Blg00121.0 (mRNA) - B. lanceolatum

Overview
NameBlg00121.0
Unique NameBlg00121.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1216160..1218877-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00121.0 ID=Blg00121.0|Name=Blg00121.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2718bp|location=Sequence derived from alignment at Sc0000026:1216160..1218877- (Branchiostoma lanceolatum)
ATGGCTATGGCTGAGGTAACGTTACGTTTAATATTTTTGACGGCATTTTC TGTTGGGAAAAGATCAGGGAGGATGCTGGGTAGGGACGAGATGGGGGGGG GGCTGTTTTCGGTGCAAATATCACAGCTTTTTTTTCATGTCGCCTCAACG CAAAACAGTACTTCAGAAGATTTGCCCGTGTCTATACAATCTTGATTCCT GGCACGTCCGCCGTAATGTCATTGTTAACGTTACATAGATTTTGAGACCT TTAGTTTACACCTTTATTTATATGGGAATTAAATTGACCCCCCATTGAGT TAATCGTCTTGTCCATTCCGTTTCTTTATAGCGTCTGAGTCCATTGGGCG AATCTACTTCTTTAAATGGAGGGGGGGTTTGGGAAAGGGGGAACAGGAAC TAATTATGATCAGAAACTACGTTTACTTCTTCTTTCTCAAGCTACTTTGT TACATATCATTAAGGAATCCGAAAATATTCACTTCTCATTAACCTGACGT GTAAATATCGTATAGATGGTGAACAAATCATATTGGCTTTGATCACTTTA TAACGCTATATACTGTGAAGTGCATGGCGCCCGTATCATCATCAGGGAAA TGCAATGCCCGATGCATACAAGGACTAGGCACCAATATGTGCCAAACCTA AAGTTTCAGCGTTTTAAAGAACAATTTTATACGATGCTTTGTTTGCCCTT GCTGTTGAAATACTAAGTAGATACATTTGGCACCGTGCGCGAGCGCCACT ATGCGGAGATTGATAAATCTGCAAGTTTCTTTCCATTCAGGCTTCTGCAT TCATAGCACTTCTGCTTTCATGCATGTTTTGACAATGTATATCGTGCACG ATAGTACAAAGAAACCATTTCGACTTTTCTGTGGTAATACAGCTTTGCTG GAAGGTCTTCATTTTATGCGTAATACAATGTAATAAGAAATATTCTATTT CTCAAATATTAATGCCAGAGCCATTTTGAATACCTGGTTTGCGAGAAACA TCTGCCACCTCAGTTTACCCTAAAAAAAATGTCCACATGCAGTGTTGCCT TAACAACTAATGTTGTCCACTCAATACTTTTACCGTCCATTTTTTTCATG TTAACATTCACGGAATTCGAAGGAAAACATACAATTTGTGCCCCATGTCT TCTTGTTCTACCGTTCCAAACAAAAGGTCAATGACCTGGACCAGACGGCT GTCGCCATGATTACCCAGGGGTGTTTACACTAATGCAATTACATGATGTA GCAAGTGGCAGAAAAAAGCTTGGTCACTGTATATATGAATGTGTTTGTTT AAGGATAAACACATCAGTAGTTTGTTAGGCTAGACCATACAAATCAAAAA TTTTGTATTTGCTTGCAAATGTTACCTTTCTAATTTTACAATCATCGTGA CAATTTTCTGAGTCAAATCTTATTTTGTAAATATTTAGCAATATCTTTAG ATGCATTTGCCTATGTGTATGTGTTTGTCAATATGGGCCGTCGAGCCTGA AATAAACAATAAACATTTTGTCATTTTCTTACCTTACAGATACCGACCCG TGAAGCACACTGTAACCGTCTGTTCGCCATGAGTGGAAGAGAGGACCTCA CGAACCAGGGCGCTACAAAACTGGACATCGCACCTCCAGATGACGACAGG AAACTTAAAGAAGCCTCAAGGAAGACTCAACCTCAGGGGAACAAGAGTCA TGGTGCAGAGATGTTCAAAGGTAAGAAAAGTCAAAGATGGCAGACCCTCT CGTGTGTGTGTGTGAGTGTGTGTGTGTGCGCGTGTGTCTGTCTGTGTGTG TGTGCGTGCATGTGTGTGTCTGTCTGTGTGTGTGCTCGTGTGTGTGTGGC TGTGTGTTTATGTGTGTGTGTGTGTGTGTCTGTGTGTCTATGTGTGTGTG TGTGTCTGTGTCCGGATTTTGCCTCAAACATAAAATAAGAACCTCATGAT GGATTATGATGATAGTTAGTAAGTGGGTAGGTGTTGTTATGACAAAGGTC AAGGTTGATTTTGGGCCTCCTGAAGTGTGGCCTTGTTTGTATTGGGAGTC TGAGAAACACACGCAGACATACATGTACTTTCCAGGCAGAAGTTAGGCGC CGGCTTGTTTTTAATGTCTTTTTCGGCCTTTCTATTCTGCCAGATTTTCT TGGTGTATGTTAGGCCAATATATTGCAAGAAAAAGTGACAAAATAGACGT ACCGACAAAACGCCTAAAAAATATGTATAAGACAAGCGAGAGCCGACCGT CTGCTTGGAGAAGAAAGAGTAATACAAACACACAGGTCAAAAATAATATT TCACATCCTTGAAGAAGGAAGAAAATTGCTAGGCAATAAAGACGACCAGG CTAGAAAAATCATGGGGAAGGGGGGTAAAATGCATTGGGGAATGACAATA GTAAAAAACAAATACACAAGAAACTTGCAAAAAGGATACTGACAAAATAG ATATAAGGCAGCGAAAAACCTTGACTGTTACCATGCAAGAATGAGCAAAA CGCTCAAGACATTCTAAGAAAGTTGGAAGTCACAGCATTTCCTGGCTAGG CTGTCTCCTGCTTTAAAAGAAAGACGGTGAACTAGACACACGAATTTAGA CTACAAAACAGTCTGCCCAGTGTTTACTTAGCCCTAACTTGTCTATTTTC TTTTTTCCTCTTCCACAGCGCACTCTTCATCCAATCCGCAAGGTGGCGCT TCAACCGGGAAGAAATAG

