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Blg00167.3 (mRNA) - B. lanceolatum

Overview
NameBlg00167.3
Unique NameBlg00167.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:741436..750020-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00167.3 ID=Blg00167.3|Name=Blg00167.3|organism=Branchiostoma lanceolatum|type=mRNA|length=8585bp|location=Sequence derived from alignment at Sc0000026:741436..750020- (Branchiostoma lanceolatum)
GGCATTTCATGTCGTAATTTCACGTACACGTAGTCGTCTAACTCATGTCT CAAGTTCAGCAAGTGAAAATATAGAACACCTGTTCTTTCGTGACACAAGT TTAGAACCAGACTTCGATGGAACGTCTACAAATTTTCGGACAGATTAGAA AAACCGACAAAAATGTTTGAGAAAACCCTGGTCAAGGATTTAGTGTTTGT GTATCCTACCAAGTATGTCACTGCCAAGATTAGGTAATTTTTGCCCTTCT GAGAATTTTTCAAGCCCCTCAAATGTTGGGAGGTTTGAAGAGATCGGAGT GACCTTGGTGCAGGTGGTGAGATTTGTGCTGTTTGTCCTGATCATGAGGT GTTTCTACCATTTTCTCAGACTCATGATACAGGAAATAAGGCAGCAGAAG GGTAGGTATCAGACTTCTGTGGACTTGTTTGATAAACAGCAGTTTCTTTT GAAAACAGTTGCCCCCCCCCCAAATTAGCCCAAATGTGAGACAGAACCTT TGTTGTATCCCATCTAAAATGTAAGAAATTGGTGGCTTCTTGGTGGAATT GCATATATTACATGTTTTTGCGTACACCAGAAGTAAAGCATTTTAGGTAA AAAATTTTGATGTCAGACTTTGTACATTCTTTGGACCACACAGTTGTAGA GAGTGTGCACAACCATTTTAGTGTTTGTTGACAAAACAATTTATACATTG GGTGAAGCTGACCTCATGTGACTCATGTTGAAAATGAGCACCTGCTGTCC AAGTTTGAATTCTTGTAGAATTTGGTTGGCAAAAACTACAAACATTCAGA ATTTGAAAAATCTACATTCAGATTCACATTTGTAACTTAATTGTAACTTA TTTCCAACATATTCCCGTCGTTTTGTCACATTTCCATCCTTAAGAAACAA CAAAAACGCAAAACGTGTAAAATCTGACTTATTTGCATATTATTTATCAG CCCCCATATTATAATATGCAAATAAGCCAGCGTAGAACGCTAAGAAATAA CCGAATTGCACGACACTACACTACAAAGTCGCATCCATATGTGATGAATA TTGCTTTGCAGTGTAATAAGGTAGATTCAACTAATGATGTAGGAAAATAA CCAAAAACAGTGAATTTTATTTATTATTCGGATTACAATACGTCCCAATA AAACCAAATTCAGTAGTTTAGCATCAGAACAAAATTCAAATCATTACATA TTTTCAGAATCAAAGAGACTAAAAACAGATTTTATTTCAGACAGCCCATA AGCACAGATTTACAGTAAAAATGAAGGCTTTTGAAAGCGATCTCAAGTCC TAAAAAAATTGACGTATGATTGAAATACAAATAGTTTCAGTTGCCAGTCA AACAACCAATGACAATTTGTCATCATATGTTACACTGAGTTAATGTTTAA TGAGTTCCTGTCAGAAGTTGGGATGATTTCCTTTGTGGCAGACATGTTCT GTGTACAGGTGTGACATGTTACCTGTAGATCACCTGTCAAACAGGTGTGC TGACTAAACAGAACCAAAGGATTGATAAATAACATTTCAGTTTGATTGTA CTGAATAATGCAGATCTGGGTACTGGTCTTGACCCCATCTTGGAGTGTTA