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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:391586..398643+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00162.0 ID=Blg00162.0|Name=Blg00162.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7058bp|location=Sequence derived from alignment at Sc0000026:391586..398643+ (Branchiostoma lanceolatum) AGATCATCTCATGCTTTTAACAAACGAACGTTAAGTCTAAATACAGGTTT
TCGTTTTAGAAATGAGCCGACACAATATTTGTTTTGGACGATTTCTTTCA
TTTCTAACTGAAAGAACTCAGGGTCATTCCTCCCTGCGTTCGATTTTTCC
TGTTTACGCCGGTTGCCATGGACACGGGTTCCACACAGATGACAAGGTTC
TGAGTCCGTGAACTAGGTGAGGAATTTTGTTCTTTCTTGTTTAGACGAGA
AAAATAGATTGAAAGAACCTGGAAAAAGTTACAAATCTTCTTTTAATTCT
ACGTTTAGATGTTGTGTACACGCCACGAAAGCTTTCAGAGGTCCAAAAAA
GCGCTAATTTTGTAGCTAAACTAAGCAGAAACAAGTTCATGTGGCGCTCT
GTGACTAAGGCTGACTAAGGTTCAAGGTCACCAAAGTTTGTAAGGACAAT
TTCGCACTCAACAGAAAAGACAGCAGTTTTATTTGTTCTTAGGAATATAT
CTATAAACCGACAAATGTATTGTTGTTGCGGAGTAAACCAGAGACACTGT
GAGATACATTGAAACGTTGTAGGTCTGACGTTCTGAGAAGTCGAGAATTC
TGAAGTCTGCACGACTGTGTCGACGTGACGAAAAAATGACTATGGAGTCG
ATAAAGGTAAGTTGTCATTTCCTTGTTTTTTCTTCTTCAAAACATTAACC
AAAAATGTCACTTTACGGAACAGTTGGACACCAATTGTGTACTTTGACCT
CCCCTGCGCCGTATCATTTCCTTTATTTCACTTAATCTCTCTACGACTCT
TCAGAGATTTCAGTTAAGGTGAAGAAATTCGCCAACTTTCATTTCCCCTC
ATAGTTCGCCATTATTCATTCTATAATCAACATGTTTACCTTTTGACTTT
GCTTTTCTTTGTCTGCTCTGTTCTGTTGTGTTGTGTTTGTGTTTTTGTTC
TCATTCCAGCATGTTTCCTTTCTTACTCTCAGCAGAGTCAGGGAGAAGCA
GCCTTCTCTAGCCAGTAAGAAACTGTTTAGTCAGTTTGATGATGTCATTA
TGATCATGATGATGATGATGTCAGAAGTAAGAGGAAGGAGCGGGAATGAA
TGATCATGATCCTATCTTGACAGCTACAACTTATAGTTTATATCTATCAA
GATAGGATCATGATGATTTAAGTATCATCTTGCTTAAGGCCATACCAATG
TACTTTCTTGGTTCTTGCCTTTTTTTGTATCAATAGAACAGGCAGGCAAA
AAAAAGAAAGGCATCCCTTAACTTTCTGGTTAAGGTGGCAGAACACAGTA
TTTCGCCTATGGGGATTTCTATAGTTAAGGACCACAAACTGACTGAGGTC
GACGCCGAAAAAAATATAGTACGGTGCATTTCTGAAGCACGACAAACGGA
TATGTTTAAATTGAGGGTACATTCTACAATATAACTGAAAACAAAAAAAA
GTTGTGTTTTTTTTACGTTCTGGCGCCCTCTTTTGAATGGGGTCATGCGA
GGTCATACGAACTGCAGCCGACTCACCCAGGCTGGCTGCTGCAAAGGTCA
CGCGCATGTATACACCGAATCGGCAAGCTTCACAATCTTACTCATACGAT
CGAAATGTCGACTTATTATGCTATCATTCAGTAAAGTTCATGCCTCGCTG
