|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:658417..666587- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00169.5 ID=Blg00169.5|Name=Blg00169.5|organism=Branchiostoma lanceolatum|type=mRNA|length=8171bp|location=Sequence derived from alignment at Sc0000026:658417..666587- (Branchiostoma lanceolatum)
GTTTTTAACCTCACTGCACACTGCAAAGCTAGGGTCGTCCATTTTGTCTC
ACAGGTGAGAATATGTTTACTGTTCAGATTCTACATTTTATACAGGTTTT
ATACAGGAATGAATGAAAGAAGGCTACATGGAAAATTGCGAGGGCCTGCA
TGCCATTTCGTAAGGCGTAATTCAGCCTTTTTCGTCTTCGTAATCCGTAG
GCAGTCGCCCCGAATCAAAACACAATGTGGGGTTCGCGATGAGCAAAGGA
GCCTTCTAAGAAAGAAGACTTTGGGTAGAATAATGGCTAAGCATGCATTA
TCAGGAGGCGACTGATTTTATGCCTATATATTCAAGTTAAATAGTACTGA
CAGGCCTTCTAGCGTAGACTCTACCACCCTCTGCGGGTCGCTGGGAAAAT
AGTAGAAAATGGCCAAATAGAGTCAACTGTATGAATGGGGTCGGCTATGG
AGATAGGGTCCAATATTGCGAATGCTACCCTCCATGGCCAAAGTCCCCCG
GCAAATGTTCTCCCTATATATATAGCCGGCGCGGTTAGTCTGGTAGAGAC
TACTTCTGGCGGGTGACCTAGTTTTACCGGGAGCGCTCCTCATGGGGCGT
GCCTGGAGGGGAGACTAAACAGTTACAATGAATGGCAGTAATGCATGTAG
CCCTATGGGTAAGTTAAGAGAAAGAAGGTGTCATTATCTCAGGAATCAAA
ACATCAGCAAACACTTACCCTCAAATACTAACCAGTTATGTCAACTGCCA
TTAGATTCATTCCTGACAAATTCCATACGGCTATTCTCCAGATATACCCC
CCCCCCCCTAAACAGAGCCCTTGGATAGGTCCAACAGGCTTCAGACACCC
AGTTGAAGACCATGCCACTATATCAGGGGGGTGCCAAAACCCACAAGGTA
GAGACAGACCATTTATTTGAACTAATTCAGCAAATACAGAGTCTGTCCTA
CCACAGCCACTGCTATACTGCCCAGATTTCACAAAAATCCCACCAAAAAA
GGATTTTCAATGGTTTAAACCCTGTTTTTTCTTGGTCTCTCATCGTGGGG
TCTGGGCGCAGGCGCAATCCCTTTAGTCTCCCCTGGAGGACCCAGACACA
TGTGAAACTTTACTTGGCCTGGTGTAGAAATCAGGGCTTTGTTTTGGGGC
CTAGGTTTGATAAAAGCCGATTGATATGTCGGTTATGAAAATAAGGACAT
AATTTGCTTGATATCGATTGATGAAAGAATGCCATGATTCTAACGTTGTA
AATAACGGTAATTTGATACTTGCATTCGGAAGTTAGATGATTGTGAACAT
CATCATGTAAGTATTCAATCCATAACACACCTTTCAAACACATCTTTCAT
ACAAGTTAACACCATTCGGCGAAGGTATGGGTTCGCCGAACTCTAGTTTC
GTTACAGGAATATCTCTAGTTTCGTTGGCATGTAGCATCATGAATCTGCT
TACCTTTATTTTCAACACAGTTGTAAATACCGGTGTAAGATGTTGAAGCT
TCTGACGTCGAGTTCCCGGATTCTCTGTGAGAAGGGCTTGCCCGATTTGC
AGAAGCTGACAGCTGTAGTACCGGCAGTTATCGCAAGACGGCAACATTCC
CATACGGGCAATGGACCAGGTGCACCACCGGTGGGGAGTCCAGGTAAGGA
GGTTTTTTCGTTCGAGTGTAAGGTAAAGATTTTGCAGAAGCTGACAGCTG
CAGTACCGTCAGTTATCGCAAGAAGGCAGCATTCCCATACGGGCAATGGG
CCAGGTGCACCACCAGTGGAGAGTCCAGGTAACGAGTTTTTTTTTTTTCG
TTTGAGTATAAGGTAAAGATTTTACGTGATGACGAATGGAAGAGCACGTT
TTTGTTTGAGTGTGTAGTAAGTGTGTATGAATGTATGTATGCATGTATGT
ATGTGTGTGTGTGTGCATGTGTGTGTGTATGTGTGTGCGTGTATGTATGT