AACATTGTGATGGTCTTCTGCAGTACATTGGTCTTTTTAAAGGCAACCAA AGCAATATTAGGGACCAAAAAATGAAAATTAAAGAAATGCTGCAATCTTT ATTGTATTGACATTTGATAACAAGTTGTCTAGCACATTTGTGTAATAACT TCATACTTTGAGCATTCTAAAACAGTGCAAAATCTTGCCATACAATGATG CCCTTAGTTTCGCGAGCCTACAAAAACCCCGGCAACGATTTTCAGTGAGA TCTCACATTATAGTACAAGTCATATTTTTGCATCATGGATGTTGCTATTG TGATTGTGATAGTGTTGTTTGAACTTATCATGTATAGAAATGACTACTAG TAAATAAAATTGACTTTCTAAATCTGATTTTCGTGCCCTAATATTGCTCC TGGGTTGCCTTTCAGTACCTTCATTCCACCTTTTATCAACATTCAGCCTG CTATGGTAGCCATTTTGGCAAGGTTAAATATTTAATGTTCATATCATTTA GTCTTGAATACCTGTACATGTAATACATGACTCGTAGTTGTACATACACA TTCTTCCCTTCTAGCACGTGTACACGTGCTAGAAGGGAAGAATGTGTGTT ATTGTTAAGTCACAGACAGATTTCATATCTAACCTGTAATTCCTGTGTCC ACTGCTAGGGGTCACCAATGCCGCCACCAAGGCCCCTCGCTCCAAGTCGT CCAACTCCAATCCCAGCAGACCGCAGACCAGACAGCTGAGGTCGTCAGCG ACCCCGCCGGGGTCAGCGGGGAAGAAAGATGGCGGGTCCGCGAAGGGAAG GAAAGGCGCCGCCCTGCCGTCCAAGAGCAAGCCTGAGACGTCTTTGGCCG CCTCATTCCAAAAGTTGTCTGTCAAGGAGACAAAAACTAGTGTCCCTGGG CAGCAAAAGTCTGCAAGGTGGGCACACTGTTGTAACTTTGGTAACTCTCT TTAGTATCATTCAACTATATAGAGCTTTTCATTTGCATCATAATAATTAC ATGTATGTTGAATCCCCAGGCAGTAATTGGATAACAGCAGCAGCATGTTG TGTTTAACAAACATACATTGTGATCCAATTTGGCGCAAATAACGTCAAAT GAAAAGCCTGTATTTGGCATCTGGGATGCAATTTTTATTTTGCCATTAGA CATTTTTCAGTTTATGTCATCCCTAGACTTATCATTGACCCACATACATG TATATATACATCAGCTTATATGTAACCAATATCTACATATGTTGAGCCAC TGATGCCCCTTTTTCCCCATACAGGGCCATATCAACATCATCAAGGAAGA GTAGCGGTACTTCCTTCTCCACCAGTAGTCGTGGCGGGAAGACCTTTGCG GGTATTGATGACGTAGCGAGGTATATCCTGGCGAATAAGTGTAAGAACGT GGTGGTGATGGCGGGGGCTGGGATCAGCACACCCAGTGGGATCCCTGACT TCAGGTGAGACTAAGAATACCTTCATCTTCTGGTTTATACTAAAAGGTAA TCTGAAAGGTTTAGATCTACAGCGCTGTAAAGCTTTCTTATTGGGTTGAG ATATGAAAGTCATTTCTTGCATAATTACAAAGATAGTGCTGCTTTAGTAA GCATTACCTTCTTTATGTGTCAGGTAGCTTCAAGATCGTTTTGTATTTCA GCATGCATTGAAATATGCTGCCATTGGAAATTCAGTTGAAACTGACATTT TCCCTGGATTGTGCTTAATGTTGTGCACTTTTCCTATATCTAATGATACG TCATTCTACTAATAGGTTACCGAAATTGACATGGGCAGTATACATTTAAC TGGATGTTACAACATTCAATGACAATACTATTTGCACTTTTTTCTCTCTC TTTGCCATGGATACAAATATGATATGATAAATCTGAAACTTGGGGTGTCC CTGTGGTGTAGTGGTCTGCGCCTCTGGTACTTGCCACATCTGGTTCAAAT TACTTGGACCAGAAGGCCCGGGTTCAAGCCCCGGGTAGGACACTTCTGGA CAAGAGGCACATTGAGTCATACCAAAGACTTTATAAAAATGGTACATACA