Blg00138.0 (mRNA) - B. lanceolatum

Overview
NameBlg00138.0
Unique NameBlg00138.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1460106..1468011-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00138.0 ID=Blg00138.0|Name=Blg00138.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7906bp|location=Sequence derived from alignment at Sc0000026:1460106..1468011- (Branchiostoma lanceolatum)
CGTCCCTTGCGATGTGACGTCATTGGCATAGTAACATTACCGCTTGGAGG AAGCGCTTAGATCGTGAAAAAAATGGTAAGTTTTCCTGTGTTTTCTCGAA TATTCTGCGATTTTAGGGAGTACACACACGTTTTCGGGACGTAAAATAGG TTTTGAATCATCAGTGCCAGCATGGTAGCTTTCCAAATGGCATAGTTTTG AAAGAAATCGGCTATCACCTGTTATATTTTCGAGGGTTTCTGTCGATAAT TTTCGTGGTGCATGCTTCTGCCTCGCGTTCTCGGCTTTTGCTTGAAAACC GGGGCTTCAAAATCAAAGTAGTTTCTCCCAAGAAGGCAAAGAAGCACCCA AGCTCTGATGCTTGGTCTTAATTTTCTTGGCAAAGCATATCAATAATGAT ATATGATTCATAAACTAACAATCATCTCACTATGATTTGTACTGTATATA GTGTCTCCAAGCAGATGTTGGGTAGAAGATTGTAACGTTTTCTGATTGCC TGGCTTCTATGACACCTGTCAATATAATCAGTGAAGACAAGTGAAGAAAA TTCCACCCAATATCTGCTTGGAGATTGTTCCTTCAAATCATAAATATGTA CACCTCTTAGAGATTACTGTAAATACACTTATTTTTCGCAGGGACTTGAG TTCGCTGTGTACTGTAAGTGGAAATTAGGTTTTCGCTGTGTTTTAACTTC GTAGTTGAAATACGCATTAGAAATGCATATTTATGATTTCACTGATTCCC ATCGGAGATGTGGACCGCAAAAAAACATGAAAAACAGAATTGTAACAGAC GTTTTAAGATTTACACTTTGACACACCAGTATTCCCTGGGGACACAGGTG TAAAATCTCTCTTAGTCAGGTGTCCGTCAGAAAAACCTGTTTGACAGGTA TATAAGGATTTGTTTTTGATCTTGTTTTTGCAGTTACCATGGTTACTGAT TGTTCAGGGAGGCACCGTGTAATTGTCATCCACTTTTGTGCCTTGTTAAA TTCCCCATGACAGCATACATTACTTTTCCTAAGGCTACTTTAATATGCAC TATATGATAATACTATACTAGAGTCTAGAAGTAGATAATTGTTTGAAATG CAATTTACTCCATACACTGCGAAAACCTTTTCCCTCCAAAAGCAAAATAC ATGTATCGTATGTCTCTATGAAAATGAATGAATATTCAGGATTTACTTGG ATTGCCTCTTTGTTTGTATTTGTACTTGTTTCACTAAGCCAAAAAGGATT AGAAGGATTTGTTACTTAATTTGCATCAAAAATGAGTTCTGGACTTTTTG TCTACTGGTGTCATATGATAGGGATGTGTGCTGATACTGTGCATGATGCA TAATACTGTGTACATTGTACATGGTACTGTATTCAGATACAGTACCATGA AAACCTTTTAGGTACAGGTCCAAAATACCGGAACATGAATGTACCATTAC TGTTGTTTTATTTCTAAAAACATGTTATTCCTACCACATAGATACTTATT TAGCACTGAAAACATTGTATGGTCACTGAAATCAGCACCAGTTTGAGATC CTATCAAAAGCATGGGGTCTCTGCATAAGATTCCTGAAGACAAAATTTAA AAAGGAGGTAAAGGTAGTCTCATACTAGTAGTACTAGTAGCCCTTTTGAG