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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:2415212..2420911+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00166.0 ID=Blg00166.0|Name=Blg00166.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5700bp|location=Sequence derived from alignment at Sc0000026:2415212..2420911+ (Branchiostoma lanceolatum)
ATGACCATTATCGAACGGACATTTGCAAAAAAACTACAGGTGTTTCTGCC
GAACGATCCGCCTTACACGTGGTTGATGGCAAAGATGTGGTTCAACTGTG
CCGACGGGAACTACCACGAGGCTGTGCCCCATCTCGGTGAGATGAATTTC
ACACATTTTCCATTCCGTTCCAATTCGTTCCGTTTCGTACTTTAGGGACA
CCCGTTTTGACGTGACGTCACACTCGCCTTTCTGGTTGGTTGGACCCGAA
AGATTGCTTTCCATGAATAGAACTATGCATAGATTGATGCATGCATTTTA
GATGTCATAGCTACATGATTGCAATCATATCTACGAATTCAAATCTACCT
CTACAACTATGTTTAACTGATCAGGATGGCGGACAGTATATCAGTGAAGT
CATAGTGACGTTTGTGCGAAAACCTGTAGGATTCTGGGTACAATGAATGA
ATAAACGACTTGAGCGATTAAAGGTTTATTATTGCGCTTATGACCAAAAT
CAAAATGATACAAACATCATATGAATGATATGTATAAAATGAAACTGACG
TAAAAAGATAATCTTTTAGTTCTTTCTTTCTTAAATTTACTATTTACGTT
TTATACTTTACTATTGTATACTAGAATATGATGCATTTTGTCATGTGTAC
ATGTGTTTATTCATAAATATACCTTTTTTCTCTTCACAGGATTCACCCAT
TTATTGGTTGAGGCACTCGCACTTTCAGCCAATCAGAACCTCGCGCCGGC
CCACCCGATTCTCCGTCTGATGCAGCCGCACTTCATCTACCTTTTCGCCA
TCAATCAGTGAGATACTGAAATATGAATATATTGATGTTCGCGGTGGTTT
TATTTGATATGCTGTTTTCATAAATCAAAACACCGCGAATATGCGTCTCC
ATTGTATTATTATCATCATTACCGCCATATCAAATCCCCGCGAAGATTAC
CTTATTCACAGTATATGGCAGAATAAGTCAATTAGATAAAGCACACAAAT
CATGTTTAGATAAACAGAAGCCAGCTTTAACATCGACAATGTGTGATATT
TGTTTGCATTTATCTTAGCTTTTGGGTGGATATGAATGCAAAAAGATTCA
TATATTTATTAAGGTATGCGTACTTAATATACAAGATGCAATATGTTTAG
GCTGCATAAAAGACATTGGTATGTCAATGACGAATTTATACATTGGAGCG
TGTTTTGATTAAAGATTCCATTTACGGCAATCAAAGATACACGTTATTAG
GTTTTGGCGACGCTTCGGGAGCGAGCCTAATGGAATGCATGATATTGTTT
GTTGTTGTGTAGGCTGGCGTTGGAGACACTGATCAGCAAAGATGGTGGTC
TGGATAAAGTCACCCAGATTGGCAGGGACGGCGGCTTCGCTCTTATCAAA
GAAAGGTAAGGTCATGGATCAAGGTAGGAATAGGCTAATGAATTCAAGTC
CTACCCACACCATGCATGGTGCATAGGGCGGACCTAACTCTGTTTATATA
GTCACACAACATTGTACAATTGTTACAGCAGGGGCCTAATTCACTGGTAG
TGGTGTGTGTGGGTTCAACTTCTATGCTCTTTTCCAAACGCTGAGTCGTA
TGCAAAATAAGCCATAAGTGCCATCTTATAAGTCTTTCGTATGATCAGTT
CTTGGGATATCAGTCTTACTGGGTAGCTGCTTTGATAAATGGTTTTTCAT
TTGATATATTTAGCGTCAAATGTCAAAATAATGTTTCTTCTTCTTTCATA
TATGATTTCTACAGGCTGAAGACCTGGCGACTTGATGTGGATGGTACACT
TCCGGAAGACTTGAAAAATCGAGGGGTGAGAGCAGGTTTTTGAGAACTAA
