Blg00150.2 (mRNA) - B. lanceolatum

Overview
NameBlg00150.2
Unique NameBlg00150.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1949108..1957874-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00150.2 ID=Blg00150.2|Name=Blg00150.2|organism=Branchiostoma lanceolatum|type=mRNA|length=8767bp|location=Sequence derived from alignment at Sc0000026:1949108..1957874- (Branchiostoma lanceolatum)
CAAAAACCTGTTCTGGTTCGAAGACAACATGGATGTCTTCTTCTACAGTA TCCTCCTGGTTCTGACGGTAAGTTTTTACTTATATGTATGTATAATAGCC GCGGAGACATTCCACGCTACAAATACACGACACGAAATGATATAGGGTTG CAAGAGTTATTGATTGAGGGCATTGTTGTGACAGTCGTGCATTAAGTGTT GTTGTTAAAAAATGACGAATAAGAAAGTCATCGAGCCTTGGCAAAGTTTG TTTCTGACGTACTAGTAACCTTTGTTAAAATCTTATTTCCAATAACAAAC CAAACAAGCAAGGAAACAGAAACAAAACAAACGATTGACACTTGTTGGGG GGCCTTTATAGCCTCCGTAGAGTCCCCCTCCTGTAGTTATATGAATACTG CGCCTACTTGTAATTGGGACTATAATATGTAAAATGGGGCCTGCAACGGA GGCCTTTTGCCACTCAGATAGTCTTTTAACCGTGCTGAAATTATAATATG TTTACCGGTTTTGTAAGTATTGAAACTGCATCTATCGCTCAAAATTTCCA TGCTGTTTACAAATAAAAAAGACAGGCAAACACATAGACGCACAGGCAGC TTTATTACACAGTTCCGAAAACAGACCCTCGAGATAATGGCCGATGCGGA AAAACCAGTCGGTCGACTTGATTTCGTAGCATGAAAGGAGCACGCAGGTA TAATCTTCAAGCAGATACAGGGAGGTAAAAACAATGCCTCCTCTGTCGAA CTTACACGTTGCCCATTGCGAATAAAGGTTTAACATAAAACCATACCAAG TCAACAAAGGAAGTGGCGCTTGCAACAACAGTCCAATGAACAAAAGAAAA GCAGGGCGACTTACGTGAAATCTTCCACCAAACATAAAAAACAACAGTTC GGAAACCTCAAATCTTCATCAAATATTCCAATTATGCATTTGACTTCGAC ATTTTAATAATATATGCTTGGCCACGTACACATTTAACTAACGTTATTAC ACATGTTGTAATATTCAAAGTCCAAACTTTTACCACTTAGATGAAATATG GAGCTTTTGCATTAATGATGCAAAGTAGAAATTTATTTGCATAACTGGTA TGTGTTCATGTTCCACGTGCCAGAGACTACATAACTTATGTCACATGTAT TTGATTCCTGTAATGGGAAGCACCGCAACTATAGATTTCCCTCAATAACT ATGCAAATTAAGTCCATGGATAAACCATGGATGACATCCAGAATAAAACG ACTTATGGGTATTCGTGACAAAATACATAAAAAAAGCTAAATTATCTAAT ACCCCTACACTCTGGGCTTCTTATCGCAAGATAAGGAAAAAACTTGTGAA TGAATTAGCTTCAACCAAATCGAACAATGATACAAAATTCTCTACTAAAC TCTACAACATGGTGACATATAGTCAAAACCATTTATGGATGCAAAACGAC AACTACCATTCCTCCACTTAAGTGCAATAACCATTATATATGTGACTCAA GCGAAAAGGCTTCAGAATTCAACAATTATTTTTCCCTCCAATCGATGATA CTAATTCCACATTATCAAATCTTGACTATCTGACCAATGCACGTTTGTTC GACTGTGAAACCACTGCCCCTGAAGTTGAACTATATATCTCCGAGCTAGA TATTTCTAAAGCATACGGGTGGGATAACATTGACAACCGTTTTCTTAAAA TCATTAGTCCTTACATTTCAGATAAAATAGCCTATGGTTTTAATCTTTCG