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Blg00164.0 (mRNA) - B. lanceolatum

Overview
NameBlg00164.0
Unique NameBlg00164.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2163839..2170439-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00164.0 ID=Blg00164.0|Name=Blg00164.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6601bp|location=Sequence derived from alignment at Sc0000026:2163839..2170439- (Branchiostoma lanceolatum)
ATGGCTACAGGCGGGGGTAACTTCGTAGACACAGCACAAGACGACGATGA CAGGTTTGTCGGTTACTACATGTATACGAATGTAGTTCTCCTTGTCATAT TGACGTAGCTTTACAACATTTTAACACAAAGGGAAGTTTTAAATTCTGTT TTGTTATACAACATGCATTTCATTTTTTTCATTTCTTGAAATATCCCCGA TGGTTACCTTTGAACCTAAGGCAATTGAAGTAGTTAACGTTTAGTTCAGT GAAGATTTACTCCCAAAATAGAGAATATATTCGAGTGAACATTTAACATT TTTGACATCAAATTTCATTCATATTATGTTAAATAACATCCCGTTTTGTT TTGTTACAGTACATACCAAGATCATCTACATGAGGGCTACAAAGCCCTGC AGGCTGGAGACCTGGACAAGGCAGAATATTGTTTTGCAGCTGCGCTAAAG TCTGTTCACATCAAGGGTAAGTCTTGCATTTTAGTAAGAATTTATTTCCA ATCGTCAAAAATGTGTCTAATTTTTAAGTGTTCATTAGTTTTTGTCTAAA AAAAACAACTTTTCTTTAATGCAGACTTGTAGTCTTTCTTATATATTCAT TAAGACGTTTCAACCAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCCGGATGT TTTTTTGGTCAGCATAAGTTAAGATCCTCTTGGATCCGGATGGAATGTGA TAATGTTAGGTATGTACTATGGGTTCCCGAAGACGAAGATCAATGTCGAT TGTTGAACACTTGGAGCCTTTTGTTGATGCTGCAGGTTCGGTTTATTTTA ATTGCTTCCCCTTGCAGCTTGTTCTGGAGGTGCAGGGACATTTTTTTATA GAATTGATAACCGGCGAAAGGAACGGCGGATTTTCAATTTATTTGGCATT ACGGTAAACAAGAGATGTGCACATCACATGTAGATCTCGGTTGTGCAACA TGAGACTTATTGCATTATTGATAAATATATTCTATACGGTCATGTGCTTC CGGTGTTTTTCACAATAGGACTTGAATACATGTAACATCTGTAGTTTATG GCAGGTGGTACATTAACATATATAAAACATACGAAGGACTGTCATATCTA ATTTTAAAATTGATACGAAAATGCTATTTTTTTTTCGTNAATAACAGATA TAAAACACACGAAGGACTGTCACACCTAATTTTAAAATTGATACGAAAAT GCTGTTTTTTCTTAGTGACAGATGTTTTAAAAATTCATACTTGCACTGCT ATTAACGATGCTACGTTGTGACAACAATACAAAATATGGAAACATGAAAA TACTTTTAACAGACTTAAGTATATCAATATGATTACTTTTGAATATGTTA CCGAAAATGGATGAAAAATAATGATATACAAGATTAGTTAATAACTTCTC ACCTTTGTTACAGGTCAACGCCAGAAAGAGGCAGAACCCCTACACAAGCT GGGCGATGTCTATCTGAAGAGAGGAATCCAGTCAAAGGACGGAGGAGATT