Blg00154.0 (mRNA) - B. lanceolatum

Overview
NameBlg00154.0
Unique NameBlg00154.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2718861..2726017+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00154.0 ID=Blg00154.0|Name=Blg00154.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7157bp|location=Sequence derived from alignment at Sc0000026:2718861..2726017+ (Branchiostoma lanceolatum)
CCCAAAATGGTACATTTGATATTTCTTTTACACAGCCAGTTTTAAGTATT AAGAATACCTCCGATGTGTTTACGCACGATTTGGCGAGCTTCAGACAATT GAGTGATTTACTTAGTACATATTCAACGGTGTTTACCACCAGCTCTGTAC AAAACATCAACTTGCCTCACTTTGTTCAGTTAAAAAGACGAAATATGACA CCGAATTTCCTCGTTCTTTCCTTTCAAGCTATTGGCCAGGTTCACCCGTC TGAACAAAGAAACTGGTGTTTACCAGTTGCTGCCATGTTGACGTTGTGAT GTGAGGTGCTCAGTAGCATTGTTGAGAATTGACACCTTATACCTGTACTC CCCAACCAGTCAATGTTACTGTGCTTTGCGACGGCAGCGACGCTGATCAT GTTACATCTCCAACCAATGAAGTTCGCAAGATGAAATAACATTACTATGA ACTGTTCCCTTTTACTTACTAGGAAACATTGCTATTGCGACTGTTGCAGA CGGTGATGCTTTTGGGTAGCAGAAAGTGACTTTATCGATCTGTAATCTCT TTAGTAGTCTATTCTTGCTACAAACTGGCCATGAGCTCGGAGAAGGTTGC GTACGGAGTCGAGGTTCCCGCCCGCGCCCGCCGAGACCGACCCGGCGGGG TCCGACCAGTGACGGTGGCCGTGGCAGCCGGGGCGGGGGTGCTGGTAGTG GCGGCCCTCGTCTTTCTCGCTCACGAGGTCAAGCATGTCCGAGAGAAGTC CACTCAAGAAGTGTCTCAACTGAAAGACCAACTGCGAGATCAATTGGCGA AGGCAAATGACCAACTCTCGACGCTGAAGGATCGTACCTTGGCCATGGAG ATCAAGCAAGACGCCGATGGTAGAGACAACGAGGAAGCGTCCTCTCACAA GGAGGAAATGACGGCCATGAAAATCCAACTGTCGTCCCTGCAGACCCAAC TTGACAGCGAACGTGCGGAAGTGTCGTCCCTGAAGACAGAGTTGCAGAAG GAGAAAGCTGACGGGGCGTCTTTGAGGGAGCGGCTGGCTGTGCTGGAAAC CAAGTTCCAACTCGGGCATGCCGAGGAACAACAGTTTGGAAACATTCGAG AGGTAAGTTTTTGCCAGTAACTTGCTGCAACAAGGAAATAAAATCTCATC GTGCGTGGCTCTAAGTTCAATGAAGCGTAAATAGGTTCCTTTCTTTAAGT TAACAATTGCTTCTTAGCCTTAAAATCTTGGCATTGGGTCTTTAGTTAGA AGGAAGTAGAATTTGACATTTTGTTCCATTCTTGTTCAAAATACTCTCAA CATACAGTAATGTACGTAACCAAGCTTTGAGCAAAATATCTAGGCTAATG GTTTCTTTTTTTATTGCTTTGTTGGGATATTATGGCAATTAAGATGATGA TCATTAACTCCAGGTGTTTACAAGAGCCAATATGAACAGCTAGTTAAAAA GTCTGAACCAACTTTACCCTATTTCTTAAGGACGGGAAGCCGAACCAAGC TGTCAGTGTCTCTGGACACAACGCCACCTTGCGGAGATACAGGCGATCGC CCACTGACTCCGTCACGTCACCTGGCGGTATGTAGGATATTACACTTTTG TTTGGACTTGATTTGAATACACGTAAGATGTATCGAGAAGTATGCCTGTT