CTCTGTCATGGAATATTCCCAGAAGTCTGGAAGAAAGCAAATGTTGTACC TATCTTTAAGAAAGGTGATCATTGTATAGTTCCCAACTACCGTCCCGTCT CGTTGTTGCCTACCCTATCTAAAATTCTTGAATAAATTGTCTACAAACAT TTATACAACCACTTAATGTCTCGAAATCTGTTATATTCTTACCAATCTGG TTTCATTAGGGGAGATTCAACTGTAAACCAGCTTGTCTTCATTACAAACA AAATTCACCAAGCCTTTGACCAGAACAAAGAAGTCAGAGCCGTTTATCTT GATTTTTCAAAAGCTTTTGATAAGGTTTGGCATAAAGGCATTATCTTCAA GCTTCAACGAAACGGGGTGGAAGGACCATTTCTCAACTGGTTTCAGAGTT ACCTCAATGGTAGAAAGCAGCGTGTTGTAATTGAAGGTCAAAAATCTGAT TGGCGCGAGGTAAGTGCAGGTGTACCTCAAGGATTAGTGCTTGGTCCACT ATCATTCCTCGTGTACATTAATGACATGATACAGGAACTCGAAACTCATC CTTTTCTGTTCGCAGACGATAGTTCCTTGCTCGATGTTGTAGAACCCCCC CACCGTATCAGTCATTAGACTCAATTCTGACCTTTCTAAGATACTCTCAT GGACAAATGCGTGGCTAATGAAACTCAATCCGTCAAAAACAATTGAAACG TGTTATTCTCAAAGGCTACCCCTCCTCCACATCCACTCCTTTTCCTTGAT AACGAACAAATCAAATCTGTAGACTCTCACAAACACATCGGGGTCCATCT GTCATCTACTATGTCTTGGAATGCACATATTTCTAACATGTTAGCCAATG CATCTAAAAACGTTTCAACCTTCAGTAAACTTAAATTCAAGCTCCCCCGT GAAGTTTTGGAAACAATATACAAATCTTTTATCCGTCCCCTTCTCGAGTA TGGTGGCATAGTATGGCACGGTTGCACTGCTTTATACTCTCAACTCATCG AACGAATACAATATGAATGTGCTTTAACCGTAGCTGGTGCCATTAGGGGG TCCTCGTATACTTCACTACTCGCCGAACTGGGATAGGAAAAGTTATCTGA CCGCCGCCATGTTCAGTCTCTTATTTTATTCTATAAAATTATCCATGGAC AAACTCGACAATACTTAAGAGATTTGATACCACCCACAGTATCAGATTCC TCTTCCTACGACCTTCGCAATAAATATAACCTTCAGTTGTTAAAGTGTAC CACAACTCGCTTTAAGAAATCATTCATACCTTATGCTACCTATCATTGGA AGAACCTTACCTTGGCAGATCGATCATTAAGTCTTCCACATTTTAAGAAA ACAATGATCAATGTGCGCCCTGTATCCGTCCCATATTTCAACACTGGTCC TCGTTACACCTGCGCTCTTCTCACTCGTTTCCGTCTCGTACTTTCAGTTT AAACTTCAATCTGTACACTGGCAACCTAGTTACCAGTCCTGCTTGTACCT GTGTCCATCCTTGTGAAAGTATTTCTCATTATTTCTTGTACTGCCCAAAC TACACTCAATACCGTTCCTTACTCTTCAGCAATCGGGTAGGATCAGTTAC AAATCTCAATGATCTCTCGGATAATGTCCTAATTCAATTCTTGCTTAAAG GCTCACCCTTCCTTTCGAATTCAAACAATGCCAAACTCTTACAGCATGTC CAACTATTCATTAAAGAAACCAAAAGATTTGAGTATTCAACCCCCCATCC TACCAGTCTTGTAGTACCTGCCCACATTTTTATCTGTTTAATGATTTCAA TTTTGTTTCATTTCAAGATTTCTGTCATGTAGTTTATTTGGGATTATTTA TTACTCTTATGCTTTGCATATCCGCACCTGTTTTTTTCATTATCAGTATT TGTAATATTTGTTCTGTACTTCTGTACTGTATTCTGTCGATGACGACACG AAAATAAGCTGTAAGCTCGAGTCTGTCGTCATCATGTCATGTATTTAAAT GTTGCAATAAAAAAAAAATTAAGTCCCGATTCGCATAATTTGCACTTCAT TATTTACATATCAGTTTCAGCTACCTCCATGCTGAGTATCATGTAAACCC GTCGTTCTTTTCTTCAATTATTCTCCTTTGAAGATTTTGACAAAAACGCC CCCGCAGTTCCAGAGCAAGGTGCTAGGAGACCCAAACCCACACCGCTTCT