ATGTATGTGTGTGTGTGTGTGTATGTGTTTGTGTGTGTGCGCATGAGTGT
GCGTGTATGTATGTGTGTGTGTGTGCATGTGTGTGTGTGTGCATGTGTGT
ACGTGTGTGTATGTGTGTGTGTGTCAGTGTGTGTGTGTATGTGTGTGTGT
GTGTGTGTGTGTGCATGTGTATGTGTGTGTTTATATGACAGAATGCGACA
GAAACAGAGACACAGAGATCCATTTGAGATTTTCCTTGCTGTATGTACAA
CAGGTTCCCAGCCGAAGATTGACTTCACAGCTCGGCTCTTGGAAATGCGA
AACGGCCAAAAGGTAACGTCTACAACGGCTTATCAAAATTCCTTAAAGGC
AACAAAAGCAATATTAGGGCAAAAAATTGAAATGAAATGAAATGCTGACA
ACTTTATGGTAGTGACATTTACTAATATTGTTTAGCACATTTGCGTAATA
ACTTCATACTTTGAGCATTTTCAAAACCGCACAAAATCGAGCCTACTAAA
ACTCCGGCCACGATTTTAAGTGAGTTCTCACATTACAACAACCTTGTAGT
TTTGCATGATGGACGTTGCTATACATTGTGATAGTGTTGTTTGAACCAGT
CATGTATAGAAATGACTAAATAATTTGACTTCCAAAATCCGATTTTTCGG
ACCCTAATTTTGCTTGTGTTTCCTTTAAAATGAGAGTGATCCATGGACAT
GTCTAAAATAGCTACACATTAAAACTTTTCGATCACATGACATAAATTCT
TTGAATGGAATCTAAAGTATGGAGAATCATATTCCTCCTAACTTGAATGA
GAGGCTGATGTTTTTGCGTGTGTAAAAAAACGCGAGTGTAAATCGGGCCT
ATGAATATATCCTAACCGTCCCGCAGGTCCAGCCGACGTTCTCAGTGGAG
GAACTCCAGCGAAGGCTGAACCTGCTGCGTACTCTCATGGTCAGCAGTAA
CATAGACGCCGCCCTCTTCACGTCATACCACAACATTAACTACTACGGCG
ACTTTCTGCACACTGCTTTCGGCAGGCCTTACGGGCTGGTCGTCACCATG
GACAAAGTGCTCTCCATATCCGCAGGTACGTCACATCCGGTTTTAGGTGT
GTGCACTCACGTGACCGTGACGTAAGCATTGTCCGCCATACTGGATGGAT
AAGTTAAAAGTTAAAATCCTCCCACACCATAAGGTGAATAGGGCGGTGCC
CATCCCCGTTTCATAGCCCTGGGCCACACTGTGGTGCAATCACTGTAGCA
GGGGCTAGTCCACTGGCAGTGGAGTGTGTTTAACTTCCATACTGTTTCAT
AAGTATGTACCAATTTTATGAAAGTCTTTGGTATGACTCGATGCGCCTCT
TGTCCAGAGGTGTCCTACCCGGGAATTGAACTCGGGCCTTCTGGTTTCAA
GTAATCAGAGCCAGATGTGGTAAGTAACAGAAGCGCAGACCACTACACCA
CAGGGACGTAAATTTCGATTTCTGGGTGAGAATTTAGATTTGTATACCGC
ATGTCATTAAAGTCTATCTACGCAGGTATAGATCACTAATCTTCAGTGTT
TTAATAATGATATACAGCATACCTACGCAACATTTGGGACTATAACATAG
AGTCTAATGGGTAGAACAGGACTAGGCAGTTAGTTGCAAGTACAAAATGT
AGCAGTGATTATCTGCTTATTGATAGATAAAGTAATCACCTCCCACCACC
CAACTGTTCCCTAAAAACGTTAAAACAGAAAACAAAAAAAATTAGCGTGG
CAATTAAAAATTATTGCCATAGCGAAGGTGTCTGGGTTGATCTTACTCCA
CTGTAAAGAAAGTACCAACGTAGCACTCTTTAGTTCTGCCATGATAATAT
TAAACAAGTTCTTGTGATAATAAATCAACTGGGGTGGGTTTTAAACCCTT
TTCGAAACAAGAACACTAGCTAGATTCCGTGTAACCCCCTGACACGCTCC
CAATAGTACGAAATCGGACACCACGTAGGTAGGTCATCTGTCATCGACCT
GCGTGCTGGAATACCAGACCTTACTAACAAGGTATAGAGTGACAGGCGGC
GTCCGCGGACGGATTCCTGTAAGATTCCGGGAATTCTGGTGAAACGGGCC
TAAAACATACTATTAAGCTCGCTCCTGAAGCTTCGCTAAAAACTACGAAA
AATGTATTTCGTTCACATCCGGTGGGCTCGAAACATTTTCAGTTTTCACA
TTGAAAGCCGGCTTGTTTTTCCGTTTGAAACCTTGCAGCCGTTGACGGCG
