Blg00155.0 (mRNA) - B. lanceolatum

Overview
NameBlg00155.0
Unique NameBlg00155.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2031109..2035520+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00155.0 ID=Blg00155.0|Name=Blg00155.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4412bp|location=Sequence derived from alignment at Sc0000026:2031109..2035520+ (Branchiostoma lanceolatum)
TGCTTATCTAGACAGTAGTGGCCTGGTGAGCATATGCATCGACACGGAGC ATCTTTTCATACGTTTTGTTCACTTTTCAACAGCTACCCGTTCAGCTTTT TAGTCAGGACGCTAGTTTGGTATGTGGCCTACACTTGTATTGACTCGCGC GTGTTGTATGCGTCATATGCTTCCAGTGGTCTTGAGTTGGCCTTCGATCA TATTACAGGTGCCGCCTTGAAACCCTGCTTGGGTCGTTACAGATAAGCAC GATTACCGGTCGTTTCGCTACATTGTTAGTTTGCTACAGACATTTCGCTA CATAGCAGAAGTCGCTTCGCTACATGGTGAACGTCATGTCAATACATGCA GTAAAAATGGCTTCGCTACATTTGAATGTTATTTCACTGAATGTAACTCG TCTCCATACCATTGCAACTACTTGATCCCGAAATCAAAGGTCTGAAAAGG GAAGTGTCTTCCCTAAGTGGATTCGTCATCATATGCCCGAATGTCTGACA ACGTATTTTTAACACCAAATTTACTTGTCAACCTGAATCGCCTTAAATGC TTTATGCAAATAATGTGGGAGGTCATACTGAACAGGCAGTTTAAACAGGC AGTTCGTCTTGCGCAACGAACACTTGTAAAAGTCAATTGAAACGCAGTTA AACGTCGGGCTCCCCGGTGCCACTTCGAGGTTAACCATATACCTTTGTGT AAGTATCTTTTTGTCAATATGTCTCGAGTTATTTTGTTCTTGCGCAATGA TTCTACCTTGATTTCTAACCTTCAACGACATATAAACGTCTAGAATATAT GTCGTTAAATACACACTAGTCTTTAAGTACACATGATGCAGTTTCTAATC CTTCACTGCTTACCTTATTTTCGAATATGATGTTAAGAATCAGGAAGTTT TCCAACCCCATGGAATTGTAAGTATGTACGCAATTCGTCCACAAATGCAG AATATATCTCACATATTGTTAACACAACCTTTACTTGCCAGAACCAGTCA GCCAGGTCACAGGAGTTGTTTACAGTAAAGGTACGATACCCGAAATGCCA TTCCTAGGATTTGAACCGGGGTCACCCAGTTACTAACTAATTAGAACGAA GAGCTTAACTATGAGGCTGTTACCAGTTGAGCTACTCACTGGAAATCTCC GTGTAAAGACCATACTTAGTTTTTTTGTGTTTTTTTGCTGTGCAGTGATA TGTAACATTTAACACATTGTACGTAAGCTTAGGCAAGAAAGCTTTGTGAA AACGTAGCCATGCATTATGAACAATTGTTATCTCACGGTCAGAGGCCAAG GATGTGCAATGACTTTAAGCGCAATGACCTTTGGTATCTCTTGGTGCATA TAAATTGTGACTATGCATTAATGGAGTGAAGCTATGACTTGTCACTTGCA CACAGAAAATTGCATATTCTAAAATAAAAACCAAGTTCACGCATTTGTTT TTCTCATTTAGCATTTTGTCTTGCTGTCATCCTACAGAATCAGGTCTTTG GCAGGACATACAGTATCCTTGATGCAGTCATTGGATAAACCGCCAGATGG CGGTTGGGGGTGGATGGTGGTGTTGAGCACGTTTCTCATACACGTCGTCG ATGTAGGATCTTACAGGTCCATGGGAGTATTCTACGTGGAGTTCCGAGAG GTTTTCCAAGAAAGCGCGGGAAACACGTCCTTTATCAGTTCTGTCTTCAT AGGTACCATATTGATGTGCTGTGAGTATAACAAGTACTTCAAAATATATC ATTCAAACTAAAAACTCGTAAATATCTAACCTTCGACTAGTTTTCTGGCC TTCAGGAAAAAGTATTGATCATAAAGAGAAGAATACCAGAGGACTGGTGC AAAATTGGTAGAGTCCAATCTTTGTTTATGTTTGTTTCTTTCTTTTGTTT GAAAATAAATTGTTGCGAAAAGAATTGAACTTTTTACATAACCCTGTATA