TCTTCACTTGGCAAGCTACCTACCACTAAAACTTCTGCTGCAGTACCAAG TACATTTCAGGGGTCCATAAATTGACCTTTAACTTCTTCTTTCCAACATC TACCCTTATACCAAATTTCATCATAACCCATTAAGAGGGTCTTGAGTTAT AACCAAGGAACAAAAACAGACACACACACAAACACACACAGATACACAAA ACTGTAGCTCCATTTTTCCACAGAGATAGCATGGATAAAAAGGTTTCCAA TGCTTTAACTGCCTTGAGATGGGTGTAGTCGACACTACCGAGTAGTATGT GCTGCCATGTTAATTTGATTATACGGATAGCATCCCCTGGGAACCCCAAA ACAGATGCGAACGTGCGAATAAAAAAAATAATGGCAGAAAAAGTTGTCTT CATTATAATATCTACGTGGTTAGGACAATGCAAGAAGGACGAACAAACTC AACACACAGAGTATGGTATACCGAAATATAGGTTCTTCATTTTTTTTCTT TCAAAATTTTTGACTTTGGAACTGACTTTGGCATTCTGCGACATTAGTAT CCGTTTTCCTAAATATATTTTTTTTTTGCAATTTACAGCAAGTATTTTAT TTTGCAGCTGATTTTTACGATTTACCGTATTGCCTAAAACCTTTTTTTTT TCAATTTGGAAAGTGACAAATTGATGCGCGTGCGAAAGTCATTCATATGA TCAAATCAACATGGCCTGACGTCAAACAATAGTTCTGACAAGCTTTTTCG ATTACACTTTTAAAAACAGCCTAGGTGAAGTGAGCGAAATGACACTCATC CAGTCATATTTTCAATTTAATTAGTGGCATATAATGGACTCTGCGATAGC GTTAATCATCATCGGTCAGTCGCGCAGCGGCCGGTCACACGTCCTCTCCA CATCCGCCGGTCCGTAGCCTTTGCAGTGATGGCCTCGGGGCTCAGGTCAC CTTCAGCATCGTCTTCTGCAATGTGTCGGTATGTCCTAAGAGGCTCCTCT GCTCCACTGGGCTTTATAGGGCGTGCCCAATAAAGCCCAGTTGTCGCTGT CTGACTCTGTTGATGAGATGCTGGGTGCGATGTATGTTATGCTACTGAGG GTTACGCGGTTGGCATAGGGATGAGGCACCACCATGACCCACCACCAGAA TTTGATACATAGCACGGCGATGTCATGCGCACTGCACCTCCTGGGTTATA GCTATCATACTGTCGCCAACATAATATTGACCCGTACAACACAGACATTT GCAGTGCTAGTGGTTCCCTGCTATCTCCAAGCAGATGCCCCCTCCCCCTT TTCGTGACATATTTTAGAACAATCGCTTGTCAGTGAAACCATATTGGTTA GAAAATGTTGCGGTATTTCATTCTTCTACGTTTAGACTTATTTTCCTTTT TATACGACTTGGAAACTTGTGTATGCTGTGGGTAAATTTACAGGTCTCGT TGTACAGCCGAGGTCGATTGGTATTGAAGTTGCTTCATACATGTTTTTAA AAAGTGATATTTTTCTTGTTGACATTCATTTGACCATTGGGTTTCTGTGC AGGTCTTCTTGCGAGAGGGCTGCCATGCAGCGTTGCTAGGCAACCCGCAG GTGATTGACATGACGTACACCTTCGATGACACCACTGTGAACTGGCCAGC ACTTCGACCTTTCCGCCTTAAAGATATATTCAGAGGCTACCACCAAAATG GCTACTATTACGAAGGCAGTTCCTATGAGGGATATGAACATAGTGGTACC CATGTGGACGCCCCTTCGCACTTCTGCAAGGACAAGTGGCGAAGTGAGTA GATCAAACTTACAGATCGTTTTCAAGTGACGTCAGCACTGGGCCCATCAC CATCTTGGTGTCCCTAGTTTGCATATTAATGATCATTAATGAATCATAGC ATTTGACCTCTGATACCCGGAAATAACCAGTGTCAAATGTGTACAGCTCA AATAAGAGACTACCCGAAAGGTACTAAAAATAAAACACAAAAATCATGTG TATGTTTGAGCCACCATCTATTGGAATACAGATGAGGACACCAGCATGGC AGTCAGCACCTGTCTCCTTAATTGATATGGAAAGTCGTGATAGATATAGC TCTAGATATATATCTGCAGTTAATATGTAGATTCACTGGTTGGATTTAGG