GCCAACCCTGGAGACGGACACAGATTGGCGAGAACGTCATATACACCGAC
TGGGTGCCCGACAACTTCTACCACGCGGTCCAAAGAGAGCTAGCGGACCG
AGGCCTAATGACGCTTGGTGTGGAGTTCGACCACGTGACGCTAGATGGCT
TCACCAAGCTGAACCAGGCCGTACCCGACATGCAGAAAATAGACATAGGG
AAGCCCGCTATGCGCCTGCGCATGAAGAAATCGGACGAAGAGATCGCGCT
TATCAGGTGTGTATGTCCAATTTTTTTCTATGCATCGTCATGATTCGGAC
AGTTGTGCCACCGGAAAGCTAACATATCTACAACTTTATTGTATCTACAA
AAGCACAATAAGATCAAAATAATGTATCCTATTAGTATGAGATATATTCT
TTAATTTTGGAGACAAGCTTCTCAAAAGGTAAATCCCAAAGCTTCTTGAA
ACAAATAAGAGCTTTTCTTTATTGTTTCTGTTCCTTTATTGTTTCTGTTG
GTTTCTTTCCTACTCTTCTCCATATCCCTGTATCTGTGGTCCATTCCGCT
GCGGGATTGGAACAGAGAGGGCGCGCGTATAGCTGACCTGGGCGGGTGGG
CTGTGGTGGAGGCGCTAGAGGAGGGCGTGCCTGAGTACAAGCTGGCGATC
CATGCTAAAAACACCATGATCAATGAAGTGGCCAGGACCTACCCGCATGG
CGAACTCATGAACAGTCAGTATAAAATTACTTCCTTATATGGTGTTGGCT
GCATATGACGTCACGGCCGCCATATTGACTGGTTGAACCTATCGGTGTCA
GACCTATAGATTATGAATGTGTATAATGTGTAATAGTTATTTCTCTTTGC
CGAGGTATCATGCAAAGTTCTTGAGCATGTCATTAATGTTTATTTTTTCT
CTCTCTTTCCAGCTTGGGCTTGGATCAATTCAGGGATCAACACTGACGGG
GCACACAACCCTCTGACGTCACGGCGCGTGCGCAGTGGGGACATCCTGTC
ACTCAACGTCTTCCCCATGATTGCTGGGTATGACTCTAAACTTAATTGGT
TCACGTTTGTTTCGAAGTGACAACGTTAATATTTCAGTTGATGTTGATTG
GTCTAAACATTTTGCATGGCATTTGGGTCGACACGAAGTCTGGCCATAAA
GAAAACGGGGCAAAATAGAAAGCCCGACAAAACCGACTAAAAACACGCCA
AAACCCAGCCGGACACATTCCTATGTTTGGGGAGTAAGGTTCAGGACACA
TGCTGGATGGGTAAAACTGAGTTTCGAATTGAATTTGCAAATGTTCTTAA
AGGCATCCAGGGCATTTCATCAGGCTGGAAACTTGAAGAAAAAAATTACA
CATAGTAAGTTTCAATAACACTATACCATTACATATCGACATTAAAGGAG
CAAAGGTACGATGTCGGTGTGTGGTGAGAACTGAAAATAGAAAATCCAAG
CGCTAACAACAGACTGATCCTGACTGTCCCTCACAATTAGCGGTTGGACC
AATGAGAGTGTGACTGCATGTCGGTCAAATATTTGCATTTTCATGTTTTA
ATTTTGCATTTCTACCTTTTGACGGAGGTGGGCGGGGCTATGGTATCGGT
ATATTTACATTAGGCGCGTGAAACTAAAAGATCACCATGTAGCTTATTGT
TGTGCCGCTTTTGAGCACTTTTGACAAGAAATTCACACGCAAATGTGGTA
AACATGTGGCATTAAATGTCAATTTCATGAAGATTACAGCAACTAGAATA
TTTCCAGTTTTCAAGCCTCATAAAATGCTCTGGGTGCCTTTAAAGTAACA
TAATGATTACATGATACACATGGGAAATTTATTATGGGTTCATTTTTGCA
TCATTTTATCTCCTCAACACTAGTGCACTGTTGACATGATGTAATTCCTG
TTGACATCTCTGTCCCTACATTTCAGGTACTACACTGCCCTGGAGAGGAC
GGCATTCCTGAACCACGCCTCCGACGCCCACCTCGCTCTGTGGGAGAAAA
ACTGTCAAGTAAGCCTAGTTGCCATCTGGTCATGTCATATTCGTCATAGG
ACAGCTGGGTTTACAACACTGAAATTAATCGAATTGAAATTAAAGACTCT
TTGCACACAACGAAGTGTTATATTCCATCAGCGTTTCGGTGACCATCTGT
CACCTTCCTCATGGCAATTCGGACTTGTTCACATTGTACTGCAGCATAGG
TGTCGCTGCTTATAGATGCGGCCCCAAAAGTAAAGTATGCGATGTAAACC