GCTTTCACGTTCAAGTGTATACATGCGGTCCACGATTTAGTGCGCACTAT
TTTCTTACCCCGCGTCATAGACCCCGGGGGTCGCGGACAAATACTGTGTA
CTGCCACCTTAAGAAAACTTGAACTTGACTTTTTTTTCATTCAATCAATA
AAACAAGTCAGGCTGGAGNCATTTCAAACAATGTGTTTTGAACTTTTCAT
GCATTGCTGTATAACAAAAAACAATATAACGTTATAGCAACTAGATTATT
GTGGTGTTGATTCATATTTTGAATGGTGCATGCAAGAAACAAAGAATCTG
TACATGTGTGGCCTTATTCAATGAGAATTGTTGTATCTTGTCCATCGCAG
GAAGTTTTTCAACTGTTTTGTGAAAGAAATTGCGAATGTAATATCAGTCT
CTGCACCTTGATATTATCAGTGATGAGACATGAAATAACTCATGTAGTCA
TTTAGTAAGAAAATTTCTTATCAAAACTGCAAATTACTATTCATCTGCAA
CTGTGTTATCTCTACTTTGTGCTGAGTCAGAGACTATGCATGTTACACAT
ATTTCAGGACAGTTTGCAGTGACATTACATCACTTTAACTGTCTTTATCT
GCTATTCCTTTGCAGTCTGAGGAGAGATACAGCTTCAGTCCATTGGCAGG
AGACCCTGAATGCTCTTCAGAGGTAAGTACATGTAATATAGCGGTAACCA
TTATCATCCAATTTATTTAAAGCATCATTTATCTAACAAATGCACAGAGC
CAAATGTGTTCAAACCCTTTGCAAGAAATGTCAGCTCTTCTAAAGATGGA
TGGTGTGTGACTTTTCTAAGCTTGTTTAACACTGTGTGTATTTGTGTGCA
TGTTTGTTTGTGCCTGTGTGTGTATGAGTTAAGTTTGTGTGTGTGTGTGT
GTGTGTATGTGCGTATATGGATGAATGTGCATGTCTGTCTGTGTGTGTGG
TGTATATGTGTGTGTGTGTGTTTATATGTGTGTGTGCACATGTGTGTGTA
TATGTTCATGCAGTTGTGTGTGCGTATGTATGTAAATGTGTATGTGTGTT
TATGCGTAAGTTTGCATGTTTGACAATGTTGTGTGTGTATATATGTGTGT
GTACGTACGTTTGTGTGTCAGTCTGTGTTTGTGTGTGCGTGTGTGGTTGT
ATGTAACATGACATTGTGTATTTGTGCGTGCATGTCAATGTGTTTGTATC
TGTGTGTGTAAATGCCGGTATGTGTGTGTGCATGTGTGTATGTGTGTATG
CATATATTTGTGTCTGTATGCATGTTTATTTGTGTGTGCGTGTAGATGTG
TTATCGTCTCTGTGTCTGTATGTACTGCGTGTATGTGTGTGCAGGTGTGT
GCACATTGTGTTTTTGTGTGTGCACGCACGAGCATGTATGTGTGTGTATG
CGTGTGTATATGTGTTGTGTGTGCGTTTGTATGTGTGTGTGTATGTGTGT
ACGTGTATGTATGTATATGTGTATACGTGTGTATTTGTGTGTGTGCGTAT
GTGTGTGTCTGTGTGTGTATATAGGTGGGTGTATGTGTGTAGTTGTATGT
GTCTGTGTGTTTTTAAGTGTGTAATGTCTTTGAAGATTTAATGCAAAGTT
CGTTATACTTACTACTTTTCAGGGAATGCAACACATTTCTGGAGCTGACT
CAACAGTAAGTTTGTTTCCACACTTTGTTATTCCACAAACATCTAAAACA
ACAAATGTTTCCCCGTCTTTTTGAAATCACGCTGTCCAAGTGCCTCAAGA
AAGTCCTACACAGTGTTACAGACCTGAGCTTTGCAAACTTGAGATGGCGC
TTGGCTATAATATAGGGTTAATGAACCGCCCTGAGGTCTATATGGTGTGA
TAAGGCATGGTCGTTCCTATCACACCATGCCTTATCACATCGTATAGACT
GAAGGAAAGCGGGTCATTAACGTTATTATCATATAGCAATTGTCCATGTC
ATGCTAGTAGTTAGTAGTAACGTTACTGTGTGCAGTATTAAATTTTGTGT
CATACCTGGGCCGCCCAAACGTTCGCTACGGGTGTTCCGCATCACACGGG