GCCAGTGTAACTACTGTAAGGACAGTGGGTTGTTATCGCTGTGTCTAGGG CACGGAAGGTGGAGCCCAACCCTCTCCTTCCACTGCCTTTTTACTACTCA GTACTAGTAGTAATACATGTATTTCCCGAACTGGTATCAAGTACCCATTT TTATACCTGGCTGGAATGTAAAAGTCCTGTTATGATTATAATTTATATGC TTTTCCCAAGAACACAACGTCTAGCCAGGAACACCGGGAATCTTTAATCT GCTTGTCAGCCACTCTACTATTTAGTAATGCCACCACAAGTCTATATAGA TATTCTGTTGTTTGTCTTTTCATTTTTCTGTCATCATTGAAGATTGATGT CTTAAACTACACATCCCTATCACATCGTCAATGTTTTGCCCATGGAAAAG GCACTTTGCAGGAGTCTTTCCTCACCCCACCCAGGTGTAAAAATTGGTAC CTGACTTCAGTTGGGGAGGTGAAAGGAGATCTAGAGGGATGGGCTCCATG GCCACCTTTCAATATAACTTGCTCATGCTCCTATGGCCTCAAAAGGCTAT GGAACTACCTTTGCCTTTACCCTATGGCATAATCACTGAGTGATCTTCTT GTTCCCAGGGACTCCTTGCCCTTCTGCGTAAGCTGAAGAGCAATCCTGAG AAGGAGCTGAAAATCCTTCTCCTCGGACTTGACAATGCCGGCAAGACAAC TCTACTAAAAGCCTTAGCGTCAGAAGACATCTCCCATATCACCCCCACAC AGGTATGTACTACTCTTACACGTACAATGTGTACAAATTTAGGGCAACAA ATTACTGAAAATGTTACTGGCATTGTACAGTACAAACTAGTTACGCTTTG TTGCAAAAAAAAAACGATCAAATGGAAAGGATTATGAAATCCCAAACCAT TTCCCATTTATGGCATTGTTTATCGAACCCCATATACGCATGCGCATTAA AGCCATGATCGCAAAATGTGGCTAATCAGCAAAACAATTCCTCCCCCACC TCCGTTGTTTCACTTGGGTCAGTTTGAGCAAAAACCTCATAATCGGCAAA GCTGAGTAACAGGAAAAATTACGCTGACAAATAGGCTTTGCAAAAAAGTG ATTTCTAATGTATTTTGTTCTACATATGTATGACATGTTGTTTCGGTAAG AAATGTAGGCACATTTGGCCTATGGGCTGCTACTGGTTTTATCATGACCT CATCCGAAAATTTTCGGCAAAACTCCATCAACCTTTAGCTTCTCACTCAT TGACTGAATGGTATGTTTACTAAGTGACGTCAGGGACAGCTAACTGCAGT TGCGGGTTGTAAGTGCCAGATAGCTTATGTCGCCCCCCGTCTCTTGCATC AATGATATTGAATACTGTTACTTATGGTAGGACTTATTATTTTTCAGGGC TTCAACATCAAGAGTGTGCAATCATCAGGCTTCAGGCTCAATGTGTGGGA CATTGGAGGTAAGACATCTTATGACAACTTAATTTCTTACAGTGGCCAGC AGTATTACTTTACTGTTCTGTATGTACATGTACACATGCCTAAAAAGTGC ATTGTGATATCCATGATAATATACTAAATACCCAGTATTTAATGTCATTA CTCTCATAATCCGCTGGGTACCCTAATTATAAGATCACAACATGAATTTG TGCTGTGAATGTTTTAATGTTAGTAGGGATTTAATTTCACGGTAGGGAGA AAATGGAGTGTTTGCGGTTGTTTTAAGTTTGCAGCTGTACCAATTGTAGC ACTACTGCAGTCACATAACGGAATCACTGGGGCCCACTGTTGTATTTTTG TTCTGCACTCAAAGCACATAGCATAGCGACAAGATTGACGCTTCCTGGTT AGTCACTACTGTGTCCAACAATGTACAAATTTTTACTAGTAGTAGTACAC ACCCCTAATTCTTGAGCAAGAAGCTCTTGAGAAGCTTTTCTTGTTCTAAA TGTTGTGGTCGTATTATACCCGGTGTAATGACGAGAGTAAATGTTACAAA TATATGGGTTAAGAACTCTGAGTGGAGTTGTAATTTCTCATGAATGACTG