TGTACTTGTGAAACAGTATGGAAATTAAACACACTCCACTGCCAGTGGAC TAGCCCCCTGCTGCAGTGATTGCACCACAGTGTGGCCAAGGGCTATGAAA CGGAGATGGGCTCTGCCCTATATACCTTATGGTGTGGGAGGATTTTAACT AACTAACTAAATCTGAAACTTACAGTAAATGTATGCCATTAAAGATATGA CTTACAGTAAATGTATGCCATCAAAGATATGAGCAAAGCAGCTGTTTAAC CATACTTCTACACTCCCCAGGTCCCCTGGTACTGGTCTCTATGACAACCT ACAGCAATACAACATCCCCTACCCCGAGGCCATATTCGACATCGACTACT TCCACATGGACTCCCGTCCCTTCTACACCCTGGCCAAGGAGCTGTACCCG GGGACCTACAGGCCCAACTACGTGCACTACTTCATCCGCCTGTTACACGA GAAGGGACTGCTGCTGAGGATGTATACACAGAACATAGACGGGCTGGAGA GGAGTAAGTCAGGTTTTATCCATGGTGGATCTCTCCTTATTCCTAATGAT AATGGTTTATTGAATATAATAATAAGTATAAGTTAATTAAAGGCACCCAG AGCGTTTTATGAGGCTTGAAAACTGGAAATATTCTAGTTGCTGTAATCTT TATGAAATTGACATTTAATGCCACTGTTTACCGCATTTGCATGCGGATTT CTTATCAAAAGTGCTAAAAAGCGGCACAAAAATAAGCTACATGGTGATGT TTTAGTTTCACACACCTAGTGTAAATAGGCCGATACCATAGCCCCGCCCA CCTCCGTCAAAACGTAGAAATGCAAAATTAAAACATAAAAATGCAAATAT TTGACAGACATTCTCTGTCATTGGTCAAACCGCTAAATGTGATGGACAGT CAAGATCAGTCTATTAGGGCTTGGATTTTCTATCTGTTCTCATCACACAA CGACATCGTATCTTTGCTCCTTTAATGTCGATATGTAATGGTATAGTGTT ATTGAAACTTACTATGTGTAGGAATGACTAGACATTTGGGTTTTTCTAAT TCAAGTTTCAAGCCTCATAAAATGCTCTGGATGCCTTTAAAGCCCATCGT GTCCAATAGTGGCAGTCAACAGACTGAATCGGTGCTTGGACATTACTTTT GATTAAAACGTCTGGTATAACAAAGAAATTCTAGTCATTAAAGTAGCATA TAGCGTATTCTCCTGTAAACTTTGTGGTTTTGCCACCTTTTGGGGTCATG GCAGGATGATCAAAATAGTCATGAATAGATTTTTTGGGGCAGACCTTAGG CGTTGGAAAAAGCTTTTTATTGATTGAAAAGATTTTGACACAGATACAGA TACAAGAATTATGGATACTTTTTAAGATAAAGAGGATTGTAACTTACTTT CAAAGGAGAGGTTAGTAATAGTAGTATCCTGTATTTGATTACAAGCATGT AAATGTTATTGATGACAGTAGCTACCTTAGGCTTGTTCTCTCTGAGTGCT TTTCCCAGTTTGAAATGTTCAGGAAACACCGTATAAAAAAAGCCGCTTAC AACGATTCATGTTTTGTGTGTTGCAGTGTCAGGAATCCCGGAGTCCAAAC TTGTGGAGGCCCACGGCACGTTCGCCACAGCCTCCTGTGTCAGGTGCAAT GCTAGATATTCAGGGAAACACATCAAGGTAGGAACACAACAAACAAACAA GCAAACAATGCCTTGTAATACATTAGTTGTATTTCTATTGTCGGATGGTT TACTACTAGACTTGTCTTACATTAGTTTGAATTGAAATCATGCTTGTGAT TGTAACTTGCATTATTACTATTAGCCTTACAACTTCCTGTTTGAACAAGC AGGTTATATGTTTTGAATTAGCAAAGTATAAGTTGAAAGTTGAAATCCTC CCACACTATAAGGTGTATAGGGCGGTGCCCATATCCGTTTCATAGCCCTG GGCCACACTATGGTGCAATCACTGCAGCAGGGGGCTAGTCCACTGGCAGT GGAGTGTGTTTACTGTTTCAGAAGTATGTACCATTTTTATAAAGTCTAAA