Blg00159.0 (mRNA) - B. lanceolatum

Overview
NameBlg00159.0
Unique NameBlg00159.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1580277..1582917+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00159.0 ID=Blg00159.0|Name=Blg00159.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2641bp|location=Sequence derived from alignment at Sc0000026:1580277..1582917+ (Branchiostoma lanceolatum)
CAGCACACCAAGGTTTATAAACTACAGCATTCACCTCCTGTATGATAAAG TGTACTACGTAAAGTACTGACTGTACTATCCTGGCCATCTTGACTAGATG AATAAAATCTGTGTCATTCAGTTATACGTTTTACACCACGATACACACAC AGTACTGCTGTATAACAGAAGTGTCCACTTACGCTTTCTGTCCATGGCAC TGCAGGCTGATCTACAACTTCACCAAGGGCAGGTTACTTAGTCCTAACTT AGGAGCGATGGATCAAAACAGTACGCAGCACGTACAACTCACACCGTTCT GTACTGTACTTCAACGGACGAAGTCCTGTCAATGGGATTGCTTTGGGCGA TGCAAAATCATTACAGCGGTTTACACCGCGCGATACCGTACTGTGTACAG TAAGTTCAATGACACGCGTAGACCACATGGTCTGTAGAGGTGTTAACAGA AGTTGTTACGGATTGATAGAAATTAACTATGATTAAAACATATCATCAAC AAAGTGTACTGTTGCTAAATAGACAGAAAATGTTTGAATTTGTGTTTGTT ACTGTATTGGTATGGTCCTGGTGTAATGTACTGTACATCCTGTGGTGATT AGGCTTGTCCTCTGAAGACCTGTCATCAATTTGTATCACAACATGATGCG ACAAAATTGACCGGATGCTAAATGGCAGTGTGATTGGGAAAGAAAACAAA AACAAACCAAAAATCCATCTTAACCATAAATGGCAGGGTGGTCCCAGTCG CTGTGTCATTCTGCCCTCATGTAACCAATTACGGTTCAATAAAGACACAG GCCCCAAAACTGTCTACAGCAGTCTTGACCAGGCAACCAAACTGTGTGTA CTGTACATCCATTCTTTCCTACACGATGTCGCTTAAGAAGCGCATGGACC TGACTTTGGCCGACAAGGTCAAAGTCATCCAGATGTTGAGCAGCGGACCG AAGCTTTCTCACTCGGAGGTGTCTGAGAAGTTCGGGTGCTCAAGGTCGCA GGTGTCTAGGGTGTTTAAGAACCGGGAGACCGTTCTCAAGCAGTGGGAGT CTAACAGCAACCCAAAGCAGAAGAGACAGCGAGAGGGGAAGGATGGTGAA GTTGAAGAGGCTTTACACCGATGGTTCGTCAACGCCAGGGCGAAGGAGTT CCCCATGTCTGGCCCCATCCTCATGAAGCAGGCTAAGAAGTTAGCAGACA GCCTAGGTGTTACTGACTTCAAGCCTACTGAGGGATGGCTTAGTAGGTGG AAAGTCAGGAACAACATCGTTCATAAACGTCTCCACGGGGAGAAGAAAGA TGCAGACAGCGAGTCAGCGGAAGACTGGGTGAGAGATGTTCTGCCCGCTA TTCTACAGGAATACGAGCCTGATGACATCTACAATACTGACGAAACGGGC CTGTACTATCGCGCCCTTCCGAAAGGAACTCTGGCAAAGAAAACGGAGCC AGTCGCCGGTCATAAAAAAGCGATGGACAGAATCAGTATCCTATTCACAT GCAACATGTCAGGCTCGGACAAGCTGACACCACTTGCGATAGGCGTAAGC AAGAAGCCACGTTGCTTCCGGGGCCAACACGTACCACTTCCGTGGTACGC TAACAAGAAAGCGTGGATGAATGGAGAAATCTTCCGGGAGTGGCTGCAAA ACGTGGATAAAGAGATGGGGCAAAAACGCAAGAAGATCTGTCTACTGCTG GACAACTGCACTGCCCACCCAAAAGACGTCAACCTCCGCAACATCCGTCT CGTCTTCCTGCCAGCCAACACAACTTCCATCATCCAGCCGCTCGACCAGG GCATAATCCGAAACTTCAAGGCCCTCTACAAGTCTCAGATGCTGCAGCGC ATCCTGAACGACTTGGACAATGGGAACATCGACAACGCACAGAAGATGGC GAAGGCGACATCGGTGCTGGATGCGCTGTTTATGACAAGAGAGGCGTGGA GAAACGTCCAGCCGTTGACAATTCAGAACTGCTTCAGGAAGGCCGGACTC ACCATTATCGTCCAACCCGAGGACAGCGACACTCCCCAGCCCGCCGAAAT TGTCGTCCCTATACCAGAGGGGATGACAGAGGAAGAGTTCAACGAGTTTG TTGACCTTGACGCCGACGTGGAGTGCACCTGGGACCCCACTGATGAAGAA ATCTGCCAAGAGGTGAGGGAGTCCCGGGGCACCACTGCCACCACCACCGA GGCAGAAGACGACGTCGACGTCGAGTCCTCTCCTCCACCCGTCCCATCCT CGGCAGAGGTGAGTGCAGCTCTGGATGTGCTCCGTCGATGGATGCAGTGC CACGATGACTCAGAGTACAGTCACTTCGCACGGATCGAGGGGAAAGTCCA TGCCTACTGCCTTCAACAGAGCAGGAAACAGAAGACGATGACAGACTTCT TTCAAGCAACCTCTAAGTAGGTCTTCCTCCGACATCACAACGAACTGTTC TATAGATAACTGCTGTTTGCTCCACACCTCTCCATGTTATGTGAAAGCAA CGTTTCCAATTCAAATCTCCCGCCGCAAGATTTGCCGAATTGACTGATGG GATGTTGACGTTTCTGTAGCGACACTAGCGACGCCATTTTGTTCCTTATT GGGGCATTTTGACGACAGAGTTTTTCAGTGTAATTCCTGGA