TCACCAAGGCTGCAGCACTCTGCAATGCAGCACTGGTAAGGTCAAGGAGA GAAGATATAGAGGAAGCGATCCATGAAATAACTCAAACATTTGTTAAGGG CGTCCTGGAGAGCGACCAGAAGGTAGACATCGATGATATAGAGAAGCATA AGTCGATGTTGAAGGCTGACAGGGACTACGTGGAAAAAGAGATCAAAAAC ATTGAATTAATAGCAGATCCATATAGCCTTGATGGCAATGACCCAAATAT AAAAGGAGTGGAGATGAAAAGGGTGGAGGTTATCAAAGGATTGTTTCAGA CACTTGTTGACCGGCGTAAAACGTTCATAGCTGGCCTTGTAGATGAATGC ATGGGGGTAATGGGTCCTCCTCCCTGTAAGTACGCCATGATAGGCTTAGG GTCACAAGCCACAGGATTAGTGACCCCATACTCTGATCTGGAATTTGCTA TTTTGATAGAGGAGGAAACCGAGCATAATGTTCACTATTTACGCAATCTC ACTCATTATCTACATCTGAAAGTGATCAATCTAGGAGAGACTATTCTCCC GGCCATGGGGATTAAGTCTCTTAATGATTTCTACTCAGACGACCCAGTGG ATAAATGGTTTTATGACTCAGTAACACCGCGCGGTTTTGCGTTCGATGGA GCCATGCCACATGCATGCAAGACTCCACTGGGTAGGGGTAGAAACAACAC AGGAACTGGCGAACTCATCCGCACACCAAGTGACATGATAAACATTCTGA AAGACGACCTCACTTTCCATTTAAAGAAAGGCTACCACCTTGCTAGTATA CTTGGAAATGTGTCTTTTCTCACAGGAGAACAGGACTTGGTCGATGAGTA CAGGTCTTTGTGGACTCAGCAACTCAAAGAAGATAACGGGGCAGTTCAGT TGATAATGGTAGATACTGATCTTAGTGAGAATGCGCCTACTTTTAAAGCA CATCCTCTCACTGCTAGCCTACTGAATGTGAAAAAAGAAATCTATCGGTT TTCGAGCTTTGCCGTTTCCTCTTTGGCGCTACTTCACAACATACAACAGA CTACAATCTGGGAGACTATTCGGAAGCTGGAGAACAGTGGAGTCATTAAT AGAGAGAACGCGCACCACCTGCTGGTGATGGTCAGTATCTCGGCCGAACT GAGGCTACGGACATACATGAACAATCGTGGTCAGGTGGAAAACATGTCAG CCTTATCGTCTAAGTCGGACGATACTGGCATTGGGGAGAAATTACAGAAA GTGTTTTACATCTCAAATACAAAGCAACTTATGAGATACTATTACACAGA AAGACCATTGAAAGACTTTATTTCAAAACATACCAACTCACAGTCTTTCA AAGAGCCACCAATCTTCTTTGACAATTCTTCAAAACTAAGGGCAGAGGTA TTCAAGAGTCTGTGCGATTTCCAGAATTTGAGGATATGTGCAGAGCAAAC ACTACACAATTATGAATCTCAATATGGTGAAAACGCTATTCATTATGATA TTGCCGCCTCACTGAACAACTTGGGTGAAGCCTGGCGGAAGCTTGGGGAA CACAGAATGGCGGACAGCTATCATGAACAGTCACTACAGATGATGCGGAG TATCTATGGTGAGGACAATGCACATCCTGACATCGCCGCCTTACTTAACA ACTTGGGTGTCTGCTGGGGCAGTCTTAAGGATCACAGAAAGGCTGTCAGC TATTATGAACAGTCATTACAGATGATCCGGAGCATCCATGGTGAGGATAC TGCCCATCCTGATATTGCCGACTCACTGAACAACATGGGCAGCGCCTGGG GCAACCTTGGGGATCACAGAAAGGCTGTCAGCTACCATAAACAGTCACTA CAAATAAAGCGGATTATCTATGGTGAGGACACTGCACATCCTGATACTGC CATCTCACTGAACAACCTGGGTTCCGCCTGGAAACGCCTTGGGGATAACA GAAAGGCGGTCAGCTATTATGAAAAGTCACTACAGATGAAGCGAGATATC