GTCTTTTGTATGACTCAATGCGCCTCTTGTCCAGAGGTGTCCTACCCGGG GCTTGAACCCGGGCATATGCCTTCTGGTCCAAGTAATTTGAACCAGATGT GGCTAGTAACAGAAGCGCAGACCCCTACACCACAGGGACACCCCAGCAAA GTATAAAGCACTCTTTAAGTAAGTTTGTCTGTTGTGATCTATTGCTATTG TACAATTAAGATACAGAAATCATTTTTGTTTATCTTGCAGGCTGCCATAA TGAAGGGGGAAACGCCAAAGTGTACAAATAGTAAATGGTGCAAGGTAAGG CGCTTTATCTATTATTCTTCCAAAATGGTCAAATTCATAAAGTGTGTGTA GTTTGCTCCATCATATTTCTCGGGGACATACTTCGAAAATTTGATAAATG ATATTTACTTCAAAAGCTACAAATTATACATACATATTTAATCATTTTCA AGAAAACATTTTTCACCAGTTACTGTAAATGCATTTAAGTTCGCTTGGTT TTTCGTGCTAACGTGAGAATGGAGTGTTTGCGGTGGTTTTGAGTTCGCGG CAGCGCTATACTGTTGTCACATACTGCTACAGTATTGGACAAAAATGTTC TCCGTGATTTTAAGTTCGCGGTGAAACGGTTGCCGCAAAAACCGCAAACA TAAAACAACCGCTAACATTTCTGTATTTACAGTATATGGTCTTACGGCCG TGCTAATTTGCCCTCCGAATGACAGCATTGTAAATGACGTTCATAATTGT CTGTCCTGTGTTCTCCAGGGTAAGATAAAACCAGACATAGTATTTTTTGG AGAAGACCTACCGAGAAGATTTTACTACTACCTGAAGGACTTCCCGCTGT GTGATCTGGTGCTGGTCATGGGGACATCACTAGAGGTGGGTTTGGTTACT GTTTGACAATTTAAGCATAGAGCTGTGTACCGGTACACTGTACCGATACA GTACCAGGTACAATCAATTAGGTACAGGTCCAAAATACCTGAACCCTGGT GGACCGGTACTGGACCGGTACTAATCAGGTCAAGCCTGGCTCAGGGGATG GCCACTTCGACAGATAAGATTACTATGAAATTACCGTGGCAGTGCACTAA AGCCACATCTATACTATACTCCAGCACATAAAACACATTTGCAAGGCTGG AGTCAAATTTTTATGTGTTTTCATAAAAGTACCTAGCACAATTAAACATT ATGTTGTTACCAGTTCAAACATGCTTTTGTCCTTATTGAAAAACTACCAT TTTCTGAACAAATACTTTAGGTTCAGGTACCTAAACCCGTGTACCTGTAC CTGTACCTAAAATTTGTTTAGGTACACAGCTCTATTTAAGCGTGAACAAG TCTTGGAGGGGGAACTGTTGTGAAACATGTTAAGGAATTGTTGTAACAAT TTCTTAAAACATCATGTTTCAAAACACTGCAAGAGTAAAAAAGGAACGTA TATTGAAGAGATATTTGTTTCAAATTACCAAAAAATTACCCAAAAAACTC AATTTTTTTGCATTTATCATCCATATTATGGTCAGTTCTCTTCTCCCCAA TTAAACTTGCATGCTTTGATAAGTTTGATGACCTCACACATTCACATCTT TCTTGAGGTCCTTGTAAAAGTTGCTGAAATGAGAGACTATGTCATAATTG TCACAAACTTACATCTGTAAACACTTTCCATATAGCATCTGTCTTCTCTG TTATGACCAGTGGAAGATTATCTCTTCAGTACGATAAACTCCTTCGAGAA TATTTTCACAAAACTGTAAAAAGAATTAGTTCCTATGTCATATCTTTCTG CTGAATTGAAGTCAATCCGTTATTTTTCTCCCACCGAATCTTATGTTCCA TCCCCCCCCACCAGGTAGAGCCATTTGCCAGTATCGTGAACTCCAGCAGA GGTTACGTTCCCAGGGTGCTATTCAACAGGGACCCCGTGGGTCCGTTTGG TCGCGTGCCGTTACGCGACACGGACTGCGCGGAGCTGGGGGACCTGGTGC AGGGCATCCAGAGGTTCACACGCATCCTCGGCTGGAAACAGGCCATGGAG GACCTCATAGAGAAGGCTGAGAAAGAACTGGTACGTTCTTGCTTTCTTGT