Blg00170.0 (mRNA) - B. lanceolatum

Overview
NameBlg00170.0
Unique NameBlg00170.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1382543..1386948-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00170.0 ID=Blg00170.0|Name=Blg00170.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4406bp|location=Sequence derived from alignment at Sc0000026:1382543..1386948- (Branchiostoma lanceolatum)
CCGCCGGCGGCACCTCGCGAGTAACCGGCCGCACTTCCTGCTCAGCTCGT AGTCGCCTTTCCTTATCGTGAATTCTCTTCCGCCGGCTCCGATTATTGTT TTGCCTGCTCAAAATCTTGAGTTTGAGAAGCATCAACAACGATGAACGAT CCAGACAACTTAGACAAGGTGGTCAAAAAAGAGGTAAGTTTTCAGATTCG TGAACCTTTGACTCATGTGGCGTCGTATGTAAAAGCAAGATATGATACGG CCCTTTGTCGGTTCGGCCTACTCTCCAAGCGAAAATCGGCATTAAAGAAA GATTGTGACCGTCTTATTATAGGCCCCAACAACTGTCAAAAACAAATATG ACTTGTCAAAAATAGGTCTGATTTGTCAAAACAGATCTGATTTGTCAAAA AGTAGAGATATAGTTATTTGTCAAACACAGCTTGTGGGCCAGCGGAGAAA ATCACGTGGTATATGAAAGAAGGTCACAGCAATTTCCCTTACCAACCTCT CAGACTGAAGACGTACTAAGCTTGGCCCAGTCAACACGGCCAAAAAGCAG TGGTCAACTCGGCTCAGAGAGTTAGGATGTTGGCCAGACCAGGGTGTTGG GCTGAGTTGGTCTGATTTAAGTCTTGGGCCGGAAGCGTCCGACTTCCGGC GTATTCGAAAACCAGGTCATATTGATATAAGGGTCTAAGGGTCAGGCCTC TACGACAGCAACTTTAAGACATTCTTTGGGCAGTTGTGTATTTGTCTTAC GCATTTTAAGTGTCTTGAGGCGAAAAAGGGTGTGGTAAGATCATTGTTAT AGGTTTGTTTGCTTCATAGCCTAGCAGAAAATAAAACCACAAAAATGTGA CGAATTTGACCACTCTTTTTAAATTAGACATTCTAAGAGAACTTTTAAAC CGATAATGATAACAATAATCGTCTTTCTGAGCTTGACATCGATTGATCAC TCGTTCTAGAGCGATCCAATTGTTTGTACAAAATCTTCACATGACCAGAA AACGCTGGAGTGATTTGACAAATAATCAATCGTGGTGTGTTGACTTTAAC GGTAACTGGTTCAAACTCCTCGGTTGATCAAACAGTTTATACGGCAATTT AATATTTTGGAGCCTATCGATTGGTCATTCCGCTGTGTAACACCAGGGGT TAAGCACTAAATGAGTCACTGACCATGAAAAACTGACTGAGCGCTAATTT AAATGTGGGAACTGTGTTCGCTTATATGTAGAGCGTTATCGGCCGTTTAA ATTCCACGGCGAATTCATAGCCGGACCGCTTAAATTCAACGCAGAGCGTA CTCGATACATTTTACATAAAGCGACGCCAAAATACTCGAATCTGATTCAA TACGCTGTGGCCTTTATTTCTGAATTCAGAGTAGAGCGTAGCTGGTACCC CTGTAATACAGGCCCCAAAATATGCACTCACATTGACGTTACATGTTGAT AGCTTAGTATTATTACTGACAATTAACACATAATACTAGCAAAGTTTGAA GTGAAGCCAGGATCTTTTATCTTAGATACATATCTAAAATACATGTATAA CCGGACATTTTACGTTGTCACCTTCACCGAGAGAGTTACTAATTTGATTG AATCGATATGTTTTTCCGTTGTTGTTTTGCGGCTGCGGTTTTGTTACTGA ACGGCGTCGCAACGATTTCTTTCCTGGCATTTTGAAAGTGGTTAGGGTTT GACATATTATTAAATCGTCCTAATAGTATCTTTGTACAGCAGCGATTGTT