TCAACACAGAGACTAACAAATTTTTTCTTGTCCTTCCCAGGTCAGAGAAA GATCAGACCATACTGGAAGAACTATTTTGAGAACATTGATATTCTGGTAA GACATTATATTACATCAGAGTAGAGATGGCAATCAGACAGAATCTGCAAT TCTACCAGTACAGATCTCGATCGAGTCACTGTCGATTCTGCCGGTAGAGA TCCCGATCAGAATTTGTATTTTCGGAAAACATAACTTTCAGCTTCCATTG ATGTCACTTTAGATCAACACAGGATACCACATCCCTTGAGCATCCTGATT GGAGTCCCTGTTGACAGAAATTACGATAACGATCTCAACCGATAGAATCA GCAATTCTGCTGCCAGATCGCAATCTCTACCCTGACATATACAGTCAAAC CTGTATTAGCGGTCACCTTTGCATAGCGGCCACCTGCCCATAGTGGTCAC TTTTTGTCGGTCCCTTGGATTTTTCCCATTGACATAAGCATTAAGAATTA GGCTATAGCGGCCACCTGTCCAACGCGGTCGCGGCCAGACGATTTTCGGT CCCGCGAGTACAGTAACACTGCCGATAACGGTCACGGCGCGCCGGTAGAA GCCGCATCGCCACCGCACGCCGGGTTAAAAATCTTCATTTTTTCACGCAG TTATCAAATTTATGCGGCCTCAACTGGATAGGATCATAATAAAGAAAACC AGAATGTTTTATCTTTGTTAGAAAATCCATGGTTTGACGCGAAGTCAAGT ATAGTTTTCTTCACATGGCTTGCGTTTGTACATCGTGGTAAAATTGACAA TTTCTGTGCATTTCGACTGGACAAATATTACGGCAGCCTTTTGGAAAATA CAACCCACACATGTACCTGATGCGGTAAGTTCGTGAAATGTTTGAATGCC GGCCCAATTTCCGTTTTCACCGGGAATTCATTCAAATTGTGCTCAAAACG TGTTTCGCGCAATTTTCAAAATGGCGCTGTTACACGCGCGCTGATACAAA TTGGATTGGTAGCAGCATAAAGGTCAACGGAAGACACCACTGTTACAGAG GTATTATATACTAAATTTATTTTGCTGCAAAGTATCACTCAGGATAATTA CTAAACCAAAAGCTTCAAAATGAATGTGGATAATACTACTATGATGTAAA ATTTGGGCTGTTGCAATTTTCTGAAAAGACAAAAAGCCCTCAAAAGAGCG ACCTTCTTCTGAGTACCCTATTAGCATAATGGTAGATGCTGATCAACACA AGCCACAACAAGAGACTGAGGAAAATTGTCGCCACGATTTTATGTTTGAA AACGGTCGAAAACGAACAGTAAGTGACAACTGAGCAACATGTATTTTGTT CTTAACTAACTANGAGAACGGTCGAAAACGAACAGTAAATGACAACTGAG CAACATGTATTTTGTTCTAATCTAACTAGGAGTAAAAGAACAACAATCTC GCTTCTAAAATGTGCCTTACCTGTTTACATGTGTACTGTACAGTGAATAA ATGTATCTCAGTGGGTACTGAAAACATGTGTCACTCGTGGTCAATTAATC GACATTTTCTCCATAGCGGCCACCTGTTCTTAGCGGCCAGTTTTGGCCGG TCCCTTGAGTGACCGCTATAGACAGGTTTGACTGTATTCAGTGCTGATTT TTAATTGTAAATTAGAGATCAATGATTCATCTTGAGAATTGAAATGTGTC ACTTTTAGTCTCAGTCTTCCTACTTTTGACTTATCAGAAAGGGATGAATG GATTGCATAATTATACTGGTTTCTGTAAGTTTTGAAATCGTTGCAGTGCT TCTATATGTTCAAGTTTTTCGAGGTTAGCTAATTTACTACCACCCTGTGC TATATCTTGCATTTTTGTTAAGCGGTACAGTTGCTTCAACCATGTTTTCA AAGTGTCTCCTTTCCCCTCCGTACACAAAGTCAGTTCACAACAGTACCTG TTGTTTCCCCACAGATCTATGTGATAGACAGTGCGGACCGTAAGCGGTTT GAGGAAACAGGAGAGGTAAGGTTTTCTTACACATATTAAAAGTTAATATT