TATGGTGAGTATACTGAACACCCTGATATTGCCGCCTCACTGAACAACTT GGGTAACACCTGGAGCGACCTTGGGGATCGTAGAAAGGCGGCTAGTTATT TTGAACAGTCGCTACAGATGAACCGGAGTATTTATGGTGATGACACTGCA CATCCTGATATTGCCGACTCACTGAACAACCTTGGTGGAGCCAGGAGAGA CCTAGGTGATGCAAGAAAGGCGGTCAGCTATTTTGAACAGTCACTACAGA TGAAACGGAGCATCTATGGTGAGGACACTGCAAATCCTAATATTGCCGCC TCGCTGAAAAACTTGGGTATCGTCTTGAGTGACCTTGGTGATCACAGAAA GGCGGTCTGCTATTATGAGCAGTCACTTCTGATGGAGCAGAGTATATATG GTAAGGGCACCGCACATCATGATATTGCCACCTCACTGAACAACTTGGGT GGAGCCTGGAGACGCCTTGGGGATCACAGAAAGGCCATCAGCTATTATGA ACAGTCACTACAGATGGAGCGGATAATCTATGGAGAGGACACCGTTCATT CTGATATTGCCACCTCTCTAAACAACTTAGGTAATGCTTGGAGCAACCTT GGGGATTGCAGAAAGGCGGCCAGCTATTATGAACAGTCACTACAGATGAA CCGGGGTATCTATGGCGAGAACAACGCACATCCAGATATTGCCGCCTCGC TTAACAACTTGGGTGCTGCCTGGGATGACATTGGGGATCACGGAAAGGCG GTCAGCTATTATGAACAGTCACTACAGATGGAGAGGAGTATCCACGGTGA GGGCTCTGCACATTCTAGTATTTCTGCCTCACTTAACAACTTGGGTAACG CATGGAGTGACCGTGGGGATTACAGAAAGGCCATCAGCTATTATGAACAG TCTCTAAAGATGGACTTGATTATCTATGGTAATGACACCGCACATCCAGA TATTGCTGCCTCGTTGAACAACTTGGGTGCCGCCTGGGGCAACGTTGGGG ATTACAGAAAGGCGGTCAGCTATTATGAACAGTCACTACAGGTGTACCGG GGTATCTACGGCAAGGACATCGCACATCCTGATATTGCCGGATCGCTGAA CAACTTGAGTGAAGCCTGGAGGGCGCTTGGAGATCACAGAAAGGCGATCA GCTATTCTGAACAATCACTACAGATGAATCGGAGTATTTATGGCAAGGAC ACCGCACACCCTGATATTGCCACTTCACTTAACAACTTGGGTATCTTCTT GAGCGACATTGGAGACTACAGAAAGGCCATTAGCCATTATGCACAGTCAC TAAAAATGAAGCGGCTTATCTATGGCGAGGGCACTGCTCATCCTGCTATT GCCGCCTCACTAAACAATTTAGGTACCGCCTGGAGCAACCTTGGTGACTT CAGAAAGGCGGTCAAATATCATGAACAGTCACTACAGATAAAGCTGGTTA TCTATGGTGAGGATACTGCACATCCTGATATTGCCACCTCACTTTACAAC TTGGGTACCGCCTGGAGTGGTCTTGGTGATCCCGGAAAGGCAGTCAGGTA TTTTGAAAAGTCATTGCGGATGCGGCTGAGTATCTATGGTAAGAACACCG CACATCCAGATATTGCCGCCTCACTGAAAAACGTGGGTAACGCCTGGAGC GACCTTGGTGATCACATAAAGTCCGTCTGTTATCATGAACTGTCACGACA GATGGAGTGCAGTATCTATGGTGATGACAGCTAACATCCTGATATTGCAG CCTCACTTGGTCAGAACTTGGAGGGTGCTAAGGGATTGCAGAGCGGCCGT CAGCTACCATGAACAGTCATTACAGAAGAGGCGGAGTATCTATGTTGAGA ACACTGAACATCTTGATATTGCCGCATCACTGAACAACCACGGTGGTCAA ATTCATGCTCAGAAACTCCCGTGTCCAGCCGAATTCGAACGCTGTTCCAC