TGGTTCTTGTACCTCGTATTACACATCCAGCATATCGTGTAGTTGATCGG ATTTGGGCCTCCTAACGACTCTCTTAAGTACTGCAGTGGAAATTTTGGTT CTTGTATCTCATGTCTTGTCTTTTGATCGTTGGTAACGTCTGTGTGTAAC CTTGTGTTGTAACCTCAATGAATATAAATGTATTGCAACCATTTGGTGTG TTTGCGTTAGTTTTTTAAATTATTTTTTTTATTTTTTATTTTTTTATTAT TTTTATTTTATTTATTTTTTTAAAGCTTTTTTAGTTTTTTTTTTATAGTT TGTTAGTTTGTTAGCTTGTTAGTAAGGTTAGTTTGTTTGTATTGGTGTGT GTCCACAGTTTTGTCGCAGATCTCCAGTGGCAGCCTCCCAGGATGTAAGG CAGAAATGGCGCAATAGGATACTTGGAGAATTTAGTTTACTAGTATTGGC TTTGGTCCAATGTTATATTGGTCGTTAGCTGTACAAATTTGTTTTCTTCA CTTATTTTCTTTTAGATCGTGCCGTATGACAAACAGGCTGACGTGTTTTC CATCGACCATCACGACCAGAAGTGTGTCATCACGCTTGCGCAGTTCTACT CGGAGAGGGTGGGCAGGTTCATGTGGATCAATGACCGGGGGGAGGTGCGG TGCGACGGGGAAGGAACCGACCACAGAAGTAAGGGGTGTTCTGAGTTTGT TCACGGTTGTTGTTGTGGGTTTTTTTTTGGGAGGGGGGGGGCGTTTATAC TTCCAAGCAGATGCATTGCATCTTCTTACAGGTTTAATGTATACCATTAC AGGTTTGACGTATGTGATGATTAGGTTTAAAGTATTATTATTTTTGCCAG CGTGGCATCCATAGCCATGGGCGCCACCATTTTGGATTTTGACGCCACGT AGGTGCCATTTTCTTTCAGATTCTCATTTGTGACGTCATGTCTACGCCCA CATCAACTATCGTTTTACTAGTATTCACTAGAAATATACATGCTTATACA AGTTATGTACTATGTACTACTTATTGTTTTTGATTGTTAAGGATCACACG AAAGTTCATGTACTTGAAATCTGTCAATATAATATTCTTGTATTAATCGG GACTATCGTTAACCCTTGCTTATGGTTTTGCTATCATGTAGAGCTTCCCT CCAGATATCTGCTTGGTGCTTATGATATTGATCAGTAAGAATATTGTTTA TCTTTGGCCACTGTTGAACGTTAAGTAAAAAATGATTTCTGTTTTATATG TGTTTTAAATTTCTTTCCAGTAAATGATATTTCCTATAAATTTTTCTTTC AGCTTTATTTAACTACTACGTCGGAGAAAACGAAATCGTCCGGTTTGTGT CCAGGGGAGGAAAATACAGGAACTTTGCCATTTCCATGACGAACGGAGAA CTAAGGCCTTTTCATGTAAGTTTGATTTTATTTTAGCTTCCGTTCCCTTC ATATCTTTAATGGTTGGCCTCCCCGAGTCCTTGAATGGGGATAAGTGACT AACTGAGTGACTTGACTCTCGCACGTGACTTCTCTTACCTACACACGCGA CTACCGTGTCTTTCGCACGTGACTACTCTGACTATCCCACGTGAATACTC AACTCACGCACGTGACTCCCCTGATACGTGCACGTGACTTCTTTGGCAAA CGCACGCGACTGCTCTAAATCACGCACGTGGCTGTAGTGATTCTCACGCG TGACTACTCAACTCACGCACTTTTTCTCACAGATTTTACCGTTTCTTTCA TAAACAAAACTAATCACTCTTTGTTTTTGCACCAATCAGACTGCAGAGCC CCCCAACTCGGACATGGGAGACCCGTCTACCCAGTTCGTCCGCGCAAGAG GCAGCGACTTCGACGGCCAGCTAGTGAAGTACCAGTCCAAGATAGACAGC AACCGCTATCTAGCTTTTGATCAGCAAGGCAACCCGCAGCCACTGGGTTT TACCTCCAACGCCGCAGTTGCGGGAGAGTTTATTTGTTGGAACGTCACTG TAGAAAAGGAAACGGCGCTGTAAAGAATGAATTTGACATTCTTTCACACA AAATTAATTGCAAATATGCATTCTTATTTGCCAATCATTTTTCGGTAGTT TATTTTTTATTTTTACATTCCTCAGAGCATTCAAAATCTATTACAGATAT GAACCGGGATGATGGGAGATACCACGTTTGGGATCTCTCTTTTTTTACCG