CCCAAACAGGCAAACTTCCATATCTACCCAAAGTACCATAACTACATGGA AAGCAATTCTACATAAGCTTTAAATTTACCTCAGTTTTCCAGGCGAAGTT TTATTGACAAAAAGGCAGTGATGATAATACTTTCAATACAAATCTGTCAT TGACACAATGATGTAAATTCTAAATCAATCAATCAATAAATCAACCAACC AATCAATCAATCAATCAATAAGTAAATAAATAAATAGATAAATCAGTATG CCAGTTAATTGATAAATAAATTAATCAATGTTTGTGCAATGGTCAAAGCC AAATTGCATTATTGCAAAAGACCAAGACATTATATGTAAGCTGGAATCAA ACTTTAACTTTCGTGATCACTTTTACTCTTGACGTTTATCACAGCTCCCA TCGCCAGTGCCCTGACCAACTTGACCAGCTGTCGTACCGTCGTCATGGCA GGGGGCGTCATTTCCGCCGTGGGACTCGGCCTCAGCTACTTCGCACAGAA CGTTGTACACCTGATCATAACTATTGGACTGATAACAGGTCTGTATGTAA TATCTGACGTTTGAGACCGCATTGTAAACACCGCGTGAACTACCAATGTA TATCTGTAAAAACCTTACGTTTGGAACCGCATCTGTAAGCAGCGACCCCT GTAGCTGCAGTTCGTAATAAATCGGTCAGAATTGCCATGAGGAAGGTGAC AGACGGTCACCGAAACTTCGGTCTTGAATGAAATGAATCTATTTATTGGA GTCTGTTTATTGGCTGTCTCGATCTTTTGGATGACTATAAAATTCACACT GTGGCATATACAACTAAACACATAAACATAGCCTAACGTGGTTATGTTTG AAGGCAAAATCATATGGTTTCCTACTTCCCAATCTGCCGTCTTAAGCTAG AAAACGTTAAGAAATTGCATTGAAACATCTGCTTTGAGATATCTTATGAT TACTCTCACTGTACAAATTACAAAAGCAATAGATTTTGTTATCGGTCAAA CGTTTCAGGTAGCATTTGCTACCTTTCTTCTGTGTTCAATGTTTCATACG TTGTAATAAATTGGTAGAGCAGCCTGTTGTGCAATACTAATCTTTAAAAA AAACAGGTTTATATTTACATATCGGTTTGTTGAATTATCGTTGTGATTTT GTTTCTTGCAGGGTTTGGGGTCTCCCTGACGTACTCCCCAAGTCTGGCAA TGGTCGGAAAGTACTTCCACAAGCGGCACGCCACAGCCAACGGGATCGCG ATCAGCGGAACCGGAGTCAGTATGTTTATCCTCTCACCGCTCTTCCAGTT CCTCATCGACGAATTCGGGTGGAATGGCGCACTCCTGATTTTCGCCGCCA TCGCACTAAACGGCTGCGTCTGTGGTGCCTTGCTGAGACCCCTACATCTT AAAGACGCTGGCAAAGACGAAGAAGCCGAAAATGAAGACGAGGAGGATGC AGATTCGTCGAAGACGTGCAAAGCCATCGTTCCATTCTGTCAAAAAGTTT TGAAGATGTTTGACATGACTCTATTGAAAAGCCCACCCTTCCTTGTTTAC AGCTTGTCCCTTTTCGGATTAACGTTGGGCAATTCGATTATTTTTGTGCA CCTGGTAGCCCACGCCCAAGGTCTAGGGGTGGAGAAAACGCAAGCCGCGT TCCTACCGTCCATTCTCGGCATCATCGAAGCTGTCGCACGACCAATAAAC GGCTGGCTGTCAGACAGACTACCAGTCAGAAAACTATACTTCTACATGGT GGGTTGTGTCGGTTTGGGAATATGCAATATCGCGATACCACACGCGCAGA CATACGCGGCCCTCGTGGCGTGCATGGTGTTCTATGGGATCTCGTCTGGT ATCTTCTACCCGTTGATTGCGGTCCTCGTGAGGAAATATAGCGGCGTTTC CAGGATTTCCGGTGGGCTTGGGTGGGCGTTCGTCTTTCAAGGTGCAGCAT ATCTCCTTGGACAACCCATAGCAGGTAATTATCGCCCAAAGTAACTAAAA TGGCAGCTGAATCTGAAACAGAATCATCTTCAACTAGCTTAACCTGACAA TAAGTTCAATATTCTTAGTACGCATGCGCATCGGTAAAATGCATGGTGGG TAACATGGCAAAGGTGAAGTCCCTTAACTTGTAGCAGTGATTAGCAAAAC AATGTCCAGGAATGTTTTTGATGTCGCAGGGGCCTTTCATCTTTGACTTA TTACCCAGAATGCATTTCGCTACACATGCGCACTAAGCATCACGAACCTC CTTATTTTCACACAATCTCCACCTACAGGCTGGCTGTACGACGCAACCGG AAACTACGACATGTCCTTCTATGTAGCTGCAACCTTCGTCTTCGTCTCCG TTGTAATTCTACTCCCCCTTGTCCCGAAGAAAGGGAAAAGCTGGACGCTG GATACTGACAAGCCTGTCCTTGACGTCCCAAGTGACGTGTGTGAAGGAGT GGTGGGACTTCA