GATTTAATTACCTTCGCCAAGAAAGCTATGTTTTGCCCAGCGTGCGCTTG TCTGTATATGAACAATCGAGAATGCCTTGGTGGATTATTTGGTATGTCGA TGGTCTTTATTAAACCTCGAAGTAATTAGATTTTGGACCCCCTTATAAAT GATCAGGATAGTTTATAGATCCGCTATATTGCATGATAAAACTCTTTATC AAGTTTCGGTTACACACTGGAGCAAATATTCCAATGCTGGCAGGGCCTGT CCTGATGAGCCCTACATCTTGTGGTCAAAACACAAAGGGATAGCTAGAAC CTGTGTACAACTTGTTTTTGATGTGTGACTAGCTTAAGTGATGCTTGATA TAGTGAATTAGTAATTATGCAAATCAGTATCTAATTTGCATGATTAATTG AGAAATTTTATAAAGCCACCGCATTCCATGACAGGACTATTAAAGAATGT AACATATGTACTTGAGAAATAGAGGGACGTCGAATGATAAAAGTTGTGCA AATAAAGACCGAATTTGCATAATTATTGCCACGGGAAAATACTGTAATTC CATATTGGTATTATCACTGCATGGAAACAAAGATTTCCACAAGTTTGCAC GCTTGGGCACTATGGTGAAACCCCACATTTCCTTGCTGTGTACTCGGCTT TCCTACCCCCCGTGTCACCAAGATTGGACACATGTGCACACAAAAGTCAA TCTATCATGAACTTTACGAACAGTGATTCCGTGTGCTTTCGGTATGACGA GGTGGTATAAGGGAGGGGGCTGGGAGGGGGCAGGCGGGTGCCCGGAGGGG GGGGGGGGGGGTTTCGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNCCGGGGGGGGGGGGGGGCGGATTTCGG GGGCGTAGTAGCATAGCAACGACACTACTTTCAATGACAAAAGGTATTTT GAAGGAGTACCCGGATGTGTCTGGACGGCCCGCGCGGTTAGACCAACAGG AAAAGATAATTAGGTGATAATTACGCGATAATTACTGCTGAATTATGCAC CACTCGTTCGCAAACAAAGGCCGACACATGTAGTTTCCACACATGTCCAC ACGTTTACACACTTGTGCGCACAGGTTTACATCGAAGGACACAAAGTGTA CACGACAGTGGTCCGTTTACCCAGATGTGCATATAGGTTCCCAAAAAGGG ACACATCGCGTTTCCACTGTGGGAACTCATTGAAACCCGTGGAAATTAGG GATTTCCTAGCAGGTATACACAGGTTTTCAAAGCGGAAATCTGTCTGTTC AAGCAGTGTATATAACTGGAATTTCAAACTTCTGTGTCTTATTTGGGCAA AGAAGATGATCAACTTATGTAATTTACGAAAAAGATAATTTTATTTGCAT GATTTAAGAGAAACATGATATATCAGTCGAAAAGGTTAAAATCATTTGGC AAAGGTAAGAAGTCGTGGAACTCTAGTTTTGTATTATGGTGGTATTTCTT TTTTCTTATATCCATACTTTCCACATCGTCAATTTGTCAAGTTGGCGCTA TATCACATATACTTTGGGTCAAATTCACTTGGCAACAGAATTTTGGCCGA TATTTCTTCTTATGTTACATCTTATACCGCCGTGTTTGAGTCTTTGTATT TTGCTATTTTAATGAAACGGGGCGATTTGAATAACAGCATCACCATATTT CTTTCGAGCTAGCACTGATATAAAATCTCACTCTCACTGCAACTGTCGCA GGTCCCATTCGGGGTCCTGAAGACCCGGCCGGACGAGACGGGCGGGACGG CCGTGATGGTGTTCCCGGACCCCCCGGGACCCCCGGGATCCCCGGGCCTC CTGGTGGATGTGGAGGGTGTGGGGAGTCATCTTGCCCCAAGGTAACTTTA GGGCATTCGTGTGCTTACAGATGCATTTTCTGTTAGTTAGTTAGTTAGAA TCCTCCCACACCATAAGGTGTATAGGGCGGGGCCCATCCCCGTTTCATAG CCCTGGGCCACACTGTGGTGCAATCACTGCAGCAGGGGGCTAGTCCACTG