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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:2262344..2267892+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00163.0 ID=Blg00163.0|Name=Blg00163.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5549bp|location=Sequence derived from alignment at Sc0000026:2262344..2267892+ (Branchiostoma lanceolatum)
TGTACACCTTGCTGATGTCCGGGCAAGCCGAGTAGGTCTCCGCAATGATT
CTCTGCAGGTCTTCATACCGGTGATGGGTGAACTCGTAAGGTAACTTGAC
TCCAAGTGTGGTGTGTATGGTCAGCAGAACAAGGGAAAGCCTGAGCCATA
GGTCTGCCATGTTGGGGCGTTGTAGCCTTCGTTCGAAGGATGCCTCTACA
GATGAGATATGCCGACCATCGTGTCAGGATGCTAAATATAATTCAAGAAG
AAAGTGGTGAATCTATTGGCCAATTCTGCCACATCCTGTATGCAACTTAC
ACACATCTACGAGCCGGTCTTGCCGAGGGGGGGGGGGGCATACCGNNNNN
NNNNNNNNNNNNGGGGGGGGGGGGGGGGGGCATACCGTGAAGTAAGTAGC
ATATACCTCAGATTTCGAAACATAAATTCAAACTACGTTGATTAAGGTTA
GACATACAGGTAATAAGATACGCCAAAAATAGTTACTCAGGCAACTGGAT
AAAACTCTGAACATAACTAAAAACTATTCTTTAAATGTTCACTGATCATT
GACGTCGTTTTCTTGCAAGCAAATAGCATTTTAAAAAAAGGGCGTCGCAA
TGACAACAATGATTTCAAATTTGGTGATCATGGATACAAGGCATTTAATA
GGTACCTTGATGTAGGCTGATTTTGCTTTGTTGGTAAACACAGGAAATAT
AAGATACTGACACAAAATGTGCTAAAATGTTTACAAAAATGATAATAACG
TGGCCATATGGAGGCTTCATTAAGCCTAAATATTTTTGGCTTTTGCCACC
AAAAACACTTTACGTTGAGCACATTTCAATCGCAACGCTGATAATGACTA
GTATTTTTAGCACATATACATACATGTAGGAGTCTGAGCTTGAATATTAA
CAAAGGTCTTACCCATGGCCAAACACAGTTGTCTGCTCGCTACTATGACG
AAGTAAATTTGAGGTCGCGTCAGACTACTTTGAGAGAAACTGACTGCAGC
TAAACCACGAAAGAAAAATGGCGGACAGGAAGTTGATAAACCGGATCATC
CAGTCGAAATCGGTGAGTTCCAATTACTCATGGATAGTTCTAATTAGTCC
TTACATAAGTCACCATGGAGATTTTTCATTACTGAGCCATAAAAAATGTG
CTTAAGTCCCTCTATCTCCAAGCAGATGTAGAATCCAGTAAAATGTTTTA
CACTCATAGTAGAGTCAGTACTACTCTCACAGTCTTTTTGGATGCCGTAG
GGGCATTTGGTGGTATTGTTATCGACTGTGTTTATTTAGGTCATGATGGG
AAGACCTAGAGAGCCGATCCCTCTCTTTCATTGCCCTCTACCTACCTTCA
ATCCCGACAGCCTTTTTTATACTTAGGCGGAGTGAATTGAAGTCGATTAA
AAGTGCGTTTTTCAAAGATACGAGTTCTAAAAAAATCGAACTCGTGACCT
CTCAATCTGGTCACAGCCAGTTTAGCCACACTGGGCCAGTCGACGCCAAA
AAAGTAGTAGAAGGGGGATAACTAGTAGAAGGCGAATAGCTCAAACAATG
CGGACTACAAGAAAACCGCCGGCCGCTAAAACACCTCTAGAACGCACTAC
ATCTGCTTAGAGAATACTAGGGTCCCTGCCCTATAGGGCCCTTTATTCAG
GGTCAGTAGGATAGGTTTATGATGATCCACTGACTTTGTCCCACATTTAT
ATTCAATTTTTAAACGGGACGCTCGCATACTTTTCAGGTTTCCAACAATC
ATTCAAGTTCCAGTAACGTGAAAAGTTGTACCTTGTGTGTCTATCAGAAT
GTCTTGTACACAAATTAACTGATTTCCTGGTTCGTATTTATGCCCATGGC
TTTATTGCAAAAAGTAGTTCCTTCACAACACCAGCATGGATTTCTTACTA
TATATTAAACAGATGAAGACACACATTATAGACCATCATCAACAACATCA
TCATAACACTGTAAATGGAAAAATCAGTTGATTACACAAATATATGTTTT