GAGGAACCGCCAAATCTGACCTGCGCAGACGGTGCATTTTGCATACCCTG GTCTTATTTTTTCTCATGAAATATCATTTTTGAGAATTAATTCTTGGGGC CATTCATTGTGGACCAATTTTCCGCCAGAGATACAAGAGGAATGCTAACT TTAAATTCTAGAAAGAAATGTTGAACATATTTGACCTTAGTGGTGTAATC TACATCTTCTGGGGCCTGGTGCCGGCATGGTGATGCAAGCATCCACCAGC TTGGGAGTGAAAGGTCAGTGTTGTTTTGGTTCGAAACCAAGTAGCCGGAG ATTTTGCCGGAGTCGAAGCTCTGCTTTTTCCATATTTGGTAAAAAGACAT GTTTAGGTATCCAGTTAAAAGGAGTTTTGGGACATTGAAATACTGGTATG TGTGTTTTGAAGCCTTTCCTTATGTCTGTTAGCAGTATTTGGCAGCCCCT CCCTATCTACTGCGCTTCGTTTGAATGACTAATATTACTCATATCAACAA AACGATGAATGATACGCAGTATGGCGACCTTAACATCGGGAAAATGTGCT ACTAGATTGACTAATGCTTTATATTATATTAAGGGTATTCTAAGTTAATT TCTTTTGCCATTAATGCAATACATTTAGTAAACCAGTGCTTTTAATCTTA AATCGGTTCCCTTAGCATAATCATTCTGAAGTCCATGTACGGAATGTTAT ATAACATATCATAACTCTAAGTTCGAGAGTGGCCTTGGCTTCGCAAAATG GGCCATATATTAAAAAAATATTTTTTTCACTAGTATATCGAAACTTTAAA GATCATCGCTTGAATAATCTATGGTATCTCATGACTTTCAGTGGACGCTG TTCCACTAGAACGTCTGATGGGTCCGGCTGTGGTTGTGGACGTGACAAAC AAGACAAAGAACAACGCGGACTACACGGTAACGGCTCAAGACTTCCAGGA CTGGGAGGAGAATAATGGCCGGATTCCGGATGGATCTATCGTGCTAGGTG GGTCTTTTCCTTATCGTGCAGTTGGTGTCCCGGCGGAGTCCGGTCAGTGT TTTCAAGATGAGGTTACGGCTTGCATCGGGTATATTCATACGGGGACCTG GGTTTATTGTTAGCCCACCCTCGAGTCCTAAAATAGACCGAAAGCCACTG GGAATTCAATAGACCCACATAAAAGTGTAAAAAAAAAGATAATAAGAAAT CCAGCATATTACCCGAAAGTGTAAAAAAAAGCAAAAAAATGCCAGTAGAC TACCCGTTGAGGCATCGGTTTTGAAATGCATGACGACCGCTGGCCAGCTT CAAAGCCCTTTGACGAACTTCAAAGCCCGACCGGGGCCTAAATCGGGTAC AGCCCAGAAGGGCACCTTGGATATGTGACTAACTGAAGGCAAATGTACGG TAGGTTCTTTAGCGAGCTCAAAGTACACATCTGTAGCTCTCCTCAAACAC GGGAAATCTGGTTGTATGTCCTATATTCGAGAGGGCGTCATTTTCCCTTT ATAATCATTTACTTATATTCACATAGGCGGAGGGAGAAAGAGGTAAAAAG GAAGAATCACAAAATAATATAGTAAAGTTTTGCTTGCATCTTTTTGTCAG TTCGAACGGGCTGGGGCCAGTATTGGTCGGACAAACGCCAGTACCTGGGA ACTGACACATCCGACCCCTCCCTGCTGCACTTCCCTGGATTAGACCCAGA GGGCGCCCGTTGGCTGGTACAAAACAGAGGCATGCATGCTGTTGGAATTG ACACTGGATCTCTCAGCCCGGGACAGTCCACTGTGAGTTCGATGAATTCT AACTTACCTTGGTGTGAACCTTGTTGGATACAAATTAAGTCAACTCAAAA TAAGGTTATATGAGAATGAATTAGTAAAATATAATCAAAAACAAACGCCA TCATCATCACATATTCAGCGATGACTATCATTAGATACAGACCACCCAAA TTGAGATATTGTTTGCATAATCTGTGATTGAAACCTACATATCTACTAAC GCTGTCAGCACAATCAGTCATTTTTACTGTTTTCCGTGGGTCATATGCCT AGAAAAAAACAATCATGGGCGTTGCATGTTCATTTGTGACGTCATTGGTA TGCTATCTTGAAACAATTAACTGAGCCAATTTGACCAATGGTAGAACCAC