GCAGTGGAGTGTGTTTAACTTCCATACTGTTTCATAAGTATGTACCATTT TTATAAAGTCTTTGGTATGACTGAATGCGCCTCTTGACCAGAGGTGTCCT GCCCGGGAGTTGAACAAGGGCCTTCTGGTTCCAAGTAATCAGAACCAGAT GTGGTAAGTAGCAGAAGCGCAGACCACTACACCACTGTACTTATCATTAT TTGATAAATATGAACTGGAGCTCGAGGCGAACTTTTTTTAGGCTAAGCCG ATGATTTACATCGAGCTACGCGTAACTTTGGACGACTTCATACTGTACCC TTGACAATAGGTAAATACGTATATATATATACGATGAAATTTACCATCAA TGATTATTCACATCGTATAGCGGCTGTGTACTGCAGTACCGCTAGGCATG GAGAGCGGAGCTATTCCGGATAGCCACATCACGGCGTCAACTACGCACCC GCATTGTGCCACCAACAAAGCCCGGCTTCATTCCCCGGAAGAGAGTCAAA CAAGCCAGGGAGGATTCGCCGGAGCCTGGTGCGCCAACCACCCGCTGAAC ACCAACCAGTGGCTACATGTGAGGGGAAACTGCACGGTGTAACTTGCTTT ATTGCCAATCCTATGTTATTCTAGGGTCACATTTCCTAACCGGGGCCCGG CCGGGCTGTTTGCGGAAACGAAAAATCAAAGTGTGTGTCAATAGATTTGC ACAAGCTATGCTCTTAAATAATTTGGGTACACTTTTTGCTTTTGTCGTCT TTTATATCATACTTTTAGTCCCCAAAGACCGGGCCCGGATTGGAAATGTG ACCCTAGCATAATTGTGCCCTAGGTAGTATAACTCATATGCCGCATCTGT TGTTAGATTGCGTGTTTCTTTTCATTGATATGAAACCTTTTTTTCTTCCT CTGGCATTCATATTTTCATCAAGCCGACGTTGATTGTATGAGCTTAGAAG ACAACTGTCGACAACATGTCTACACGTATTTGACATTAATCCGCCGGATT ACATAAATCCGCCACTTTGAAAAACAGTGGGTTTGAGAGATCTCTAGTGC AGCACCCCCCAGGTATGCACAGTTTAGATATACAGGAGTGGGGGTTGACG TTGGGTTGGAAGCTAAAGATCTGTTTGGACGTATCTTTTAAGGTTGGCGG AGTTATATACCCCAGAATTATGTTTAACTTAGTAACCAGTCACATTTATT ACATGGAACCTGGTAACATATTGAGTGAAGAACTTGACGCCAGATTGAAC AGGTACACTGACAATCGTACCAAGGGGTAGTGTGGCGTAACGGCAGAGTG TTCGACTCAGAGCCAATAGGGCCCGAGTTCGAATCCCCCCGACGCCACCG ATGCTGTGCCCTTGGGAAATGCACTTAACACGACTTTCCTCACTTTGCCC AGGTGTATACAAATGAAAAATGGGTATATTGTTATTTGAACGTGGCACTA TTATTATAAGTTATAAAACGTTGAGTGCAGTGCCAAGTCCTTGTCTGTCA AAAACCGAATTTAAAAAAAATCGTACCAAGATACCGTGTTCCTCCTGGTC AGGTTGACGTGGGAGCAGAGATTACTGTAGCTGGAGTCATCACCCAGGGC AGGCCAGCAGCAAATCAGTGGGTGAAATCCTACAAACTACGCTTCAGCAC AGACGGGACAACGTGGTCCACATACTTGGACAAGTTCGGGCGGGAGAAGG TTGGTAAACCTTGTCTTCTGCACTAGTCTAAACTTTTCAGAAACAATATA CTTTTCCCTCGTACTTGTATGATCATTTCTCGTATTTGTGGCGAAAGTGG TAGAGCGCGCGGCTGTCAAACAATGGGACCTGGGATCTAATCTCGCCAAG AAACTTGTCCGAACTTGCGCCCCGACGTTGTGCTCTTGGGAAAGGCATGA TTTTCCTCACTTCACTCAGGTATAAATGAGTACCTAGCTCATCTAGGGTT AGGTCCCTCGGATAGGGCGTTAGATGGAGGTCCCGTGTTTGGGAAGAGCC ACACCCCGCGCACGTTAAAAACCCACCACACCTTTCGAAAAAGAGTATCG