TAAAAAAACTACACCGATAGGAACACTAAGCGCTACATACACCCAGCGCT
ACATACAAAATTACTAATAAGACAATGTGACACATGGAGCCCAAAAGAAA
TGATAACTTGCAAACAATCATGCTCATCACCCTCTGAAAAAGTCACACAA
TTAAAACTAAATTAATAGTAATCTTCCAGAGTTGAATAAAAGATGACATT
CATACATTTTATAGCAATTCCTTTATAAACAATTCTAATAACAATTGCAG
AACAGCAATACTACGGTATATTTGTTGGTGCGTTTGTCAACCAAACAACA
AAATGCCATATGTCTTGTTAAACCTCTAGATCTATCACCAAAATATTCTT
CAATCTATTGTTTTGGTTTTTACAAACCTTAATGTTTATTTTCCTTTTGA
AACGTTAGATCAATTAAGAATATATATAAATTTGTATTGAGACCTAGATG
AACATCATCAAATGAATTCTATCACCAGACTTTAAGAAACATTATAATAG
ACAAAATTATGAGAACCTACCCAATTCCTAGAACATGATTGTTCGATATT
ATAGCTACAGTATAAGAAGCATATACGTTGTTTTTCCTACATACAGTGGA
ATAAAATTCTCTATTTTCATATTCAGATTTTCTTGTGTGAATTGACTTGG
AATGTTATAGAAACTTCCTCTACTAGAGAAAATGCAGTTGTTAACATTTG
ACTGGTCGAGTCCAAATAAAATGATCATTAGTGTCCATCTCAATTAAAAT
TCAACCATGATAGCGTAACGGCTCGACTAATGACAGCGTGGTTGCATTTC
CGTCAAATGGTTGCATTTTTATGCACTCTCTCATTGGTGCAACTTGGCAT
GCTATCATTGGTTGAACTGTAAGTTGTCATGGACAGTAAGGATCGGTCTA
TCTTGGTAACATGCAAATTACAATGATCAAATTTTCCTTGTAATATTATA
CTTTTCTTGTGACAATACATTCTCTTCATATTTTTTCTAAGATATAGCGT
GCACTAGCTTTAAAACCACGTTGATTCTTGCCCATTTATTTTTCATTAGA
TGTGATGGAAAGATGAGGAAATACGACTTGCTAGCATTGCTTGACGATTC
TTGCATGTCACGTGGTTGCCTGTAAAACTCCTTTCTGTGAACAGAAATAA
TGCACGATTTAAAATTGATGCTAACATATAAATTAAAGCTGCATTTAACC
TTTGTTGTAATTTTACTTCCATAAAGATATAGCAGAACAATTGATATGTG
AATGTTGATATTTAGTAGAGTTTACTGACAATTCCTCATTCGTCACAGCT
TACGCAGAGAATGGTTCGATACAAAGTATGACAGTTTTGTTGTTGAAGAA
AAATAGATTTTATTGATCTACGGTAACATATCTCTGTTGCAATGTTATTT
TCTTCTACTTGTTACTGCTGACGTAAAGAAAAGCTACAGTTGCTGCACTT
ACAGTAAAAGTAGTAATACTGAACGTCGAGATACTTGAATTATTGTTCGA
TATTCAGTGTTACAGTTTTGCCAATGAAAAGTAAATGTTATTGATCTTCG
ATTACATATCTCTGCTGCAACGATGGTGTTTTTTTTCGTCTACGTATCAC
TGCTGGCATTAAAAAAAAACTACCGTTACTGTACTTACAGTAAACGCAGT
AATACTGAACGTTGAGATACTTGAAGGTTCCGTAACAGGGGTCCCCGAAC
ACGCTGTTGGAAGCGCGGACTGAGCATGTGCGTCTCCCGTGGCATCGGGC
GCTCACTGCGCTCCAGCTGGACGAACTACGGCAGCGGGTGGTCCTCACTG
GCCCCCCGCAGACGTGGCGACCCTGGTACCGGCCGTAAGTAGTAGCTGCC
ACGTAGATCCTGCGACTCCAGGGGCATACCAGCTGGGCTGTTTGGTGTTC
ACATGCGAGCACATTTCGGGGGTTGGTATAACGATCTGCAACGACAAACA
GTGCGTAAACTCAACTACAAAAGAAATGAATAATAAACCGGTACTTTTGC
AATAAGATGAGTGTCACTTGCTTTTAAAAAGAAATGTTATGATTTTTTGG
CGTCGTATGGCGTAATGGTAAGAACATCAGGCTTTCAAACAAGGGGACCC
GTGTTCGATCCCCGACGTTGTGCCCTTGGGAAAGGCATTTAACACAAATT
TCCTCAATTCACTCAGGTGAAAATGAGTACCTAGCCTAGGTTAGGGACGT
CCGTCGGATAGGACATTAAATGGAGGTACCGTGTTTGGGGAGAGACACAC
CCCACGCACGTTAAAGATTCCACCACAACTTTAGAAAAAGAGTAGGGGCG
TGCCCCATTGTGCGATGGTTCAAACCTTTAAGGTTACAGTCTGATTTGAC
CCGATCCATGTCAGGAATTGCCGATTTCTCGGCAGATGGACATACGTGGT