GTTCTATAGAATGTTTAGAATGAATTTCGAGTGTTGCGGTGTAGTATTTG
TCTTAACATGAAATATAAAAACAAAAACCCCTGTCATTTAATGGTAATGT
TCGAACACCGGGTCCATAAAAAGTTTATAGAAGATTAATGACCTGCTTTT
TGGGTCTGTTTGAAGAATGCAGGCCCGCAAATGGAGCCTTCTGATTGTTC
GACGACATCTACCTATATGATAATGCATAATATAGAGCACTACTGTTTAT
TATTATGACAAAATCATATTTGTAAGGACAGTGACAGAATTGATGCACTT
CACGTTTTCTCCCTGAAACAGGCAAGCCAAAGTTTCCGAAGATGACCTGG
CCAGGTCTTCATTCAAGATTGCTGAGCTGGAGATTCTCCTCGCTGATTAT
AAGCTGTAAGTTTGTTTTTTCTTTCTGTCTTTATCATATTTTTGACAATT
TGATTTCTATTTGGGTCTGGTTTCTGCTACACTCACAATAACCTTTGCAC
AAACCCAAATATAATAAAAACACTTGAACCTCCTGTGTTGGTGAGAAAGT
ATATGTATGCAGTGGAGCCCTTATAGTAATTTAATTTACATTTTCTAAAC
TTGTGACTGGAATAATATCATCAATCATCTGATACAATAAGCGATTTTTT
TCAGCTCATTTGATGACTGGACTAGTATAATCAATTATCAATTTTAATGC
ACAATTGTTCTTTGATTATCATAGGCAAGCAGATGATGCCAAGGTCAGAC
ATGAAAGGTAATAACATAAATTTGAAACTTAGTTTGTGTTCCATCTTTGT
AGTTCATGTTCAAATCTAAAGTTGTTTTGCAAGTTGAAATTACAGTACAC
CATTGTCGATATCTATTATGCATTGACCTAGTACATGATTGTGTTATAAG
CTTGCGTCAGTTCAGTTCTGAGCTGAACTTTCCATATTAGAATGGGAATT
GTAAAGCCGAAAATATCATGTGACTTACCATACAAATTCTTCATGAAATG
ATGCTAGAAAAATGTTTAGTCTGAATACTTTTACCTAGCCTGATATCAAA
ACATTTTATTTTTTCAAGCATTTATTTAATTCTTCTGTAACAAGTAAAAT
ATGTCTTTCAACACACATTTAGTTTCCATGATATTATGAACTTTTGTATT
CATCTCAAGAAATGCTTGTATCAAATCTGAATATAATTTGTTTACAAACA
CAGGGAGCTCTACCAGTCTCGTGCAGACCTAGTAACGTGAGTACAGTAAT
AACAGACATGAGAAATTAAGGTTTAGTTTTTGGCATGTCTGTGTGTCTGT
GTGTGTGTGTGTGTTGACTATCTGGATTTTTTAGTCAGCATAATTCCAGA
ACCTCTGGATGGATTATGATGATATTTGGTCTGTGGGTAGGTCTTGTGAA
GACGAAGGTCAAGGTTCATTTTTGGGCCCTTGGAATGTGACTTTGTTGTT
TTAGATCAAAGAAGTTGTTCATTTTTCTAATTGTAATTCAGGACAATTAA
GTATAGAATGGTAGAAAAGAAAACACACTTTGCCTGAGGTCTATTATCTC
CTGAGAAGTAAATGCGATGAGAGTTTCTAAACAGGTGACTATTTTTGTAG
AGCATCATTAACTGAATGATATGGATTTAATATTTTACTAAATTCATCTT
AGATAAAGTTAAAGTTGAAAAATCCTTACATGTAAGGAGACAAATGTAAA
GACAAGAAGATTGATAAACCTTAGTCTTTGTACATGTACAATTCATATAA
TGTGCACTTTGTCATCTCTATTTATCAGGGCCATGTGTGAACTACATGAG
GAAAAGAAAAGGTTTGTAGATTTTTATTGCTTTTCAGTGTAATTTCTTCA
GTCTGAACAAGCACTGTAAATCTTTATATATTTGCGATGGTTTTATTTTT
GAGGTTTTCATGAGGACCTTTCTGTTGCAAAATCAGGACACCACATTTTC
AGTGTATTTTTTAATTCCACAGCATTGTTTCCGACACCAACTTAAAACAC