GCATGCCCCGGTGTGCATGCGATGGACCAAATCTTACAGTCAAGTTGACA TCTTGAAAAGGTGATAGTCACCTGTTATGTTGATCCTTCCACAAGTCTGG TAAATCTGAATAAAAATAAAATTTACGTGTGGTGTTGCGAGTTACTTGAT CATTCACTCATTCTCATTCACAATACCATCCTAGGTCCTCTCTGGCAACT CTGATCAGAACACCGAAGTGCGCCACCTGTTGGACCCGCCGGTAACTGCA CGTTACGTCCGGTTCTGGCCGCTGACATGGAATAATCACCTCAGCATGCG TGTGGAGGTCTTGGGACAGTAAGTACACAGCTGAAGTCTTCGATCTGTTC TCTGTGAATTTTCACAAGGGGATTTTGAAATACTAGTAAGTGATGTAATG TCCCAGTAAAGGCATTGTTAAATATGTTTCCGTTGACATTGCACAACGAC AAAGTGTTTTTGGCTTAAGTGATAATTTACATAATCTTATGCCGATTATG CAAATCCGGCGCTAGGTTGCATAGTTAATGAGGAAAGTTTATTAAACCAC GGCTTTCCATAATAGGACCCTAAAACACAACATAAGTAATGAGAAAGAGA TGAATATCGATGATATCAATCATGCATATGAATACCATATTTGCATGAAT AATGACAAAATGCTATTATTTCATCGGCGTTAATGTCGGGGATTTCATTC TTGCAGCATTTAGAAGTTAAGTACACAAAAAACTAACAAAGACCGCCGTC GCCATGACTACGTCTTTTTTGTTGTCCATCTTGTTTTTCTTGTTTCTTCT CTGTAGGGATTGCACCAGTGGCTAGACTCATCATGAAGAATTGGAGCTTT TCTAAGCTCAGATTTGCCCATTACAGGATATCTGCGCTACAGTTTTAAGT CAAACATAAATTTCCTTATTTTAGTTATGATAGTTTACAATTAGAATCCA CACCAAATATATTTCCTTCACTGTTTTATTGTTCTAAACTTTGATATGTC TACACTGAGAATAGACCAGCCCGGCGAGCCCTATGCACGTCGGTAGCCGC CATGCATCAGGCACTGATGCCCTAACGATTGTCATCTCCATGAAAAATGG AGATATAGTTTTGGGTGTGTCTGTCTGTGGGTATGTGTGTGTGTGTGTGT GGTGTAGGTTTGGGCCTCCTTGTTTGATACTGTGTTCATCTACCCAATCA GCTTCCACACTACTTAAGTTTTTATCAAGCTAATCCTAAGCTTGCTGAGT ATCATCATGCACTGAAGTACGTAGATTATCATATTCATAATCAGAAGATT TATATCACAAAATTTTGACTAATAATGCATTATGTATGTACACAAGATGA TACAATCGGTACTTCATTTGTGCAGAATTTAGGGTAAGAAATAAAGCAGA ATTTTTC

Coding sequence (CDS) from alignment at Sc0000026:2718861..2726017+

>Blg00154.0 ID=Blg00154.0|Name=Blg00154.0|organism=Branchiostoma lanceolatum|type=CDS|length=1257bp|location=Sequence derived from alignment at Sc0000026:2718861..2726017+ (Branchiostoma lanceolatum)
ATGAGCTCGGAGAAGGTTGCGTACGGAGTCGAGGTTCCCGCCCGCGCCCG
CCGAGACCGACCCGGCGGGGTCCGACCAGTGACGGTGGCCGTGGCAGCCG
GGGCGGGGGTGCTGGTAGTGGCGGCCCTCGTCTTTCTCGCTCACGAGGTC
AAGCATGTCCGAGAGAAGTCCACTCAAGAAGTGTCTCAACTGAAAGACCA
ACTGCGAGATCAATTGGCGAAGGCAAATGACCAACTCTCGACGCTGAAGG
ATCGTACCTTGGCCATGGAGATCAAGCAAGACGCCGATGGTAGAGACAAC
GAGGAAGCGTCCTCTCACAAGGAGGAAATGACGGCCATGAAAATCCAACT