GATGTTCGAAATGACGTAATCGAATCCAAAGGTGCGTTTGATTCGGGGTC ACCTGAGGTCTTTGGAAGTTCTTACTGTAAATCTGCGCGGCCGGGCCCCT TTCCCCGCTTCAGAAAAAAAAACTACGTTCGTCGCAAATATCACCTGTTT TCTGGAGAGTATATCCATACTGGCACTTTGTTGTGGACATCTAACATGTA ACGAAGCAACTGGCGTCGTTTTCTGTGGCATTGAATATTAGAAGGATTGT TTCCGGCGGTGTTAATTACCCCCTCCCCCTATCCGTGCGGCATGACATGC GTTCAAACATCGTAAAGGTACGGCTCCAAGAAAATCCCCCTTACCTCATT AACGATTCAAATTGACCGTAAAGGTTTTCCAGAGGTTTTTGTTTCTGGGA ATTTTAAAAAATGTCCTTGATTTTGAATTATGGGTGATTCAGTGCGAAAA ATGTCAAAAAATGCCATTTTTTCACAGATTTGTCGATATTCACAATACTT AGAATAAGAAATTAAAAAATCCCAAAAACACAAAGTTTTGTTTTGTTCCT GGTCGACAGAAAATATGAAGATAAGAGATATTCATTGACATTTAAAGCCA GGCCTTTGCGATGTGTGCCTGAAAAAAAGGTCTCCCTCAAACCTGAAAAT ATTCGTGTTTGGGAGCAAAATATAGAAAAATCAGCCATTCAGCGCAAATT GACGACATTCAAAGTTTGCAAAATCGCTAATTTCGTTTTATTTTTACAAA ATTTTCCCGTCCCTACTATTTTGTTTATTTATAAATGATTTGCCGTTAGC CAAAACGTTGCACCGGGTAACCCGATACCTTGTCGAACGCGCGTAGCAAC GGGAAAGAATACCTTAGTGACAGACCACCGTGTCAGGAGGAGATTCCGGA TCCTCTTTCACGGACTCACACGTACGTCAACTCAAACGTCTCCTCACAAC AACATGGTTCAGAGAGGCCAAATCAGGAGGAGATTCCGGATCCTCTTCCA CGGACTCAGACGTACGTCAACTCCAACGTAACCTCACTACGAGGTGGCTC ACAGAGGCCAAATCAGGAGGAGATTCCGGATCCTCTTCCACGGACTCACA C

Coding sequence (CDS) from alignment at Sc0000026:2163839..2170439-

>Blg00164.0 ID=Blg00164.0|Name=Blg00164.0|organism=Branchiostoma lanceolatum|type=CDS|length=3981bp|location=Sequence derived from alignment at Sc0000026:2163839..2170439- (Branchiostoma lanceolatum)
ATGGCTACAGGCGGGGGTAACTTCGTAGACACAGCACAAGACGACGATGA
CAGTACATACCAAGATCATCTACATGAGGGCTACAAAGCCCTGCAGGCTG
GAGACCTGGACAAGGCAGAATATTGTTTTGCAGCTGCGCTAAAGTCTGTT
CACATCAAGGGTCAACGCCAGAAAGAGGCAGAACCCCTACACAAGCTGGG
CGATGTCTATCTGAAGAGAGGAATCCAGTCAAAGGACGGAGGAGATTTCA
CCAAGGCTGCAGCACTCTGCAATGCAGCACTGGTAAGGTCAAGGAGAGAA
GATATAGAGGAAGCGATCCATGAAATAACTCAAACATTTGTTAAGGGCGT
CCTGGAGAGCGACCAGAAGGTAGACATCGATGATATAGAGAAGCATAAGT
CGATGTTGAAGGCTGACAGGGACTACGTGGAAAAAGAGATCAAAAACATT
GAATTAATAGCAGATCCATATAGCCTTGATGGCAATGACCCAAATATAAA
AGGAGTGGAGATGAAAAGGGTGGAGGTTATCAAAGGATTGTTTCAGACAC
TTGTTGACCGGCGTAAAACGTTCATAGCTGGCCTTGTAGATGAATGCATG