AGGATTATCCGACAGCAAAGTTTTCTTTCGCAATGTCTTACTATAAGTAT GTGATGGAAGGACATCATGTTGCTGTTTTCTTTGTGTGTGTGTGTGTGTG CATGTGTGTGTGTATGTGTGCATACATTTTGTACATGCGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTTACGTCAAAGGTCACAGAATAG CTATATTGGTTATCTATTTTCTTGTCTTTAATTTCCTGCCACTTGAGGCC TTAAGTGGGAAAAAGGGATTTGGCAATCAACCAGAAAGTCGCCGCTGGAA ATATTTCACGGAGGACTGGTATGAGGTCTTTGATTTCCTGATGAATCTTG CATTTACTTTGCTTTGTAGGAATTGGCGGAGTTGTTAGAAGAAGACAAGT TGGCAGGTGTGCCCATGCTCATTTTCGCCAACAAGCAAGACCTGTTCAAC GCTGCGACAGCCACCGAGATTTCCGATGGCCTGGGCCTGGGCTCGATACG GCGAACATGGCAGATCCAGGCGTGTTCGGCCATGTCAGGAGAGGGCGTGG AGGTAGGTTGACTTTTTTTTTTTGGCAAAACCTGAGGAGTGGAGCCAATT TGATAGCTCATGCCTCTGTTTCAGTATAATTCAACTGTAACCTGCTTTGG ATGTTGAAGATATCTATCGTAACTTGATAAATTACAGGAACTACGGAAGA ATTACCCCTAATAGTGGGCTCAAATATATACTTTTATTTATTATCCCTTG GCCATTTGCTCGCAAAGTTTATATATTTTAGAGTTTTTGAAATGTTGACG TTATATGAAGCATACTTAAGAATAAAGTATTACTGATGCCCAAGTAGTTT GCCTAGTACAATAACATTTTTGGCAGCACCTCAGGGGCATAGGCATTTAT ATTTATAACAATATTGAACTTGGCTCTTGTTTATCTTTTACAGGAGGGTA TGAAATGGGTCATACAGACGGTCAGCAAGAAGTGACATGGCGGCTGTATT AGCCCCTAACACAGCCTCACCTAATGCAGGGATAGCTCAGTCGACTGTAT GACCTGTATATGTACATATAAGTACCAAACTCCACTTCCGAACAAAAAAA AGAAAGATCATTCTTCTCACAGTTTTAATCTCATGGAAATGTACAGCTTT TAGGGAATGGCAAGGCATGTCCACAATTTTTGGCTACTAAATATGTACCA TCATTCTGTGAATAGTTTCATCAGGTTGGTAAGTCACCGAATAGACAGAC TCTTTATACACAACAAAGTGTTTTATTCTACCGACGTTTCAGTAACCATC TGTCACCTTCCTCAGGGCAATTCTGACTGGTACACTTTGCACTGCAGCAT AGGTGGCGCTGTTGACAGATGCAGTTCCAAAAGATAATTGAATTAAAAAC ATATTTTTGAGACCACATCTTTAAGCTGAGTGACACCTATAGCTGCAGTT CGAAGTGTACCAGTCCGAATTGCCCTGAAGAAGGTGACAGGCGATCATCA CCAAAACCTCTTTTGAATAAAACACTTAATTCTGTACAATTAGTCTTTTC ATTCAACGTATCATTATTGTAATACAGCACACATTCCATGCTATATATGG TCCTATAACAAAACTATTTTGGTGAGTTGATTTTTTAGTACTTAAATATA GAGAGGTACTTGTGTTCACATTCCGTATATTGTGGGGGAATCGATTGAGA ATTGTTTAGAAAATGTGTTATTAGATATGGCAGAAAATACAAAAGAACAA AGATTCAGAAAGATAGCTATGTTTTAAGTATTGCAGTTTGTATAAGACCA GTGTTTTTGTGTTCCTTCTCATGACTGTAATCTTTATATGCTGTATGAAG TATTGTTCTGTGAAATATAGATATACACATCAAGTATGCTTGAAATCCTG TCGTCTTTCATCTAGACAAAAGAAATATGATTGGCAGCTTGTGATAAAAA AACAGCATTTTCCTTAATTCGTCAGAGGAGTCATACTTTTTAGAATGAAG GATGAAATGTTTTTCAAATCACAACATGTACTGGGTATAACATTTAGTGT TTTTTGTGGATACAATCAATTAAGAGTTCTGGAGGAATAAAGTGATGAAA TGTAAGTTTTCTGAGCACAGGCGTTTTGCATTTTTTGGTATAACATTTAG TGCTTT