AGTCAGAATATTCGTCCCGAGGAAGATGACAAACGGTCACCGAAACATTG
GTTTAATGAAACACTTGGCTTTGTACAAATAGATTTTCTATTCAGTATAC
ATATATACTTACCAAGCAACCTGATGAAATTCTATCATTAGACAATTTTT
GGGTACGCTGATATGATTTTTTCGACTTCAGTTCGTCGTCATCTTGTCCT
TGTGCGTTCCATTGTGTGTGTTTCATCAATAGAAAATTGGGGAAAATCAT
TGACTTAGACTTAATTTGGACCAGTCGTGGCATGATGTTTCGTAAACACG
TGTTCGACAACTATCTTGTGAATCGAAAAAGGCTGACGGCCATAGAGCTC
TGTCAACGGTCGGTCCTTTCAGTGACTTTCCTTAGTTCTGCCAAAGAATA
CAGGCACATTGTTCATTCCGTGATGGGTACTGTGCTTACATAGGTAAACG
TATGTGTTCTTGGTGTTAAACAACATAAACGCACACAAAATACCTGTCCT
TGGTGCTGAACACCACCCACAAAAAAGCATACCTGTTAAGTCTCACTTCT
CTACCGTTGTTCCCACCACGGTGACTACCAGGTACATCGGCGGGGTCTGG
AGCTCATCCGACCGGGAGCACGCTGCTGTGACATCGCTAAAGAGCTGAAC
GAGATGTACCGGGAACAGGGGCTGCTGGAGTACCACCCTATCGGCTACGG
ACACTCCTTCGGCGTCATGTGCACTTACTACGGCAGGGAAGCGGGTCGGT
GATAATGATTGTTGCCTGAAAATGGAGGTGTTGTTTTTAGTGTGTGTGTT
TGTTTGTGTGTGTGTGTTTGTGTGTGTGTATTTGTGTGTGTTTGTTTGCT
TGTGTGTGTGTGTATATGTGTGTGTATTTGTGTGTGTATGTGTATGTGTG
TGTGACTGTGTGTGTGTGTGTGTGTGTGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTGTGTTTCCAATTATTT
GGTGTTTGGGTAGGTATTCTGAATTCAAAGGGTTTTTTGCATGAGCGAAA
CGACCTATGTTTATCAAGTGGGTTGGTGCGAAGTCACTAACAATGGAGTT
AATGGGAACCGGTTTGGGATTTTGGGATAACATTTGGGTTAGCGTTCACT
CTGAATGAAGCGCGACACTTGACTAGAGTGGGGTCGTGTGGTGTAACGGC
AGGCTTTTCAACTCAGAACCCAGGGGTCCCGGGTTCGAATCCACCGATCT
TGTGCCCTTGGGAAAAGGGCACTTTACACGACCTTCCCCACTCGACCCAA
GTGTAAATAGCTGCTTGTGCCCCACGTGTATTGCACTGTTGCAATTCCAA
TAAAATCGAAGAAAATTCAAAGATCTAGAAATCCTTCTGAGTCTTCTTTT
TTCTGTTCTCGTTCCCAGATTTGGAGCTCCGTGAGGACATCCCGACCGTT
CTCGAGCCCGGGATGGTCATGTCCATGGAGCCGATGATCACGATTCCCGA
GGGCATGCCGGGAGCGGGCGGGTACCGTGAGCACGACATCCTGGTGGTGA
CGGAAGACGGGGCGGAGAACATCACAGGCTTCCCCCTGGGTCCCGAACAC
AACATCATCAAAAAGAAATAG Coding sequence (CDS) from alignment at Sc0000026:658417..666587- >Blg00169.5 ID=Blg00169.5|Name=Blg00169.5|organism=Branchiostoma lanceolatum|type=CDS|length=1212bp|location=Sequence derived from alignment at Sc0000026:658417..666587- (Branchiostoma lanceolatum)
ATGGACCAGGTGCACCACCGGTGGGGAGTCCAGGTCCAGCCGACGTTCTC
AGTGGAGGAACTCCAGCGAAGGCTGAACCTGCTGCGTACTCTCATGGTCA
GCAGTAACATAGACGCCGCCCTCTTCACGTCATACCACAACATTAACTAC
TACGGCGACTTTCTGCACACTGCTTTCGGCAGGCCTTACGGGCTGGTCGT
CACCATGGACAAAGTGCTCTCCATATCCGCAGCCGTTGACGGCGGCCAAC
CCTGGAGACGGACACAGATTGGCGAGAACGTCATATACACCGACTGGGTG
CCCGACAACTTCTACCACGCGGTCCAAAGAGAGCTAGCGGACCGAGGCCT