CAGGTAGAAGAAGAAAAAAATTATTGCCATGAGTTTTTTTCTCACCACTT
TCCATATGAAGCAGGCATGTGCTGGCCACCATGGTGGTGTCAGTATTTGC
TTTTCCATGGATCGTAGCTCAATGGTACACAACACTTTTGTGTTTTGTCG
GCAAAATGTCAAGTCTCCTTCTGGTGTCATAACGTTATATTTTATTATGC
TTATAAGATACTAACTTACCTTTCTGTAACATTGATAAATATTGTGAATA
AGGTTTGAATAAAAAAATAGAAATAAGAAATAAAAAAGTCTCCTTCTAGT
AATCTTGTCTTTGTGCTGTAGATATTCAATAGTGATTGTTTTAAAGAGAG
TCAGAAGACCTTTGAATATTCGAATACGTTTGAGCTACGATTCACTGAAA
TTCAAAAAATGGACACCAACATGGCGTCGGACAAGCGACGTCACGTAAAA
GCGCTTAATACGATTGTTCTGAGCATACAAAGAAGCGCCTTTGTCATATC
ATCCTTTGGCCAGCCCAATCTTTAGCCTCTACCAGGCTCCAGGCTTTAGC
CTCTACCAGGATCCTAGCTGGAAAAAAACTAGAAATCAGTCGAATAGAGG
AGTTGACCAGCCAATATGTACAGTTTGCCACGTCGGCGCCTATCAAGTAG
TTATTAGTGGACTTCAACGAAGATGGTGACTCCCGACATCCAAACGTGGC
AAACTGTATCTATAGCCTGGCCAACTCTTCTTCTGGCCAACTCTTCTTCT
GGCCAACTCCTATTCTACTCTATGAAGCCAGACGTCTGAAGCCTGGTAGA
GGCTACCAAAGCTATAAGCGCTAAGCATTCCTTCTTAAAGACTAATCATT
CACTTACTGACACACGAGTGCTTGACTTCCAGATACTTGAATGTTCCGTA
GCAAGGATCTCCGAAGACGCCGTTCGAGGCCCGAACGTAGCAGCTCTGTC
GTCCCTGGCAGTAGCTCCTGACCCTGTACAGACTGGTCCCACTTCTACAG
TCAATGGTCCTTACTGGCCCTCCACAGATGCCGTGTTGGGTGCGGCCGTA
CAGGGCGTACTCGATGTTTATCTGACGACCGTAAGGACATCGAAGGTACA
ACCCGCCATGTTCGCAAACCCGAGAGGTTATAGCTGCAGGGACACATAA Coding sequence (CDS) from alignment at Sc0000026:2262344..2267892+ >Blg00163.0 ID=Blg00163.0|Name=Blg00163.0|organism=Branchiostoma lanceolatum|type=CDS|length=312bp|location=Sequence derived from alignment at Sc0000026:2262344..2267892+ (Branchiostoma lanceolatum)
ATGGCGGACAGGAAGTTGATAAACCGGATCATCCAGTCGAAATCGATACT
TGAATGTTCCGTAGCAAGGATCTCCGAAGACGCCGTTCGAGGCCCGAACG
TAGCAGCTCTGTCGTCCCTGGCAGTAGCTCCTGACCCTGTACAGACTGGT
CCCACTTCTACAGTCAATGGTCCTTACTGGCCCTCCACAGATGCCGTGTT
GGGTGCGGCCGTACAGGGCGTACTCGATGTTTATCTGACGACCGTAAGGA
CATCGAAGGTACAACCCGCCATGTTCGCAAACCCGAGAGGTTATAGCTGC
AGGGACACATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00163.0-exon-Sc0000026-1570713199:2262344..2262433 | Blg00163.0-exon-Sc0000026-1570713199:2262344..2262433 | Branchiostoma lanceolatum | exon |
| Blg00163.0-exon-Sc0000026-1570713199:2263272..2263405 | Blg00163.0-exon-Sc0000026-1570713199:2263272..2263405 | Branchiostoma lanceolatum | exon |
| Blg00163.0-exon-Sc0000026-1570713199:2267626..2267892 | Blg00163.0-exon-Sc0000026-1570713199:2267626..2267892 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:2262344..2267892 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00163 |
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