Coding sequence (CDS) from alignment at Sc0000026:1580277..1582917+

>Blg00159.0 ID=Blg00159.0|Name=Blg00159.0|organism=Branchiostoma lanceolatum|type=CDS|length=1545bp|location=Sequence derived from alignment at Sc0000026:1580277..1582917+ (Branchiostoma lanceolatum)
ATGTCGCTTAAGAAGCGCATGGACCTGACTTTGGCCGACAAGGTCAAAGT
CATCCAGATGTTGAGCAGCGGACCGAAGCTTTCTCACTCGGAGGTGTCTG
AGAAGTTCGGGTGCTCAAGGTCGCAGGTGTCTAGGGTGTTTAAGAACCGG
GAGACCGTTCTCAAGCAGTGGGAGTCTAACAGCAACCCAAAGCAGAAGAG
ACAGCGAGAGGGGAAGGATGGTGAAGTTGAAGAGGCTTTACACCGATGGT
TCGTCAACGCCAGGGCGAAGGAGTTCCCCATGTCTGGCCCCATCCTCATG
AAGCAGGCTAAGAAGTTAGCAGACAGCCTAGGTGTTACTGACTTCAAGCC
TACTGAGGGATGGCTTAGTAGGTGGAAAGTCAGGAACAACATCGTTCATA
AACGTCTCCACGGGGAGAAGAAAGATGCAGACAGCGAGTCAGCGGAAGAC
TGGGTGAGAGATGTTCTGCCCGCTATTCTACAGGAATACGAGCCTGATGA
CATCTACAATACTGACGAAACGGGCCTGTACTATCGCGCCCTTCCGAAAG
GAACTCTGGCAAAGAAAACGGAGCCAGTCGCCGGTCATAAAAAAGCGATG
GACAGAATCAGTATCCTATTCACATGCAACATGTCAGGCTCGGACAAGCT
GACACCACTTGCGATAGGCGTAAGCAAGAAGCCACGTTGCTTCCGGGGCC
AACACGTACCACTTCCGTGGTACGCTAACAAGAAAGCGTGGATGAATGGA
GAAATCTTCCGGGAGTGGCTGCAAAACGTGGATAAAGAGATGGGGCAAAA
ACGCAAGAAGATCTGTCTACTGCTGGACAACTGCACTGCCCACCCAAAAG
ACGTCAACCTCCGCAACATCCGTCTCGTCTTCCTGCCAGCCAACACAACT
TCCATCATCCAGCCGCTCGACCAGGGCATAATCCGAAACTTCAAGGCCCT
CTACAAGTCTCAGATGCTGCAGCGCATCCTGAACGACTTGGACAATGGGA
ACATCGACAACGCACAGAAGATGGCGAAGGCGACATCGGTGCTGGATGCG
CTGTTTATGACAAGAGAGGCGTGGAGAAACGTCCAGCCGTTGACAATTCA
GAACTGCTTCAGGAAGGCCGGACTCACCATTATCGTCCAACCCGAGGACA
GCGACACTCCCCAGCCCGCCGAAATTGTCGTCCCTATACCAGAGGGGATG
ACAGAGGAAGAGTTCAACGAGTTTGTTGACCTTGACGCCGACGTGGAGTG
CACCTGGGACCCCACTGATGAAGAAATCTGCCAAGAGGTGAGGGAGTCCC
GGGGCACCACTGCCACCACCACCGAGGCAGAAGACGACGTCGACGTCGAG
TCCTCTCCTCCACCCGTCCCATCCTCGGCAGAGGTGAGTGCAGCTCTGGA
TGTGCTCCGTCGATGGATGCAGTGCCACGATGACTCAGAGTACAGTCACT
TCGCACGGATCGAGGGGAAAGTCCATGCCTACTGCCTTCAACAGAGCAGG
AAACAGAAGACGATGACAGACTTCTTTCAAGCAACCTCTAAGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00159.0-exon-Sc0000026-1570713199:1580277..1582917Blg00159.0-exon-Sc0000026-1570713199:1580277..1582917Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00159.0Blg00159.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1580277..1582917 +
Properties
Property NameValue
GeneIDBlg00159