AACTATTCGCAAGTGAAAGCTTCATTTAACTCGTATTATTTATTCCACCT
TCATTTTATTCAATGTGTTTGTATCAACATACTAAGTAAGTCAACACACG
TTGATACCATACTTATTTAATGCTATAATGTATTGGCTAACTTTAGATCA
GATTACCTTTATACAATATATTTTATCATCTACATAGTATCATAATTTAA
TTTTCTTATCCTGTATTTGTATATTGTTTCCTATGTTAACTTAGATGAAT
ATTGTTATTACTGTTGGCGTAATAAGGACGTTCAGGATTCCAGGTACGCA
TGGGCAAGGTCAAAGGTGAAACCCCCTTACTTGTAAACAGTTCTTGTCTC
GACCATGCGTCATCGGTCGATTTGCATAATAATACGGGGCGTGTTTTGTT
GATATCTCAAGGGACCTCACCTTTGGCCTTGCGCATGTGTATTTTGAATC
CTGAATAGGGACTTTCTTTTTAATGTAAGGCTGATATTTTCTCAATGAAT
CATTAATCACCATTATTATCATCATTGATGCTACGTAATAAGCAAAGCCA
TTGAAACGCGAATACAAACCTATTCAGGTGGACGATGAGAAAAATTTGCC
TAAGTACTACTACCGCGACGATGCTCTGCGCTCGTACTACGTAGTGCACA
AATACGTCACCAGCGTCGTCAAGATTTTCTACGATGATGGCAGTAAGTAT
GCAAATATGACTGACGTGTCACCGGTAATTTCCTGGTCATCTATAACATT
ATTACCTTTGTGAAGGAGGGCGTTGTTTTAGGTGTATCTATATGTCTGTG
CTCCCGCATTTCCACATAATAATTTTGTCCGACAAACTCAAGAAGCTATG
AATGTATTGTGATGATATTTCGAATATGGGTAGGTCTTTGGAAGACAAGG
TTGAAGGTCAATTTTGGGCCTTCTAGCGGCTTTTCTTGCTTTACACGTAT
CAACGACTCAATGCAAGGAGACGGGTTGAAGTCTTGCTTCTAGCTGGCTT
GCAAACATCATCTATATCTACAACGTCATGAATTTGCACGAGAGACGTAC
GAGATATTTCAATTTTGGATAATTTCCGTTTTTTTCTCAGACGATTCTGC
CAAGCTGAGGGAAGACAAAGAGATCCAGGCTTGGGCAAAGGCTCTTGCTT
CTTCATCCGATGGAAGTATTGTCGTGAAGGTAATTTAAAATGCATTAAAC
TTCACAAGCTCAATCTTCTGTCAAGAAAGTAATTGACGGATGTTATGATT
ATTTCATCCATATGCCGTTATGATTAATTACATTATATAAATGGAAAGGT
TAAACTGTTCTGCAACTAAAAAAATCGGACTCCTCAAAAATTGGAATTTT
CGACTAAATCACACAGTCGTCTCAGCTATTTGACTCAATCACTGTGGACA
CGTGACTTGCCGTACGTGTGACGTCAGCAATGGGTCAACGTTTGTTGAAA
GTCGATATCTTTCCCCGTCCCGTGTGAAAGAAGGCTAGAGTAGCCTGGTG
TAAATGACCTTCTTTTACTCCTGTCACAAACTGCTCCTGTTCGGTATCCA
TAATGTTGACACACTCCAACGAAACTGTATGACCCGGAGTGTAATATATG
ATATTATGAATCATTATCATCATGGGGGGTGTGAGGTCCCGGGCTAAGGC
GGGCAGGCCTCTAGCCTGGCACGGAACGACTCAACGGTGGGAGCCGTCGA
CGTCACAACCGTGACAGGCAGGGTATTCCACTGAGGAACGGTACGGGGGA
AGCATAAGTGTTTGTATGTGTCGGTTCTGGCGTTGATCGTTTGAAATTTG
AGCTGATGGCTCTCCCAGGTGTGCCCCTGGGATAGTTTTAGTAATCTGTC
AGTGTTAATACTAATATGAATGTTAACTAAGTTTGTAGAAAAAAGGGAGG
CGGGCGTCCCTCCTTCCTTTGAATATGCTGTGCAATCTCTAATGAAGAAG
AACTGTATCATTTGTCCTATGATCTTTTGACCCATTGTTATGGAAATTTT
GTGAGTCCCAGTTCTTATGTCAGAGTAAAGTTTCTTTTCAAAAATTATAT
TCAAATCACACACAGGGAGTTCCTGGCGATGGACAGTTCTCCACCCTTGA
TGAGCTGATCCAGACCGTCACCTCCGTCATCTTCACCAGTAGCGTGCAGC
ACGCAGCTGTCAACTTCATGCAGTGGGACCAGTACGCCTTCGTACCCAAC
