Blg00125.0 (mRNA) - B. lanceolatum

Overview
NameBlg00125.0
Unique NameBlg00125.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:220956..224567+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00125.0 ID=Blg00125.0|Name=Blg00125.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3612bp|location=Sequence derived from alignment at Sc0000026:220956..224567+ (Branchiostoma lanceolatum)
ATGAGACTTAACTCTGGCCCTGGTCTAGTCATCCTCACCACACCTGCTGC TAAAGGTAAGGCAAGAGCAAGTAAATCTTATGGATGACATCCTCTGCAGA TTCCAAATTTAACGCAAGAGGGCAAAAAATAAAATAAAAAGATGGGTAAC AAAAACAAGATGGATAAATTTTCAAAATAATCTTTTTGTTCTAACATTAC TACGCTTTATACTACTACCCAGTTTGATTTGCTGTTTGTGAAAGGAGTGC AGAAATACAAGTTTTAGTATGATCAATTTGAAACGGTGACTAAGTGTGTG GGGGGGGGGGGGTATTAGTCTTCCCTGGCAGACAGACCTATTAGTAAGTA ACTCAGGCAAGCTCATATAGTTCCCTAAGGGCATTCACCCTGGAAAATCA TTCATGCTGTTTTAAGGGGTGTATTTTAAGTATTCATACGAGTTTTACAG AATACATCTACAAATTTTCATACAATCCACAAGGGCCACTACTGAGAAAC ATACGCAGTTTTAAGAATTCATACAAATTTTACAAGATACGTAATATGAT CATTACTAATTTGATGGACAAGCGCCTGGGTCACTAGACTGAGCGGCAAA TTAAATTCAAGATGGCACTCTGGACTTCCATTTCTTTCTACATTATCTTG GCTTTAAAGAACATTAATATGATTCCATCCTGCTAAACACCTCAGCCTGT TCTAATTCTGCTCAGGCAACATTTCAACGTAATTTAAAACAACTAGCAGG GCGGGACTGAGAATCAGTGATGGCTAGGCGCTGGTCCAACAAATTAGTAA GGATTGAATGTATTTTGTGAAACTCGTATGAATTCCATGAAATTAATCAT CATCTCTAATAAACAGGACTGGACCGTACCAATTCTGTGGACAACATCAT GACTCTGCCATCACCCCCTAGTCATGTGGACCATTCCAGTCTGAGGGGCC TTGACCTGGCGAACAGGGAGGATCAGTCCCACACAGGTGCAGCAGGTACA TGTAGTGCCTGTAATGTTACACTGAACTTTACAGTCGAACAGGTACAGAC AGCTCTACAGGCCAAAAGGATAAAAACACGGCAAGAGCTAAAAGGTCAAA TTCACACAGCCAAACAGGAAACAGAAGCTCTCGTCCACGGTGTCACCAAG CAGGTAAGAGTGCTTACAGATGAGAAAGAGAAAGCACAGAAAATCCTCCT GGAACACAAGGTGACAATTCAACTGTTAGAGGATATCAATAAGACAGGAG TAGCCACAATCGAGAACCTAAAAGCTGAGAACACAAAACTTTTTAATCAT AAGGACAAACTTCAAGATGAAGTCAGAATACTGAGAGAGAAAGATGAGAC ATCACAGAAGCTTCTCTTGGAGAAGACGCAAGAAATCCAACAGTCACAGG AGACAAGAAAGGACACAGAAGCTTTGATTCGAAGTCTGAGCAAGCAGGTA ACAATAGCAACAGAGGAGAAAGAGAAAGCACAGAAAGTCCTCCTGGAACA AAAGGGGACAATAGAACAGTTGCAGGATATCAATAAGACAGGAATAGCCA CAATTGATAAACTGACATCTGAGAACATGAAACTGTCTAATCGGTTATCG ATGGATAACGACGAACATCAAGATGAAGTCAGAACACTCAGAGAGGAAAA TGAGGCATTACAGAAGCTTCTTTCAGAGAAGACCCAAGAAACCCAACAGT CACAGGAGACGAACAAAGACACAGGAGCTAAGCCAAAATCCTTGTTTAGC CAGCTGAGGGGCAGGGTAAAGCAGACAATGGAGCGTCAAAATCAGGGGGA TGACTCAAAGGGGAAGGGGAGACAGTCTCGGCCAGAGAAATCAAGCAAAG AAGCTGCTGTTCAGCATGAAATGTTCACAAACATCCTGCTTGTGGGCTGT AAGGGTAACGGCAAGAGCCACACAGGCAACACCATCCTGGGACAGGAAGC CTTCAGAGTCACCCGCAGAGGAGGAACAGAAAAGTCCAGCCTGGGCAGCA GCAGCCATGAGGTTGATGGAGTCAGTAGGAAGGTGACAGTAGTCGACACC