Coding sequence (CDS) from alignment at Sc0000026:2031109..2035520+

>Blg00155.0 ID=Blg00155.0|Name=Blg00155.0|organism=Branchiostoma lanceolatum|type=CDS|length=1176bp|location=Sequence derived from alignment at Sc0000026:2031109..2035520+ (Branchiostoma lanceolatum)
ATGCAGTCATTGGATAAACCGCCAGATGGCGGTTGGGGGTGGATGGTGGT
GTTGAGCACGTTTCTCATACACGTCGTCGATGTAGGATCTTACAGGTCCA
TGGGAGTATTCTACGTGGAGTTCCGAGAGGTTTTCCAAGAAAGCGCGGGA
AACACGTCCTTTATCAGTTCTGTCTTCATAGGTACCATATTGATGTGCTC
TCCCATCGCCAGTGCCCTGACCAACTTGACCAGCTGTCGTACCGTCGTCA
TGGCAGGGGGCGTCATTTCCGCCGTGGGACTCGGCCTCAGCTACTTCGCA
CAGAACGTTGTACACCTGATCATAACTATTGGACTGATAACAGGGTTTGG
GGTCTCCCTGACGTACTCCCCAAGTCTGGCAATGGTCGGAAAGTACTTCC
ACAAGCGGCACGCCACAGCCAACGGGATCGCGATCAGCGGAACCGGAGTC
AGTATGTTTATCCTCTCACCGCTCTTCCAGTTCCTCATCGACGAATTCGG
GTGGAATGGCGCACTCCTGATTTTCGCCGCCATCGCACTAAACGGCTGCG
TCTGTGGTGCCTTGCTGAGACCCCTACATCTTAAAGACGCTGGCAAAGAC
GAAGAAGCCGAAAATGAAGACGAGGAGGATGCAGATTCGTCGAAGACGTG
CAAAGCCATCGTTCCATTCTGTCAAAAAGTTTTGAAGATGTTTGACATGA
CTCTATTGAAAAGCCCACCCTTCCTTGTTTACAGCTTGTCCCTTTTCGGA
TTAACGTTGGGCAATTCGATTATTTTTGTGCACCTGGTAGCCCACGCCCA
AGGTCTAGGGGTGGAGAAAACGCAAGCCGCGTTCCTACCGTCCATTCTCG
GCATCATCGAAGCTGTCGCACGACCAATAAACGGCTGGCTGTCAGACAGA
CTACCAGTCAGAAAACTATACTTCTACATGGTGGGTTGTGTCGGTTTGGG
AATATGCAATATCGCGATACCACACGCGCAGACATACGCGGCCCTCGTGG
CGTGCATGGTGTTCTATGGGATCTCGTCTGGTATCTTCTACCCGTTGATT
GCGGTCCTCGTGAGGAAATATAGCGGCGTTTCCAGGATTTCCGGTGGGCT
TGGGTGGGCGTTCGTCTTTCAAGGTGCAGCATATCTCCTTGGACAACCCA
TAGCAGGTAATTATCGCCCAAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00155.0Blg00155.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00155.0-exon-Sc0000026-1570713199:2031109..2031227Blg00155.0-exon-Sc0000026-1570713199:2031109..2031227Branchiostoma lanceolatumexon
Blg00155.0-exon-Sc0000026-1570713199:2032596..2032828Blg00155.0-exon-Sc0000026-1570713199:2032596..2032828Branchiostoma lanceolatumexon
Blg00155.0-exon-Sc0000026-1570713199:2033453..2033596Blg00155.0-exon-Sc0000026-1570713199:2033453..2033596Branchiostoma lanceolatumexon
Blg00155.0-exon-Sc0000026-1570713199:2034220..2035520Blg00155.0-exon-Sc0000026-1570713199:2034220..2035520Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2031109..2035520 +
Properties
Property NameValue
GeneIDBlg00155