GTCGTCCCTGCAGACCCAACTTGACAGCGAACGTGCGGAAGTGTCGTCCC
TGAAGACAGAGTTGCAGAAGGAGAAAGCTGACGGGGCGTCTTTGAGGGAG
CGGCTGGCTGTGCTGGAAACCAAGTTCCAACTCGGGCATGCCGAGGAACA
ACAGTTTGGAAACATTCGAGAGGACGGGAAGCCGAACCAAGCTGTCAGTG
TCTCTGGACACAACGCCACCTTGCGGAGATACAGGCGATCGCCCACTGAC
TCCGTCACGTCACCTGGCGGTCCCATTCGGGGTCCTGAAGACCCGGCCGG
ACGAGACGGGCGGGACGGCCGTGATGGTGTTCCCGGACCCCCCGGGACCC
CCGGGATCCCCGGGCCTCCTGGTGGATGTGGAGGGTGTGGGGAGTCATCT
TGCCCCAAGCGGCTGTGTACTGCAGTACCGCTAGGCATGGAGAGCGGAGC
TATTCCGGATAGCCACATCACGGCGTCAACTACGCACCCGCATTGTGCCA
CCAACAAAGCCCGGCTTCATTCCCCGGAAGAGAGTCAAACAAGCCAGGGA
GGATTCGCCGGAGCCTGGTGCGCCAACCACCCGCTGAACACCAACCAGTG
GCTACATGTTGACGTGGGAGCAGAGATTACTGTAGCTGGAGTCATCACCC
AGGGCAGGCCAGCAGCAAATCAGTGGGTGAAATCCTACAAACTACGCTTC
AGCACAGACGGGACAACGTGGTCCACATACTTGGACAAGTTCGGGCGGGA
GAAGGTCCTCTCTGGCAACTCTGATCAGAACACCGAAGTGCGCCACCTGT
TGGACCCGCCGGTAACTGCACGTTACGTCCGGTTCTGGCCGCTGACATGG
AATAATCACCTCAGCATGCGTGTGGAGGTCTTGGGACAGGATTGCACCAG
TGGCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00154.0-exon-Sc0000026-1570713199:2718861..2719962Blg00154.0-exon-Sc0000026-1570713199:2718861..2719962Branchiostoma lanceolatumexon
Blg00154.0-exon-Sc0000026-1570713199:2720341..2720437Blg00154.0-exon-Sc0000026-1570713199:2720341..2720437Branchiostoma lanceolatumexon
Blg00154.0-exon-Sc0000026-1570713199:2722262..2722401Blg00154.0-exon-Sc0000026-1570713199:2722262..2722401Branchiostoma lanceolatumexon
Blg00154.0-exon-Sc0000026-1570713199:2722931..2723128Blg00154.0-exon-Sc0000026-1570713199:2722931..2723128Branchiostoma lanceolatumexon
Blg00154.0-exon-Sc0000026-1570713199:2724113..2724259Blg00154.0-exon-Sc0000026-1570713199:2724113..2724259Branchiostoma lanceolatumexon
Blg00154.0-exon-Sc0000026-1570713199:2724795..2724928Blg00154.0-exon-Sc0000026-1570713199:2724795..2724928Branchiostoma lanceolatumexon
Blg00154.0-exon-Sc0000026-1570713199:2725417..2726017Blg00154.0-exon-Sc0000026-1570713199:2725417..2726017Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00154.0Blg00154.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2718861..2726017 +
Properties
Property NameValue
GeneIDBlg00154