CCCGGGGTCTCCCAGTACATGACAGAGTCTGAGTTTGAGGAGCTGGTTCG AGCTGTGAAGATGGTTCCTGGAGGCTTTGATGCCATCTGTCTGGTCTGGG ACTATACAAGCTCTGATAAGAATGAAGACAAGGAGGTCCAAGTGTTCCAG TCCCTCCACAGGCTGTTTGGTGATGGACTGTACAAACATCTTGTCATCCT GGTCACACATGCTCAGCAGGAGGACATCCCAGAGTTCATTGATGGACTAC CACACAACATGAAGAGAGTTGCTGACAAGGCAAATGCGGTGGTTGCAATA GACAACAGATATAAGAGTGAATCATCATGTCAGCAGTTGCTTCAGCTGTG TCCTACCACTGGCACAAAGTACACTTCTTCAGATCTATCCTCAGAGTGCC AAATCCCCCCGCATGCTGACCTTCACATGGTACTCATCGGCAAATCTGGA GTGGGAAAGAGTTCTACAGCAAACAGCATCCTTGGTGAAGAGGTTTTCAA AGCTGCAACAGTGGCTGCATCCATCACAACAAAGTGTAACTTTCACAAAA GAACATTCAAGAATTCTGACACCAAACTAGCTGTACTGGACACACCAGGA CTGTTTGCTACAGTACCAAACAAAGAAGAGATACAAAAAATGTCTGAGGA GCTCTGCAAAATACCAACTGTATTCCATGATGGTATTCATGCCCTTATCC TAGTAATAAGTGGTATGTCAAGGTTTGCAGAGGAAGACGAAAACGCACTC AAGATTTTTCGGCGCATCTTTGGAGACAGGTTCCTGGACCACACCATAGT ACTGATAACTGGGAAAGATAGTCTGACAAGTAGCAAGGAGGAGTACCTGG CATCAGCACCTCCAGCACTGAGTGACATTCTGAAGAAGTGTCAGGAACGC TGCATATTCTTTGACAATGTCACAACGGATGCGACTGTACGTCGCGAGCA ACTAGCAAAGCTGATCACAATGGCCCAACAAGCTGTAAAGAGGAGGAAGG GTCCATACACTGGAGAGGAAGCACGTGATCCACTCTTTTCCAAAGGTGCA AAGATGATGAGGAAGATCGTTGACTACATGAGGAAGAACGAAGGATCTAT ACCTCCACTGAGTGAAATAGAATTGAAGAACCTTGTTGAGGATGCCAAGG TGTCCGACACTGAACAACAACAGACTGAGCATCCTCAGAATGTTGGAGCT CAGAAATCAGACAGTCTAGTAAAATCAGACAGTCTAGTAGACAGGGCAAG GCAATTTGCTGTAACTGCTTTGTATCATGACACAAGCATTGCCAAAGCAG TATTGCACATAATGAAGCAAATCTCTTTACTGTAAGCTGTAATGTGCATC GTCTGCTAGCCATGCTTGAAAAAGCTGCCATCAAGGACTTCCATCACAAC AGCAAGATATCTTGTATATAAGTAGTTATGCACCTGCAGGGCATGAAATA CCTTTTCCTGCATATCTGCACTGATGCAGGTATAAAGCATGTATTTAGGA ATTGCCTGTATCAAAATTTTCCTGCTCCACTGGTATAGATCACTCTGAAA ATTGGCATTTAA

Coding sequence (CDS) from alignment at Sc0000026:220956..224567+

>Blg00125.0 ID=Blg00125.0|Name=Blg00125.0|organism=Branchiostoma lanceolatum|type=CDS|length=2454bp|location=Sequence derived from alignment at Sc0000026:220956..224567+ (Branchiostoma lanceolatum)
ATGAGACTTAACTCTGGCCCTGGTCTAGTCATCCTCACCACACCTGCTGC
TAAAGGACTGGACCGTACCAATTCTGTGGACAACATCATGACTCTGCCAT
CACCCCCTAGTCATGTGGACCATTCCAGTCTGAGGGGCCTTGACCTGGCG
AACAGGGAGGATCAGTCCCACACAGGTGCAGCAGGTACATGTAGTGCCTG
TAATGTTACACTGAACTTTACAGTCGAACAGGTACAGACAGCTCTACAGG
CCAAAAGGATAAAAACACGGCAAGAGCTAAAAGGTCAAATTCACACAGCC
AAACAGGAAACAGAAGCTCTCGTCCACGGTGTCACCAAGCAGGTAAGAGT
GCTTACAGATGAGAAAGAGAAAGCACAGAAAATCCTCCTGGAACACAAGG
TGACAATTCAACTGTTAGAGGATATCAATAAGACAGGAGTAGCCACAATC
GAGAACCTAAAAGCTGAGAACACAAAACTTTTTAATCATAAGGACAAACT
TCAAGATGAAGTCAGAATACTGAGAGAGAAAGATGAGACATCACAGAAGC
TTCTCTTGGAGAAGACGCAAGAAATCCAACAGTCACAGGAGACAAGAAAG