GGGGTAATGGGTCCTCCTCCCTGTAAGTACGCCATGATAGGCTTAGGGTC
ACAAGCCACAGGATTAGTGACCCCATACTCTGATCTGGAATTTGCTATTT
TGATAGAGGAGGAAACCGAGCATAATGTTCACTATTTACGCAATCTCACT
CATTATCTACATCTGAAAGTGATCAATCTAGGAGAGACTATTCTCCCGGC
CATGGGGATTAAGTCTCTTAATGATTTCTACTCAGACGACCCAGTGGATA
AATGGTTTTATGACTCAGTAACACCGCGCGGTTTTGCGTTCGATGGAGCC
ATGCCACATGCATGCAAGACTCCACTGGGTAGGGGTAGAAACAACACAGG
AACTGGCGAACTCATCCGCACACCAAGTGACATGATAAACATTCTGAAAG
ACGACCTCACTTTCCATTTAAAGAAAGGCTACCACCTTGCTAGTATACTT
GGAAATGTGTCTTTTCTCACAGGAGAACAGGACTTGGTCGATGAGTACAG
GTCTTTGTGGACTCAGCAACTCAAAGAAGATAACGGGGCAGTTCAGTTGA
TAATGGTAGATACTGATCTTAGTGAGAATGCGCCTACTTTTAAAGCACAT
CCTCTCACTGCTAGCCTACTGAATGTGAAAAAAGAAATCTATCGGTTTTC
GAGCTTTGCCGTTTCCTCTTTGGCGCTACTTCACAACATACAACAGACTA
CAATCTGGGAGACTATTCGGAAGCTGGAGAACAGTGGAGTCATTAATAGA
GAGAACGCGCACCACCTGCTGGTGATGGTCAGTATCTCGGCCGAACTGAG
GCTACGGACATACATGAACAATCGTGGTCAGGTGGAAAACATGTCAGCCT
TATCGTCTAAGTCGGACGATACTGGCATTGGGGAGAAATTACAGAAAGTG
TTTTACATCTCAAATACAAAGCAACTTATGAGATACTATTACACAGAAAG
ACCATTGAAAGACTTTATTTCAAAACATACCAACTCACAGTCTTTCAAAG
AGCCACCAATCTTCTTTGACAATTCTTCAAAACTAAGGGCAGAGGTATTC
AAGAGTCTGTGCGATTTCCAGAATTTGAGGATATGTGCAGAGCAAACACT
ACACAATTATGAATCTCAATATGGTGAAAACGCTATTCATTATGATATTG
CCGCCTCACTGAACAACTTGGGTGAAGCCTGGCGGAAGCTTGGGGAACAC
AGAATGGCGGACAGCTATCATGAACAGTCACTACAGATGATGCGGAGTAT
CTATGGTGAGGACAATGCACATCCTGACATCGCCGCCTTACTTAACAACT
TGGGTGTCTGCTGGGGCAGTCTTAAGGATCACAGAAAGGCTGTCAGCTAT
TATGAACAGTCATTACAGATGATCCGGAGCATCCATGGTGAGGATACTGC
CCATCCTGATATTGCCGACTCACTGAACAACATGGGCAGCGCCTGGGGCA
ACCTTGGGGATCACAGAAAGGCTGTCAGCTACCATAAACAGTCACTACAA
ATAAAGCGGATTATCTATGGTGAGGACACTGCACATCCTGATACTGCCAT
CTCACTGAACAACCTGGGTTCCGCCTGGAAACGCCTTGGGGATAACAGAA
AGGCGGTCAGCTATTATGAAAAGTCACTACAGATGAAGCGAGATATCTAT
GGTGAGTATACTGAACACCCTGATATTGCCGCCTCACTGAACAACTTGGG
TAACACCTGGAGCGACCTTGGGGATCGTAGAAAGGCGGCTAGTTATTTTG
AACAGTCGCTACAGATGAACCGGAGTATTTATGGTGATGACACTGCACAT
CCTGATATTGCCGACTCACTGAACAACCTTGGTGGAGCCAGGAGAGACCT
AGGTGATGCAAGAAAGGCGGTCAGCTATTTTGAACAGTCACTACAGATGA
AACGGAGCATCTATGGTGAGGACACTGCAAATCCTAATATTGCCGCCTCG
CTGAAAAACTTGGGTATCGTCTTGAGTGACCTTGGTGATCACAGAAAGGC