ATGCCGCTCATGTTAGAGGGGATCCCACCCAGAAACAAGGTCATTCACTT
GTTACACAGTCTGTTACTGATTATCCGTTCTCCTGTTAGCCCACCCTCCT
TTAGCAGCGCTGAAAACCGCTCGGGAAATGCTCGGCAAACCCTCCCGGTC
TCAGCCCTGCTCTTTTGAACGGAGATTTTGGGTTCTGGGGTATCACCAGC
GAACAGCTTTCAGCCAGTCACAGGAGTGGCACAAGCTCATCTTGTGCAAA
AACCGCATAGGTCGCTGGGAAGCTATCAGCCAATCAAGTTACGTCTTACA
TCACTATTTTGGGTTCAGAACAAGATAACGGCTGTTTGTTCCATATAAGG
CCAGATCATTGATTATTCATGAGCAACTGTCAGTGACGCCTCCAGAACCC
AAAATCTCCGTTCAAAAGAGCAGGGCTGAGAGCGGGAGGGTTTGCCGAGC
GTTTCCCGTGCGGGTTTCAGTGCTAAAGGACGGTGCTGTTAGCCAGGAGA
CTGATTTAGAACATGAAAAGTGCCAATAGGATTCTCTGTCACTATGAAAA
CCTATCGACTTGGAGTCGACTTAAAAAACGCATGTGTAAACCCAGTCATT
CTCTCTGTTCATTTGCACCATAATGGTACAAAATTATTTGGTGGAGGTAT
AAGGTAGTGGAATTCTAGTTTGTTTTGTGTGTTGTCGGTCGTATTATGAG
GAGCCACAACTCATTCTTATGCGAACACGCATTGAAACAGTGCATCTTAA
TCTACATGAGTAAATTTTTTGAATGCGTCTTTTCACAGAATGTTCTAACA
GAACAGGACGTCCTTGATGCCCTTCCTGATAAGAGGAAAACTGTTGAGAT
CAACCTTTTGGCCGACGTCCTCAGTGATCGGGCAACACAGCCTCTGGGAG
ACTTCTTAGTTTCATACCTACAAGGTCCCAAAGAGCTGCAAGCCGTTGAA
AGGTACCCAATGTCTCTCCTGGTTTAGGTAAAATAGAGATATAGTTTTGT
CCATTTGTACGTAATGCTGTGTGTGTGTGTCTGAGTGTGTGTGTCTGAGT
GTGTGTCTATGTATATGTGTGTGAGTCTGTGCGTGTGTGAATGTGTGTGT
GTGCGTATGTGAATGTGTGCGTCTATGTATATGTGTGTGTGTGTGGCTGA
GTGTGTCTGTGTGTGTGGGAGGGGTGGGGGTATGTGACCCAAGTCATTGT
CGACAAAACAAAATGTAAAGCAAGCAAATCAAATAATACAAATGAAAGAT
TAGAAACCATGAAATGGCAAGTCACTGTAATTGATAACTGTCGCTGACAG
AAAAGCTGATCCTGTTATCATCTGACGGTTTTCCAATATTTCATCGAGTT
AACTAACATCATATTCAGTTACCTAACTGCGTAAACTACTGGCTTGATAA
AAAAAAACTTTAAGTTTAATTTGACGTACTTTATAATCATCATATCTTAA
TCTCAAAACTATTGAATAGACCTTTAACAAAATAGATTTAATTAATAATA
ATGTGTTTTTAATGTTTTACAGGTTCAAGGAGGATCTAGCTGCTGTCGGA
AGCAAAATTGAATATGAGAACCAAACGCAGCGTTTCCAACCTTACGACTA
CTTGGATCCAAAGCTCATCCCAAATGCTATCAGCATCTAGAAAATATGGC
Coding sequence (CDS) from alignment at Sc0000026:2415212..2420911+ >Blg00166.0 ID=Blg00166.0|Name=Blg00166.0|organism=Branchiostoma lanceolatum|type=CDS|length=1068bp|location=Sequence derived from alignment at Sc0000026:2415212..2420911+ (Branchiostoma lanceolatum)
ATGACCATTATCGAACGGACATTTGCAAAAAAACTACAGGTGTTTCTGCC
GAACGATCCGCCTTACACGTGGTTGATGGCAAAGATGTGGTTCAACTGTG
CCGACGGGAACTACCACGAGGCTGTGCCCCATCTCGGATTCACCCATTTA
TTGGTTGAGGCACTCGCACTTTCAGCCAATCAGAACCTCGCGCCGGCCCA
CCCGATTCTCCGTCTGATGCAGCCGCACTTCATCTACCTTTTCGCCATCA
ATCAGCTGGCGTTGGAGACACTGATCAGCAAAGATGGTGGTCTGGATAAA
