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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:2436972..2440909+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00165.0 ID=Blg00165.0|Name=Blg00165.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3938bp|location=Sequence derived from alignment at Sc0000026:2436972..2440909+ (Branchiostoma lanceolatum)
ATGTCCCAAAATGGCTCTTGGGCAGATCACATCTACGTGCAGGCCACAGC
TGACTTCCTGAAGCGAACCATTCACATTGTTTCGACAAGTGGAGGTGAAG
ATGGCTGCTTCATCTGTGTGGAGCCAATAGGTGGGGAAAGTGAAGGGACC
CCCCTTTTGTTGGGACACTACGCTGAGCGTCATTACCAAAGCCTGGACAC
AACAGGTATTGTGCTTTAGATTTTTGTCTTTTACTCAATGTAAACTTTAA
AAGAAACACAGTGCTGTGATATGTCATACACTGTAGACGTTCANAGGTAT
TGGGCTTTAGATTTTTGTCTTTTACACAATGTAAACTTTAAAAGAAACAC
AGTGCTGTGATATGTCATACACTGTAGACGTTCATTGTCTTCCCACAATA
GTCTTCCTTGCTTTCTATGAACAATATATATTTTTTATACATTTTGATCA
TGTCATACATCCACGCTACATTTCAGCTGCTTTAGGCTCCAGTCCTTCAC
CACTCCAAGGCTCCAGTCCACCGCCACTCCAAGGCTCCAGTCCTCCACCA
CTCCAAGGCTCCAGTCCTTCACCACTCCAAGGCTCCAGTCCTCCACCACT
CCAAGGCTCCAGTCCTCCACCACTCCAAGGCTCCAGTCCTTCACCACTCC
ATGATTATGAGGTGCGAATTAATTTGATTTTTATTGGATACTCATGACCT
CAAAGAAAAGTCAAACTACATTTTATTATGTGATATGTACTTGTCAGCAT
AGTAGTTGTGACAACTGTCCATAATTCCCATAGTTGGTCTCTGTTAAGAG
CAATATGCAGCCAGCTGATGGCACCCCCTCCGAAATACTGCAGAATCATT
GGTACAAGTGTAAGAATAAGATGTATATGTAACCAATGCATTCCATTATG
AGCAGTACACAACAGTGCGAATCACACACATATGGTGGTAAACATGGCCA
GCCCTAAAGCTTTATTGTCTTATGCAATGACATGTACAGTAGTAGTGAGT
CATTTTTCTGTATTTACCAGGTATCTATTGCGATGAGATATCACAGCTTG
CTGGGACCTGAGTCTATTGGGGATACACCACCTGTGGTAAGTAGTTAAAA
TGGCCTCCCACACTGATATACAAACAGTGCCAGATGCAAAAAGAAATGCT
CAGTATAGGTATTAGTCTAAAGCTGCATGTAACTTTGGACCAAATTGATT
GCAGAAGTAAGGAGAGAAACATTCTTTTTAATTTGTTCCTTCTTTTGTTT
TTGACACAAAATTTACAGAGGCGCAGACAGTCAGAGAATGGTGATATGCA
GGTATTCTTCATTAAGTCATCTTTTTCATACCCGAAATGCTCTACATGCT
ATCGCTATCGATAAATTGCATACTTAATTGCACTTTCTTTTCTCTCTTTG
CTAATAGGGTTTTATCTGCATATAACTTGAAGCCATATGATTGCAATTAC
TTANAGCTACATGTAACTTTGGACCAAATTGATTGCAGAAGTAAGGAGAG
AAACATTCTTTTTAATTTGTTCCTTCTTTTGTTTTTGACACAAAATTTAC
AGAGGCGCAGACAGTCAGAGAATGGTGATATGCAGGTATTCTTCATTAAG
TCATCTTTTTCATACCCGAAATGCTCTACATGCTATCGCTATCGATAAAT
TGCATACTTAATTGCACTTTCTTTTCTCTCTTTGCTAATAGGGTTTTATC