GGTCTGCTATTATGAGCAGTCACTTCTGATGGAGCAGAGTATATATGGTA
AGGGCACCGCACATCATGATATTGCCACCTCACTGAACAACTTGGGTGGA
GCCTGGAGACGCCTTGGGGATCACAGAAAGGCCATCAGCTATTATGAACA
GTCACTACAGATGGAGCGGATAATCTATGGAGAGGACACCGTTCATTCTG
ATATTGCCACCTCTCTAAACAACTTAGGTAATGCTTGGAGCAACCTTGGG
GATTGCAGAAAGGCGGCCAGCTATTATGAACAGTCACTACAGATGAACCG
GGGTATCTATGGCGAGAACAACGCACATCCAGATATTGCCGCCTCGCTTA
ACAACTTGGGTGCTGCCTGGGATGACATTGGGGATCACGGAAAGGCGGTC
AGCTATTATGAACAGTCACTACAGATGGAGAGGAGTATCCACGGTGAGGG
CTCTGCACATTCTAGTATTTCTGCCTCACTTAACAACTTGGGTAACGCAT
GGAGTGACCGTGGGGATTACAGAAAGGCCATCAGCTATTATGAACAGTCT
CTAAAGATGGACTTGATTATCTATGGTAATGACACCGCACATCCAGATAT
TGCTGCCTCGTTGAACAACTTGGGTGCCGCCTGGGGCAACGTTGGGGATT
ACAGAAAGGCGGTCAGCTATTATGAACAGTCACTACAGGTGTACCGGGGT
ATCTACGGCAAGGACATCGCACATCCTGATATTGCCGGATCGCTGAACAA
CTTGAGTGAAGCCTGGAGGGCGCTTGGAGATCACAGAAAGGCGATCAGCT
ATTCTGAACAATCACTACAGATGAATCGGAGTATTTATGGCAAGGACACC
GCACACCCTGATATTGCCACTTCACTTAACAACTTGGGTATCTTCTTGAG
CGACATTGGAGACTACAGAAAGGCCATTAGCCATTATGCACAGTCACTAA
AAATGAAGCGGCTTATCTATGGCGAGGGCACTGCTCATCCTGCTATTGCC
GCCTCACTAAACAATTTAGGTACCGCCTGGAGCAACCTTGGTGACTTCAG
AAAGGCGGTCAAATATCATGAACAGTCACTACAGATAAAGCTGGTTATCT
ATGGTGAGGATACTGCACATCCTGATATTGCCACCTCACTTTACAACTTG
GGTACCGCCTGGAGTGGTCTTGGTGATCCCGGAAAGGCAGTCAGGTATTT
TGAAAAGTCATTGCGGATGCGGCTGAGTATCTATGGTAAGAACACCGCAC
ATCCAGATATTGCCGCCTCACTGAAAAACGTGGGTAACGCCTGGAGCGAC
CTTGGTGATCACATAAAGTCCGTCTGTTATCATGAACTGTCACGACAGAT
GGAGTGCAGTATCTATGGTGATGACAGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00164.0Blg00164.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00164.0-exon-Sc0000026-1570713199:2170387..2170439Blg00164.0-exon-Sc0000026-1570713199:2170387..2170439Branchiostoma lanceolatumexon
Blg00164.0-exon-Sc0000026-1570713199:2169974..2170080Blg00164.0-exon-Sc0000026-1570713199:2169974..2170080Branchiostoma lanceolatumexon
Blg00164.0-exon-Sc0000026-1570713199:2163839..2168976Blg00164.0-exon-Sc0000026-1570713199:2163839..2168976Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2163839..2170439 -
Properties
Property NameValue
GeneIDBlg00164