Coding sequence (CDS) from alignment at Sc0000026:1460106..1468011-

>Blg00138.0 ID=Blg00138.0|Name=Blg00138.0|organism=Branchiostoma lanceolatum|type=CDS|length=540bp|location=Sequence derived from alignment at Sc0000026:1460106..1468011- (Branchiostoma lanceolatum)
ATGGGACTCCTTGCCCTTCTGCGTAAGCTGAAGAGCAATCCTGAGAAGGA
GCTGAAAATCCTTCTCCTCGGACTTGACAATGCCGGCAAGACAACTCTAC
TAAAAGCCTTAGCGTCAGAAGACATCTCCCATATCACCCCCACACAGGGC
TTCAACATCAAGAGTGTGCAATCATCAGGCTTCAGGCTCAATGTGTGGGA
CATTGGAGGTCAGAGAAAGATCAGACCATACTGGAAGAACTATTTTGAGA
ACATTGATATTCTGATCTATGTGATAGACAGTGCGGACCGTAAGCGGTTT
GAGGAAACAGGAGAGGAATTGGCGGAGTTGTTAGAAGAAGACAAGTTGGC
AGGTGTGCCCATGCTCATTTTCGCCAACAAGCAAGACCTGTTCAACGCTG
CGACAGCCACCGAGATTTCCGATGGCCTGGGCCTGGGCTCGATACGGCGA
ACATGGCAGATCCAGGCGTGTTCGGCCATGTCAGGAGAGGGCGTGGAGGA
GGGTATGAAATGGGTCATACAGACGGTCAGCAAGAAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00138.0-exon-Sc0000026-1570713199:1467937..1468011Blg00138.0-exon-Sc0000026-1570713199:1467937..1468011Branchiostoma lanceolatumexon
Blg00138.0-exon-Sc0000026-1570713199:1465610..1465753Blg00138.0-exon-Sc0000026-1570713199:1465610..1465753Branchiostoma lanceolatumexon
Blg00138.0-exon-Sc0000026-1570713199:1464904..1464964Blg00138.0-exon-Sc0000026-1570713199:1464904..1464964Branchiostoma lanceolatumexon
Blg00138.0-exon-Sc0000026-1570713199:1464216..1464271Blg00138.0-exon-Sc0000026-1570713199:1464216..1464271Branchiostoma lanceolatumexon
Blg00138.0-exon-Sc0000026-1570713199:1462297..1462347Blg00138.0-exon-Sc0000026-1570713199:1462297..1462347Branchiostoma lanceolatumexon
Blg00138.0-exon-Sc0000026-1570713199:1461710..1461892Blg00138.0-exon-Sc0000026-1570713199:1461710..1461892Branchiostoma lanceolatumexon
Blg00138.0-exon-Sc0000026-1570713199:1460106..1461318Blg00138.0-exon-Sc0000026-1570713199:1460106..1461318Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00138.0Blg00138.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1460106..1468011 -
Properties
Property NameValue
GeneIDBlg00138