GTCACCCAGATTGGCAGGGACGGCGGCTTCGCTCTTATCAAAGAAAGGCT
GAAGACCTGGCGACTTGATGTGGATGGTACACTTCCGGAAGACTTGAAAA
ATCGAGGGGTGGACGATGAGAAAAATTTGCCTAAGTACTACTACCGCGAC
GATGCTCTGCGCTCGTACTACGTAGTGCACAAATACGTCACCAGCGTCGT
CAAGATTTTCTACGATGATGGCAACGATTCTGCCAAGCTGAGGGAAGACA
AAGAGATCCAGGCTTGGGCAAAGGCTCTTGCTTCTTCATCCGATGGAAGT
ATTGTCGTGAAGGGAGTTCCTGGCGATGGACAGTTCTCCACCCTTGATGA
GCTGATCCAGACCGTCACCTCCGTCATCTTCACCAGTAGCGTGCAGCACG
CAGCTGTCAACTTCATGCAGTGGGACCAGTACGCCTTCGTACCCAACATG
CCGCTCATGTTAGAGGGGATCCCACCCAGAAACAAGAATGTTCTAACAGA
ACAGGACGTCCTTGATGCCCTTCCTGATAAGAGGAAAACTGTTGAGATCA
ACCTTTTGGCCGACGTCCTCAGTGATCGGGCAACACAGCCTCTGGGAGAC
TTCTTAGTTTCATACCTACAAGGTCCCAAAGAGCTGCAAGCCGTTGAAAG
GTTCAAGGAGGATCTAGCTGCTGTCGGAAGCAAAATTGAATATGAGAACC
AAACGCAGCGTTTCCAACCTTACGACTACTTGGATCCAAAGCTCATCCCA
AATGCTATCAGCATCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00166.0-exon-Sc0000026-1570713199:2415212..2415347 | Blg00166.0-exon-Sc0000026-1570713199:2415212..2415347 | Branchiostoma lanceolatum | exon |
| Blg00166.0-exon-Sc0000026-1570713199:2415901..2416018 | Blg00166.0-exon-Sc0000026-1570713199:2415901..2416018 | Branchiostoma lanceolatum | exon |
| Blg00166.0-exon-Sc0000026-1570713199:2416524..2416616 | Blg00166.0-exon-Sc0000026-1570713199:2416524..2416616 | Branchiostoma lanceolatum | exon |
| Blg00166.0-exon-Sc0000026-1570713199:2416976..2417036 | Blg00166.0-exon-Sc0000026-1570713199:2416976..2417036 | Branchiostoma lanceolatum | exon |
| Blg00166.0-exon-Sc0000026-1570713199:2417639..2417753 | Blg00166.0-exon-Sc0000026-1570713199:2417639..2417753 | Branchiostoma lanceolatum | exon |
| Blg00166.0-exon-Sc0000026-1570713199:2418152..2418240 | Blg00166.0-exon-Sc0000026-1570713199:2418152..2418240 | Branchiostoma lanceolatum | exon |
| Blg00166.0-exon-Sc0000026-1570713199:2419127..2419300 | Blg00166.0-exon-Sc0000026-1570713199:2419127..2419300 | Branchiostoma lanceolatum | exon |
| Blg00166.0-exon-Sc0000026-1570713199:2420050..2420213 | Blg00166.0-exon-Sc0000026-1570713199:2420050..2420213 | Branchiostoma lanceolatum | exon |
| Blg00166.0-exon-Sc0000026-1570713199:2420784..2420911 | Blg00166.0-exon-Sc0000026-1570713199:2420784..2420911 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:2415212..2420911 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00166 |
|