TTGTGTATGAAAGTTTTATGTATAAATAGTCCTGTTCCAGGCATTTTGTT TGTTTGTTTATTCGTTTGGCATGCACAAACATTGTATTTACATGCCAGGG TTGCCCAACTAGCTTAAACTATTATAAAGGATGCCTAAGGCATGCAGATG TAACAGGATGAATCTGTATTTGGATGAAATGTTAAAATATTTGAGCTTAT CTTTGTGATGGAGGAGTAGAAGTAGAAACTTGGATGTGTGTACTAAGCTT GTTGGTGGACTAAGATCCAGGGTCTTTTTAACTATGTACAGCCTTCCCAG GTTGATTTCTCAATTATTCTGATGTGTAGTCTCTTTAATTTTGCATCCCT GTGAATGTGATGAGCTTTGTTTTCCTTAATTTCCATCTACGTCCTCCTAA TTGACTTTTGTTTTCCTGTTCTTTCCCTTCTCTCTCTTGTAGACTCACAG ACATGTACAACAGGCAAAAACTCAGTGAATTTGTTTTATTTCAACAGGAC GAGAAGCTGAAAACCGACACTTTGTTCAATGGCGTCGTGGAGTCCGACTC AGACTCTTCTTCGGGGAGCCGCTCTCCCGCCAACGGGGTGCCGCCGCGAC GTCAGTTCCACACCTTCACGCGCCGCCCGATCATCACGCGGGGGAGACAG AACGGGCACATCTCCTCGAGCAGCTCCTCTAGCAGCAACCGGACGAACTA CAGGTCGAAGAAGGAGGAGAGCAGCGAAGAGTCTAGCGAAGAGTCGGACA GTAGCGAAGGAGAGTCTTCCGACAGCTCAAACTGA

Coding sequence (CDS) from alignment at Sc0000026:741436..750020-

>Blg00167.3 ID=Blg00167.3|Name=Blg00167.3|organism=Branchiostoma lanceolatum|type=CDS|length=1551bp|location=Sequence derived from alignment at Sc0000026:741436..750020- (Branchiostoma lanceolatum)
ATGTTTGAGAAAACCCTGGTCAAGGATTTAGTGTTTGTGTATCCTACCAA
GTATGTCACTGCCAAGATTAGACTCATGATACAGGAAATAAGGCAGCAGA
AGGGGGTCACCAATGCCGCCACCAAGGCCCCTCGCTCCAAGTCGTCCAAC
TCCAATCCCAGCAGACCGCAGACCAGACAGCTGAGGTCGTCAGCGACCCC
GCCGGGGTCAGCGGGGAAGAAAGATGGCGGGTCCGCGAAGGGAAGGAAAG
GCGCCGCCCTGCCGTCCAAGAGCAAGCCTGAGACGTCTTTGGCCGCCTCA
TTCCAAAAGTTGTCTGTCAAGGAGACAAAAACTAGTGTCCCTGGGCAGCA
AAAGTCTGCAAGGGCCATATCAACATCATCAAGGAAGAGTAGCGGTACTT
CCTTCTCCACCAGTAGTCGTGGCGGGAAGACCTTTGCGGGTATTGATGAC
GTAGCGAGGTATATCCTGGCGAATAAGTGTAAGAACGTGGTGGTGATGGC
GGGGGCTGGGATCAGCACACCCAGTGGGATCCCTGACTTCAGGTCCCCTG
GTACTGGTCTCTATGACAACCTACAGCAATACAACATCCCCTACCCCGAG
GCCATATTCGACATCGACTACTTCCACATGGACTCCCGTCCCTTCTACAC
CCTGGCCAAGGAGCTGTACCCGGGGACCTACAGGCCCAACTACGTGCACT
ACTTCATCCGCCTGTTACACGAGAAGGGACTGCTGCTGAGGATGTATACA
CAGAACATAGACGGGCTGGAGAGGATGTCAGGAATCCCGGAGTCCAAACT
TGTGGAGGCCCACGGCACGTTCGCCACAGCCTCCTGTGTCAGGTGCAATG
CTAGATATTCAGGGAAACACATCAAGGCTGCCATAATGAAGGGGGAAACG
CCAAAGTGTACAAATAGTAAATGGTGCAAGGGTAAGATAAAACCAGACAT
AGTATTTTTTGGAGAAGACCTACCGAGAAGATTTTACTACTACCTGAAGG