GACACAGAAGCTTTGATTCGAAGTCTGAGCAAGCAGGTAACAATAGCAAC
AGAGGAGAAAGAGAAAGCACAGAAAGTCCTCCTGGAACAAAAGGGGACAA
TAGAACAGTTGCAGGATATCAATAAGACAGGAATAGCCACAATTGATAAA
CTGACATCTGAGAACATGAAACTGTCTAATCGGTTATCGATGGATAACGA
CGAACATCAAGATGAAGTCAGAACACTCAGAGAGGAAAATGAGGCATTAC
AGAAGCTTCTTTCAGAGAAGACCCAAGAAACCCAACAGTCACAGGAGACG
AACAAAGACACAGGAGCTAAGCCAAAATCCTTGTTTAGCCAGCTGAGGGG
CAGGGTAAAGCAGACAATGGAGCGTCAAAATCAGGGGGATGACTCAAAGG
GGAAGGGGAGACAGTCTCGGCCAGAGAAATCAAGCAAAGAAGCTGCTGTT
CAGCATGAAATGTTCACAAACATCCTGCTTGTGGGCTGTAAGGGTAACGG
CAAGAGCCACACAGGCAACACCATCCTGGGACAGGAAGCCTTCAGAGTCA
CCCGCAGAGGAGGAACAGAAAAGTCCAGCCTGGGCAGCAGCAGCCATGAG
GTTGATGGAGTCAGTAGGAAGGTGACAGTAGTCGACACCCCCGGGGTCTC
CCAGTACATGACAGAGTCTGAGTTTGAGGAGCTGGTTCGAGCTGTGAAGA
TGGTTCCTGGAGGCTTTGATGCCATCTGTCTGGTCTGGGACTATACAAGC
TCTGATAAGAATGAAGACAAGGAGGTCCAAGTGTTCCAGTCCCTCCACAG
GCTGTTTGGTGATGGACTGTACAAACATCTTGTCATCCTGGTCACACATG
CTCAGCAGGAGGACATCCCAGAGTTCATTGATGGACTACCACACAACATG
AAGAGAGTTGCTGACAAGGCAAATGCGGTGGTTGCAATAGACAACAGATA
TAAGAGTGAATCATCATGTCAGCAGTTGCTTCAGCTGTGTCCTACCACTG
GCACAAAGTACACTTCTTCAGATCTATCCTCAGAGTGCCAAATCCCCCCG
CATGCTGACCTTCACATGGTACTCATCGGCAAATCTGGAGTGGGAAAGAG
TTCTACAGCAAACAGCATCCTTGGTGAAGAGGTTTTCAAAGCTGCAACAG
TGGCTGCATCCATCACAACAAAGTGTAACTTTCACAAAAGAACATTCAAG
AATTCTGACACCAAACTAGCTGTACTGGACACACCAGGACTGTTTGCTAC
AGTACCAAACAAAGAAGAGATACAAAAAATGTCTGAGGAGCTCTGCAAAA
TACCAACTGTATTCCATGATGGTATTCATGCCCTTATCCTAGTAATAAGT
GGTATGTCAAGGTTTGCAGAGGAAGACGAAAACGCACTCAAGATTTTTCG
GCGCATCTTTGGAGACAGGTTCCTGGACCACACCATAGTACTGATAACTG
GGAAAGATAGTCTGACAAGTAGCAAGGAGGAGTACCTGGCATCAGCACCT
CCAGCACTGAGTGACATTCTGAAGAAGTGTCAGGAACGCTGCATATTCTT
TGACAATGTCACAACGGATGCGACTGTACGTCGCGAGCAACTAGCAAAGC
TGATCACAATGGCCCAACAAGCTGTAAAGAGGAGGAAGGGTCCATACACT
GGAGAGGAAGCACGTGATCCACTCTTTTCCAAAGGTGCAAAGATGATGAG
GAAGATCGTTGACTACATGAGGAAGAACGAAGGATCTATACCTCCACTGA
GTGAAATAGAATTGAAGAACCTTGTTGAGGATGCCAAGGTGTCCGACACT
GAACAACAACAGACTGAGCATCCTCAGAATATCACTCTGAAAATTGGCAT
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00125.0Blg00125.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00125.0-exon-Sc0000026-1570713199:220956..221010Blg00125.0-exon-Sc0000026-1570713199:220956..221010Branchiostoma lanceolatumexon
Blg00125.0-exon-Sc0000026-1570713199:221822..224196Blg00125.0-exon-Sc0000026-1570713199:221822..224196Branchiostoma lanceolatumexon
Blg00125.0-exon-Sc0000026-1570713199:224544..224567Blg00125.0-exon-Sc0000026-1570713199:224544..224567Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:220956..224567 +
Properties
Property NameValue
GeneIDBlg00125