CACAAAAACCTCCTTTCCCCTCCTTCCAGAAAATCAAATTACTGCAAAAC
ATGATAAATTTACAGTAGCTGTGAAACAAGCAAAATGGGGACACACTGAC
TAGTCCTTCAAAGAGGTTCCATGTTTTATATTTTTTTCTTGAAAATTCAA
TTCTAGCCTGTTTATGATGTAACGTCACAATCTGAAGAGACGAATTGATC
CTTAAGAATACGACATTGTCCTTACAATGAAACTCTGGTTTACGGATCCA
CAGAATTTGATCCAGATGGTCAAGCAGTGGTGTGGCGTTACTTCTCGCGC
CACATGGACGATTGTACTGCATGTGTGGCGTTGTTTTTAATTTCGGGTTG
ATATTTCTTTCCTCTAGAAAATGTCTTGATGTTTACCTTCCAATCTTATT
ATCTCCTACAGGTGTGCCCAGAAGAACATGAAGATCACTGATCTGAAGGA
ACAGGTGGCTGCTCTGAAGGCAGGAGGAGACTGGTGAGTAATAGCTTCAG
TATCTTTTTGGCAACACCTCAGGGGTGGAGGCACCTTTCATTCCCACAGT
CCAGAACATTAAGAAAATATTTTTGATCCTCAACCACCTATGATGAAGGC
CATCAATTTGCATTAACAACTTGCATTAACAACTTGGTGTTAGGCTAAAA
AAATATAGTGGAAAGGTAACCTTTGATGTTTGACTTATTTCCAGTTTCGA
CAGTCAAGAAGCTGTGGAGGCACAAGAGCTTAGCGAGTTTCGTATTGCTG
AGCTCGAGATCCTGTTGGAGGAACAGAGGGAGTGAGTCAACTTTGTGTTT
TTTTTCACCAATATGAGTAAAACAATATGATACAATTACTGGTAAATCAT
CTCAGCGAATCCATTCACAGAATATTTCACTGTAGTTCCAAGTAAAGCTA
TGATTGTATTGTTTTCCAATTTGTTACTTTTCAGAAATTGACAAGAAACG
TGAATTCAATATCAATTGTTACAATGAAGTATGCGCAAGAATTACCACTT
AATTCAAATAAGAAACGTGAATATTTGAGACTAAATACACATGGTTTTAT
TGCAATTTCTGCTGCCCTGCAGTGACAACACCATGCTGAGAGCCAAGCTG
TTGTCAGAGGAGGATAAGAGGCTGACAGCTGAGATGCTGCTGAGTTCCTC
CTCTACACAGGAACAAGAGATGGGAAAACGTGGAGGACTTGGTCAATCTG
TACTAAGAAAAGCAGGGAAAATGTTGTCACTGATTGATAAGTTGAGGAGA
TCCTCTGTTCCCCGTAAACACGAGAAGGTGTTGCTCAAGATCGGCAAGAA
GTTCCTTGGACTAGTGGTCGCAGGAGGATCCAAAATGTGCCTGCAGAAAA
ATAAATAG Coding sequence (CDS) from alignment at Sc0000026:391586..398643+ >Blg00162.0 ID=Blg00162.0|Name=Blg00162.0|organism=Branchiostoma lanceolatum|type=CDS|length=753bp|location=Sequence derived from alignment at Sc0000026:391586..398643+ (Branchiostoma lanceolatum) ATGACTATGGAGTCGATAAAGTCTGAGGAGAGATACAGCTTCAGTCCATT GGCAGGAGACCCTGAATGCTCTTCAGAGTTGTGTGTGCGTATGGAATGCA ACACATTTCTGGAGCTGACTCAACAGCAAGCCAAAGTTTCCGAAGATGAC CTGGCCAGGTCTTCATTCAAGATTGCTGAGCTGGAGATTCTCCTCGCTGA TTATAAGCTGCAAGCAGATGATGCCAAGGTCAGACATGAAAGGGAGCTCT ACCAGTCTCGTGCAGACCTAGTAACGGCCATGTGTGAACTACATGAGGAA AAGAAAAGGTGTGCCCAGAAGAACATGAAGATCACTGATCTGAAGGAACA GGTGGCTGCTCTGAAGGCAGGAGGAGACTGTTTCGACAGTCAAGAAGCTG TGGAGGCACAAGAGCTTAGCGAGTTTCGTATTGCTGAGCTCGAGATCCTG