ACTTCCCGCTGTGTGATCTGGTGCTGGTCATGGGGACATCACTAGAGGTA
GAGCCATTTGCCAGTATCGTGAACTCCAGCAGAGGTTACGTTCCCAGGGT
GCTATTCAACAGGGACCCCGTGGGTCCGTTTGGTCGCGTGCCGTTACGCG
ACACGGACTGCGCGGAGCTGGGGGACCTGGTGCAGGGCATCCAGAGGTTC
ACACGCATCCTCGGCTGGAAACAGGCCATGGAGGACCTCATAGAGAAGGC
TGAGAAAGAACTGGACGAGAAGCTGAAAACCGACACTTTGTTCAATGGCG
TCGTGGAGTCCGACTCAGACTCTTCTTCGGGGAGCCGCTCTCCCGCCAAC
GGGGTGCCGCCGCGACGTCAGTTCCACACCTTCACGCGCCGCCCGATCAT
CACGCGGGGGAGACAGAACGGGCACATCTCCTCGAGCAGCTCCTCTAGCA
GCAACCGGACGAACTACAGGTCGAAGAAGGAGGAGAGCAGCGAAGAGTCT
AGCGAAGAGTCGGACAGTAGCGAAGGAGAGTCTTCCGACAGCTCAAACTG
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00167.3Blg00167.3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00167.3-exon-Sc0000026-1570713199:749788..750020Blg00167.3-exon-Sc0000026-1570713199:749788..750020Branchiostoma lanceolatumexon
Blg00167.3-exon-Sc0000026-1570713199:749620..749651Blg00167.3-exon-Sc0000026-1570713199:749620..749651Branchiostoma lanceolatumexon
Blg00167.3-exon-Sc0000026-1570713199:747504..747762Blg00167.3-exon-Sc0000026-1570713199:747504..747762Branchiostoma lanceolatumexon
Blg00167.3-exon-Sc0000026-1570713199:746967..747146Blg00167.3-exon-Sc0000026-1570713199:746967..747146Branchiostoma lanceolatumexon
Blg00167.3-exon-Sc0000026-1570713199:745868..746100Blg00167.3-exon-Sc0000026-1570713199:745868..746100Branchiostoma lanceolatumexon
Blg00167.3-exon-Sc0000026-1570713199:744694..744794Blg00167.3-exon-Sc0000026-1570713199:744694..744794Branchiostoma lanceolatumexon
Blg00167.3-exon-Sc0000026-1570713199:744027..744080Blg00167.3-exon-Sc0000026-1570713199:744027..744080Branchiostoma lanceolatumexon
Blg00167.3-exon-Sc0000026-1570713199:743436..743552Blg00167.3-exon-Sc0000026-1570713199:743436..743552Branchiostoma lanceolatumexon
Blg00167.3-exon-Sc0000026-1570713199:742241..742456Blg00167.3-exon-Sc0000026-1570713199:742241..742456Branchiostoma lanceolatumexon
Blg00167.3-exon-Sc0000026-1570713199:741436..741723Blg00167.3-exon-Sc0000026-1570713199:741436..741723Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:741436..750020 -
Properties
Property NameValue
GeneIDBlg00167