Coding sequence (CDS) from alignment at Sc0000026:1216160..1218877-

>Blg00121.0 ID=Blg00121.0|Name=Blg00121.0|organism=Branchiostoma lanceolatum|type=CDS|length=246bp|location=Sequence derived from alignment at Sc0000026:1216160..1218877- (Branchiostoma lanceolatum)
ATGGCTATGGCTGAGATACCGACCCGTGAAGCACACTGTAACCGTCTGTT
CGCCATGAGTGGAAGAGAGGACCTCACGAACCAGGGCGCTACAAAACTGG
ACATCGCACCTCCAGATGACGACAGGAAACTTAAAGAAGCCTCAAGGAAG
ACTCAACCTCAGGGGAACAAGAGTCATGGTGCAGAGATGTTCAAAGCGCA
CTCTTCATCCAATCCGCAAGGTGGCGCTTCAACCGGGAAGAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00121.0Blg00121.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00121.0-exon-Sc0000026-1570713199:1218863..1218877Blg00121.0-exon-Sc0000026-1570713199:1218863..1218877Branchiostoma lanceolatumexon
Blg00121.0-exon-Sc0000026-1570713199:1217158..1217338Blg00121.0-exon-Sc0000026-1570713199:1217158..1217338Branchiostoma lanceolatumexon
Blg00121.0-exon-Sc0000026-1570713199:1216160..1216209Blg00121.0-exon-Sc0000026-1570713199:1216160..1216209Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1216160..1218877 -
Properties
Property NameValue
GeneIDBlg00121