TTGGAGGAACAGAGGGATGACAACACCATGCTGAGAGCCAAGCTGTTGTC AGAGGAGGATAAGAGGCTGACAGCTGAGATGCTGCTGAGTTCCTCCTCTA CACAGGAACAAGAGATGGGAAAACGTGGAGGACTTGGTCAATCTGTACTA AGAAAAGCAGGGAAAATGTTGTCACTGATTGATAAGTTGAGGAGATCCTC TGTTCCCCGTAAACACGAGAAGGTGTTGCTCAAGATCGGCAAGAAGTTCC TTGGACTAGTGGTCGCAGGAGGATCCAAAATGTGCCTGCAGAAAAATAAA TAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00162.0-exon-Sc0000026-1570713199:391586..391801 | Blg00162.0-exon-Sc0000026-1570713199:391586..391801 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:392158..392241 | Blg00162.0-exon-Sc0000026-1570713199:392158..392241 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:393851..393907 | Blg00162.0-exon-Sc0000026-1570713199:393851..393907 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:394249..394262 | Blg00162.0-exon-Sc0000026-1570713199:394249..394262 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:394858..394890 | Blg00162.0-exon-Sc0000026-1570713199:394858..394890 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:395607..395690 | Blg00162.0-exon-Sc0000026-1570713199:395607..395690 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:396010..396042 | Blg00162.0-exon-Sc0000026-1570713199:396010..396042 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:396489..396521 | Blg00162.0-exon-Sc0000026-1570713199:396489..396521 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:397064..397096 | Blg00162.0-exon-Sc0000026-1570713199:397064..397096 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:397697..397768 | Blg00162.0-exon-Sc0000026-1570713199:397697..397768 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:397980..398066 | Blg00162.0-exon-Sc0000026-1570713199:397980..398066 | Branchiostoma lanceolatum | exon |
Blg00162.0-exon-Sc0000026-1570713199:398358..398643 | Blg00162.0-exon-Sc0000026-1570713199:398358..398643 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000026 | genome | Sc0000026:391586..398643 + |
Properties
Property Name | Value |
GeneID | Blg00162 |
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