CTGCGCCACTTAGTGTCAAAAAGTAGCTAAGTCATTACTATCCCGAGTAA TAAAAGCAAAAGAATTACCCAAACTTTCAAACTAAGGTAAAAACAGTTTG GTCATATGTAAGAACAACACTATTCTTTTATGAAACTGTTATGTATTTAG TAATACGGTTTCTGCAAAGTGTCTGACTAAAATCACAAAAAGTACTCATT CTTTTTTAAACATCATGACTGAACAACATAGAAATTAATACGCAATCGAT TGGCATCAAGAAAAATACAGCTTTAGTAACACCTAAGAATTAATATCATT GTTATTGTTGCTGCTGCTGTTCTTTTTTTAAAAGACGATTTCGTCATTCT TTTTCGACAGTGACATATTATGCTTAAATACAACGGCACGGTAACGATGT TGTAGTGGGATAGATAAAAATATAATTGTACACGCAGTAAACTATTTCGT AGCCTT

Coding sequence (CDS) from alignment at Sc0000026:1382543..1386948-

>Blg00170.0 ID=Blg00170.0|Name=Blg00170.0|organism=Branchiostoma lanceolatum|type=CDS|length=552bp|location=Sequence derived from alignment at Sc0000026:1382543..1386948- (Branchiostoma lanceolatum)
ATGAACGATCCAGACAACTTAGACAAGGTGGTCAAAAAAGAGATCGTGCC
GTATGACAAACAGGCTGACGTGTTTTCCATCGACCATCACGACCAGAAGT
GTGTCATCACGCTTGCGCAGTTCTACTCGGAGAGGGTGGGCAGGTTCATG
TGGATCAATGACCGGGGGGAGGTGCGGTGCGACGGGGAAGGAACCGACCA
CAGAACTTTATTTAACTACTACGTCGGAGAAAACGAAATCGTCCGGTTTG
TGTCCAGGGGAGGAAAATACAGGAACTTTGCCATTTCCATGACGAACGGA
GAACTAAGGCCTTTTCATACTGCAGAGCCCCCCAACTCGGACATGGGAGA
CCCGTCTACCCAGTTCGTCCGCGCAAGAGGCAGCGACTTCGACGGCCAGC
TAGTGAAGTACCAGTCCAAGATAGACAGCAACCGCTATCTAGCTTTTGAT
CAGCAAGGCAACCCGCAGCCACTGGGTTTTACCTCCAACGCCGCAGTTGC
GGGAGAGTTTATTTGTTGGAACGTCACTGTAGAAAAGGAAACGGCGCTGT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00170.0Blg00170.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00170.0-exon-Sc0000026-1570713199:1386766..1386948Blg00170.0-exon-Sc0000026-1570713199:1386766..1386948Branchiostoma lanceolatumexon
Blg00170.0-exon-Sc0000026-1570713199:1384521..1384683Blg00170.0-exon-Sc0000026-1570713199:1384521..1384683Branchiostoma lanceolatumexon
Blg00170.0-exon-Sc0000026-1570713199:1383784..1383896Blg00170.0-exon-Sc0000026-1570713199:1383784..1383896Branchiostoma lanceolatumexon
Blg00170.0-exon-Sc0000026-1570713199:1382862..1383409Blg00170.0-exon-Sc0000026-1570713199:1382862..1383409Branchiostoma lanceolatumexon
Blg00170.0-exon-Sc0000026-1570713199:1382543..1382829Blg00170.0-exon-Sc0000026-1570713199:1382543..1382829Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1382543..1386948 -
Properties
Property NameValue
GeneIDBlg00170