AATGACGCTTGGTGTGGAGTTCGACCACGTGACGCTAGATGGCTTCACCA
AGCTGAACCAGGCCGTACCCGACATGCAGAAAATAGACATAGGGAAGCCC
GCTATGCGCCTGCGCATGAAGAAATCGGACGAAGAGATCGCGCTTATCAG
AGAGGGCGCGCGTATAGCTGACCTGGGCGGGTGGGCTGTGGTGGAGGCGC
TAGAGGAGGGCGTGCCTGAGTACAAGCTGGCGATCCATGCTAAAAACACC
ATGATCAATGAAGTGGCCAGGACCTACCCGCATGGCGAACTCATGAACAC
TTGGGCTTGGATCAATTCAGGGATCAACACTGACGGGGCACACAACCCTC
TGACGTCACGGCGCGTGCGCAGTGGGGACATCCTGTCACTCAACGTCTTC
CCCATGATTGCTGGGTACTACACTGCCCTGGAGAGGACGGCATTCCTGAA
CCACGCCTCCGACGCCCACCTCGCTCTGTGGGAGAAAAACTGTCAAGTAC
ATCGGCGGGGTCTGGAGCTCATCCGACCGGGAGCACGCTGCTGTGACATC
GCTAAAGAGCTGAACGAGATGTACCGGGAACAGGGGCTGCTGGAGTACCA
CCCTATCGGCTACGGACACTCCTTCGGCGTCATGTGCACTTACTACGGCA
GGGAAGCGGATTTGGAGCTCCGTGAGGACATCCCGACCGTTCTCGAGCCC
GGGATGGTCATGTCCATGGAGCCGATGATCACGATTCCCGAGGGCATGCC
GGGAGCGGGCGGGTACCGTGAGCACGACATCCTGGTGGTGACGGAAGACG
GGGCGGAGAACATCACAGGCTTCCCCCTGGGTCCCGAACACAACATCATC
AAAAAGAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00169.5-exon-Sc0000026-1570713199:666534..666587 | Blg00169.5-exon-Sc0000026-1570713199:666534..666587 | Branchiostoma lanceolatum | exon |
| Blg00169.5-exon-Sc0000026-1570713199:664945..665117 | Blg00169.5-exon-Sc0000026-1570713199:664945..665117 | Branchiostoma lanceolatum | exon |
| Blg00169.5-exon-Sc0000026-1570713199:663563..663761 | Blg00169.5-exon-Sc0000026-1570713199:663563..663761 | Branchiostoma lanceolatum | exon |
| Blg00169.5-exon-Sc0000026-1570713199:662132..662399 | Blg00169.5-exon-Sc0000026-1570713199:662132..662399 | Branchiostoma lanceolatum | exon |
| Blg00169.5-exon-Sc0000026-1570713199:661674..661822 | Blg00169.5-exon-Sc0000026-1570713199:661674..661822 | Branchiostoma lanceolatum | exon |
| Blg00169.5-exon-Sc0000026-1570713199:661361..661475 | Blg00169.5-exon-Sc0000026-1570713199:661361..661475 | Branchiostoma lanceolatum | exon |
| Blg00169.5-exon-Sc0000026-1570713199:660380..660461 | Blg00169.5-exon-Sc0000026-1570713199:660380..660461 | Branchiostoma lanceolatum | exon |
| Blg00169.5-exon-Sc0000026-1570713199:659394..659556 | Blg00169.5-exon-Sc0000026-1570713199:659394..659556 | Branchiostoma lanceolatum | exon |
| Blg00169.5-exon-Sc0000026-1570713199:658417..658619 | Blg00169.5-exon-Sc0000026-1570713199:658417..658619 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:658417..666587 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00169 |
|