TGCATATAACTTGAAGCCATATGATTGCAATTACTTAAATTACTGCTCTC
TCTTACCTGAAGTTTTCTTCTCAGCTTACAGATGCACCCAGTGACCTTGT
AGAGGTGCAAGATCCTAGAGATAGCCTTCAGTCTTGGCTTCAAGCTCGTG
ATAATTTTTCTGCTGATCTGTTGTAAGNTTCTTAGCTTACAGATGCACCC
AGTGACCTTGTAGAGGTGCAAGATCCTAGAGATAGCCTTCAGTTTTGGCT
TCAAGCTCGTGATAATTTTTCTGCTGATCTGTTGTAAGGAAACTAAGGCT
GGCCTTTTCTATAATAACACGATACTAACATTTTTTGTTTTGTTCATCTT
TTGGCATCTTAACTTGCTGACATCTACAGCTGTCTCTTTTTTTATTGTTT
TATTGTTTACACACTACTAACTGGAAGAACATATAGCACTATGAAACCGC
AAACTGCAAAACAAGACTTTATCTGTGATGCTATATGTATGTAATAATGA
TGTCACACATTTATCTGTTATTACCATGCTACGTATTTGCAATGTATGAA
AGAAATACACTTGCTATATATAGACTTTATCAAGAAAAAGGCACACTTCG
AGGGGATTCATGTAATCTTACTTTAACATTGACAACATTTTGATCCCATG
CCCTCTTTTTTTTATTTTTGTGTTAAGGTTTGGGCCATGCGAGGAGGCTG
AGCTGAAGGGATATTTTACTTCAATCAAGCCATTTCTGCAAAGACTCGCA
GACGGAGAGGTAAGTTTAGATGAAGGTATTGTTTGGTACATCAAACTGTA
AGGTAAACAATTTCAATGTTATTGACAGGGCTTCCTATAGTATAATCCAA
GGACAGATATTTAGTGTGGAAAAATAATTGTTGATGTCCGTTTTGTGTTT
TAGATTCCAGACAACAAGCGGCACTCCACATTCTTTGGGCAAGATGAGGA
AGGCAACTCCACCAGAAGTGAGTCTTTTTTCTCAATCTGTATCTGTATCT
ATATAGCCGGTATAACCGCCATATGAGGCGTAACACACCTGAGCTTTGCA
GGCACGCGATGTGGCAGCAGCTGGTTATATAACACTGAACGGTCTGTTAC
ACATAGTCAATATACTACTAGTAGTAATAATGGTGTGTGCACATTTAGTT
GTTTAGTGCAACCCTTGCATGTTTTTACATTGATGCATATTGGAAACTTC
ATGACACATGTACAGTTAAAATAACACCAGTATAATGACTCATGCTAGTC
TTTCCTGGTGCACAAAGGATCACAAGTGAACAAAAGTTGAAATGGCTGAT
GTGGTCAGAACTCAATGACTTTGTAATTNGGATCACAAGTGAACAAAATT
TGAAATGGCTGATGTGGTCAGAACTCAATGACTTTGTAATTTGTACATAC
AAAACAGCCTAATTATCACCATTGTTCTTCCCTTTAGGGAAACTGTATAT
GATGCATAAATCTGGAGCATTTACTGAGGAACAGGCCACTTTCATCGGGA
AGTGTATTATGAAAGAGGTGAAGATTCCTCTGGAGATGCCACTGGTAAGC
CCTCTTCTTACTTGTTAGCAGTCATCATGACAAACTTTGATATTGGGGTT
GGTGTCCAAATGGGCTGTATCCACTGTATTTTCTCTGCGGCAGCATTATC
TTCTTTTGTGACGCTGGGCANCAGTCATCATGACAAACTTTGATATTGGG
ATTGGTGTCCAAATGGGCTGTATCCACTGTATTTTCTCTGCGGCAGCATT
ATCTTCTTTTGTGACGCTGGGCAACAACATACAACGCCTTTCGATTCATG
GACTTTAGTGAACTCTACCTGCAGTTGCTTGCTTATGTGTTGGCAGTTCC
TTGTAAGGAAGACTGCATTGGAAAATGACTAATCTTTATTCATTGCGAAA
AAATATTGAATACATATGTAGTAATATTCCAATATGTTATAAGCCAACTG
CAATGTTTTAATACATTATATTGATGGTTGTAATTTCTCTCATCCAAGAA
AGACTTGTTGTTGACATGTAACTGTCAGAAGCAATGGAGTTTTGATTGGT
GCAATTGAGAGGCACATTTCAACATTTTAGTACTTAAATTCTTCTTTTGG
