCGGACGGGGAATGCACCTGTTCCACTTCCAAGGCCAGTC GACTCTACCTACTACCCACCAAGCATGAAGACGACTCCAGCAAAGGAGAT CCCGGATCCTCTTCCCAGAACCAACAGAAAGGTTGACTCAAATGTCTCCC CACAACCACAAGGATTGGAGATGCCTCAGGCACAGAAGGTCCTGGATCCT CTTCCACGGACTCACACGTACGTCAGCTCCAATGTATCCTCACAACCGCA TGGCGCGGAGATGCCAAAACAAATGCCATCATCCGGGGCCTCATCGCACT CTCGAAGCTCAAACCAAGAAGAGGAAGTCGAGGGTCTCAACATTTACATT GACCTGAAAGGCCAACCGCGCTACTCTGGCTCGGAGATGTCTCAAGCAGA AGACGTTCCATGTCTTCTTCCTCGGACTCACACGTGCGTCAACTCCAACG TCTACTCACAATGA

Coding sequence (CDS) from alignment at Sc0000026:2743505..2745868+

>Blg00179.0 ID=Blg00179.0|Name=Blg00179.0|organism=Branchiostoma lanceolatum|type=CDS|length=2364bp|location=Sequence derived from alignment at Sc0000026:2743505..2745868+ (Branchiostoma lanceolatum)
ATGCTGCAAGTGGCTGGGCACTCCGACAGAAATGGCAAACTGAAACCCCT
TCCCGGTCTTGACCAGCTCCGCATATTGGTGCTGGGGCCTGGTCACATAA
TAACTGTGGAGCGTGCCACACTCTCTGTCGTTCCCAACCTCTGGGGACTG
TCCATGGGCAAGAACGTGATCAAAACCGTTGGAAGCTGGTTTGGCGGTAT
CAGGATGCTCGAAAAACTCATCCTATCTTGGAATGAAATCGACGAAATCA
AGGAGAACGCTTTTCAGTCATTGGTTCGGCTGGAGTATCTTGAGCTGAGG
CACAACCATCTTCGTGCTGTGGAAGAGTGGCACTTTGCAAGCCTGACCAA
CCTGCGGGTTCTGCACCTGAGCTACAACAACATCTCACACATAGCTGGAA
ACTCATTCAACCGCCTGTCTAGGCTAGAAACTCTATGCCTGGATCACAAC
AAGCTGTCGTCTCTAAGCAACCAATGGCTACAAGGGTTATCCACTGAAAA
AGTCTTCTTCAAACCATTTGGAATGCGTGTCTTAAATGTTGATGAGAATC
CTTTCCGTTGCACATGTGCGCTTGGCAACTACAATTCCCTGGGTAGTCTT
GTCGATAATTGGCGTGAGCTGAAGTGCAGGTACCCACCTAGCCTCTCGGG
AAGAAAGATTGCCGGCGTGTCTAATGAAGAGATGCCGTGCCCACCACCTA
CAACCATGACATCACGTCAAGATCACGGAGCCACTCTCGTGTGTGAAGTC
TTCTGGGAGAAGCAGCCAGAGATCAGGTGGCTGGATCCAAGCGGGAGGGT
CGTTGGAGAAAGAGGGTCACTCGATCCTTGTGGCGGCGCTGTAACAACAC
GCTTGGAGAATGAGTGTCCGACCACCCAGTCTCCTGGACCAGGAACGACG
CACTCAACGTACTACACTGGCCTACCCTACATCGGCAAGTCCACCTCCAC
CCTCCGCATGAGTCAGCAGGCCTACCGGTGCTGGACGGAGGGCAGTTTTC
GTTGCGACGTGCAGTCTGCAGCAGGCAACGTCTTTGCAAATATACCGCTG
ACCAAGTCAAGTGAAGAAAGCAAACAAGACCAGCGGCAAGAACACACTGT
GACGGCAGCCGTCTACACCACGACACCTGCCCGGCGAAACGCAAAGATGA
CGGTAAGGATCGTCAAAACTACGGACAAGAACGCACCACAGGATGGGTCC
ACTTCGGCAGCTGATAAGGCAAAACGGCCTACCGGGATGACAGCTGCCTA
CACTTCCAAACCGACCCGGCAGATTGGAAGGATGACAGAAAGCATGAGCA
AAACCACGGGGAAAAATCCCACGCAGGATGGCACTACTCCAGCAACTGAC
AAGGAACAACGGCCTACCGCGATGACAGCTGTCTACACTTCCAAACCTAC
CCGGCAGAATGAAAGGATGACAGAAAACATGAGCAAAACCACAGAGAAGA
AGCCCCAGCAGGATGGCACCACTCCAGCGGCTGATCAGCCACAACGGCAC
ACGGTGATAATGATAGTTATCTACAGCACAAGCACATGTCTTGCGCTCTT
CTTTCTGTACAGGGTGGCGGCCTCGTGCCGCAGGTGCTACAACAAGCGAC
TAATTCAGCGTCACTACTTACATAGCAATGCTGCAGGCGCTATCGGGGGC
ATACCACTGCAACAAATCCAGCCACGGCCCGCTGATGGCCCCGCGACTGG
GAACCCTCTTCCTCCGCACCAAACATATGCTGAGATCCCCGACGACACCC
CCATCGATCCGTATGCGGAAACGACGCGCTTGGAAAATCCAGCGTATGCC
GCAAACGTGTCAGGACCAACAACTGCAGCATCGATCTCGAATCCTCGTCC
GCGATCCAGCAGGCCCCCCAACCCCCTGGCATCATCACAGCCACAAGGCT
CAAGCACAACTCGGACGGGGAATGCACCTGTTCCACTTCCAAGGCCAGTC
GACTCTACCTACTACCCACCAAGCATGAAGACGACTCCAGCAAAGGAGAT
CCCGGATCCTCTTCCCAGAACCAACAGAAAGGTTGACTCAAATGTCTCCC
CACAACCACAAGGATTGGAGATGCCTCAGGCACAGAAGGTCCTGGATCCT
CTTCCACGGACTCACACGTACGTCAGCTCCAATGTATCCTCACAACCGCA
TGGCGCGGAGATGCCAAAACAAATGCCATCATCCGGGGCCTCATCGCACT
CTCGAAGCTCAAACCAAGAAGAGGAAGTCGAGGGTCTCAACATTTACATT
GACCTGAAAGGCCAACCGCGCTACTCTGGCTCGGAGATGTCTCAAGCAGA
AGACGTTCCATGTCTTCTTCCTCGGACTCACACGTGCGTCAACTCCAACG
TCTACTCACAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00179.0-exon-Sc0000026-1570713199:2743505..2745868Blg00179.0-exon-Sc0000026-1570713199:2743505..2745868Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00179.0Blg00179.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2743505..2745868 +
Properties
Property NameValue
GeneIDBlg00179