TTGGTCCAACCAATCAGCTCAAGATTGATATGGCTTATAACAATGATTCA GTTTTTATTTGATGCTTAGACCGTACATTCTAGATCTACTTCAATCAGAG ATTACTAACACGTTTTTTGATTATGCATGTGCCTTTCTAGAATTTCAGCG CACATCAGATATTGTGCGAAGCTGACATCATCGGATTGGAGAGCGTGGCC AACATGGACAAACTTCCGACCACAGGAGCCACTGTGTACGCTCTACCGCT AAAGATCGGGGAAGGGAGCGGGGGCCCGGCCAGAATCATAGGTATCATCA ACAACCATGAGGGCGGGGGTGGTAGAGACGAACTGTAGTAGTCCATCTTT GTAGTTGTAGCAAGATGTTGTATTTTTCATTGATGATGATGATGATTTAT TTCGTCAATGCATCGCAAGCACAGCGATGTATTATATTACGTCCTCTTTA TCACCATGACATGTTAGAGTACACATGTACAATAAAGGTATTTCTTTTAT TTTTAAAAGAGAATGGT

Coding sequence (CDS) from alignment at Sc0000026:1949108..1957874-

>Blg00150.2 ID=Blg00150.2|Name=Blg00150.2|organism=Branchiostoma lanceolatum|type=CDS|length=510bp|location=Sequence derived from alignment at Sc0000026:1949108..1957874- (Branchiostoma lanceolatum)
ATGGGTCCGGCTGTGGTTGTGGACGTGACAAACAAGACAAAGAACAACGC
GGACTACACGGTAACGGCTCAAGACTTCCAGGACTGGGAGGAGAATAATG
GCCGGATTCCGGATGGATCTATCGTGCTAGTTCGAACGGGCTGGGGCCAG
TATTGGTCGGACAAACGCCAGTACCTGGGAACTGACACATCCGACCCCTC
CCTGCTGCACTTCCCTGGATTAGACCCAGAGGGCGCCCGTTGGCTGGTAC
AAAACAGAGGCATGCATGCTGTTGGAATTGACACTGGATCTCTCAGCCCG
GGACAGTCCACTAATTTCAGCGCACATCAGATATTGTGCGAAGCTGACAT
CATCGGATTGGAGAGCGTGGCCAACATGGACAAACTTCCGACCACAGGAG
CCACTGTGTACGCTCTACCGCTAAAGATCGGGGAAGGGAGCGGGGGCCCG
GCCAGAATCATAGGTATCATCAACAACCATGAGGGCGGGGGTGGTAGAGA
CGAACTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00150.2Blg00150.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00150.2-exon-Sc0000026-1570713199:1957808..1957874Blg00150.2-exon-Sc0000026-1570713199:1957808..1957874Branchiostoma lanceolatumexon
Blg00150.2-exon-Sc0000026-1570713199:1952325..1952372Blg00150.2-exon-Sc0000026-1570713199:1952325..1952372Branchiostoma lanceolatumexon
Blg00150.2-exon-Sc0000026-1570713199:1950778..1950933Blg00150.2-exon-Sc0000026-1570713199:1950778..1950933Branchiostoma lanceolatumexon
Blg00150.2-exon-Sc0000026-1570713199:1949993..1950174Blg00150.2-exon-Sc0000026-1570713199:1949993..1950174Branchiostoma lanceolatumexon
Blg00150.2-exon-Sc0000026-1570713199:1949108..1949484Blg00150.2-exon-Sc0000026-1570713199:1949108..1949484Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1949108..1957874 -
Properties
Property NameValue
GeneIDBlg00150