CTACAGCTGATGGAGTATCAGATTATGGTCCTCCTACCAGAAGCCCTTGC
TGCTATCTACCAGGTGAGGAAAGGCACGACCACGCTGGAGGAGGCCAGGA
ACTGTGTGTGGAGAGCTGGGTTTCGAGAAGACCTTTAG Coding sequence (CDS) from alignment at Sc0000026:2436972..2440909+ >Blg00165.0 ID=Blg00165.0|Name=Blg00165.0|organism=Branchiostoma lanceolatum|type=CDS|length=684bp|location=Sequence derived from alignment at Sc0000026:2436972..2440909+ (Branchiostoma lanceolatum)
ATGTCCCAAAATGGCTCTTGGGCAGATCACATCTACGTGCAGGCCACAGC
TGACTTCCTGAAGCGAACCATTCACATTGTTTCGACAAGTGGAGGTGAAG
ATGGCTGCTTCATCTGTGTGGAGCCAATAGTCCTTCACCACTCCAAGGCT
CCAGTCCACCGCCACTCCAAGGCTCCAGTCCTCCACCACTCCAAGGCTCC
AGTCCTTCACCACTCCAAGGCTCCAGTCCTCCACCACTCCAAGGCTCCAG
TCCTCCACCACTCCAAGGCTCCAGTCCTTCACCACTCCATGATTATGAGG
TTTGGGCCATGCGAGGAGGCTGAGCTGAAGGGATATTTTACTTCAATCAA
GCCATTTCTGCAAAGACTCGCAGACGGAGAGATTCCAGACAACAAGCGGC
ACTCCACATTCTTTGGGCAAGATGAGGAAGGCAACTCCACCAGAAGGAAA
CTGTATATGATGCATAAATCTGGAGCATTTACTGAGGAACAGGCCACTTT
CATCGGGAAGTGTATTATGAAAGAGGTGAAGATTCCTCTGGAGATGCCAC
TGCTGATGGAGTATCAGATTATGGTCCTCCTACCAGAAGCCCTTGCTGCT
ATCTACCAGGTGAGGAAAGGCACGACCACGCTGGAGGAGGCCAGGAACTG
TGTGTGGAGAGCTGGGTTTCGAGAAGACCTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00165.0-exon-Sc0000026-1570713199:2436972..2437101 | Blg00165.0-exon-Sc0000026-1570713199:2436972..2437101 | Branchiostoma lanceolatum | exon |
| Blg00165.0-exon-Sc0000026-1570713199:2437464..2437632 | Blg00165.0-exon-Sc0000026-1570713199:2437464..2437632 | Branchiostoma lanceolatum | exon |
| Blg00165.0-exon-Sc0000026-1570713199:2439349..2439430 | Blg00165.0-exon-Sc0000026-1570713199:2439349..2439430 | Branchiostoma lanceolatum | exon |
| Blg00165.0-exon-Sc0000026-1570713199:2439575..2439638 | Blg00165.0-exon-Sc0000026-1570713199:2439575..2439638 | Branchiostoma lanceolatum | exon |
| Blg00165.0-exon-Sc0000026-1570713199:2440109..2440215 | Blg00165.0-exon-Sc0000026-1570713199:2440109..2440215 | Branchiostoma lanceolatum | exon |
| Blg00165.0-exon-Sc0000026-1570713199:2440778..2440909 | Blg00165.0-exon-Sc0000026-1570713199:2440778..2440909 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:2436972..2440909 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00165 |
|
