Blg00119.0 (mRNA) - B. lanceolatum

Overview
NameBlg00119.0
Unique NameBlg00119.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1094594..1097409-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00119.0 ID=Blg00119.0|Name=Blg00119.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2816bp|location=Sequence derived from alignment at Sc0000026:1094594..1097409- (Branchiostoma lanceolatum)
ATGGCCGGATTGGTGATCGTGCTGACAGGAGGCTGCGGTTATGTCGGCAG CCGCATGGTGGCGAAGATGGCCAGAGAACAAGAGACAGGTGTGCGCGAGC TCCGGGTCGTGGACGTCAACACAAGAGGTTACCGGGCGCCTGAGCCAACC AACGGTATTCTTTTAATCTCCAAGCTGATCTAAAGGTAGCAAGGCAGTAT CCGAAGGGCCAACCAGTATCCCAAAGGCCTAAATGAGGCTTTTTGCCTTC GCCGTGAGGCAGAAGGGTATGCGTTTGGTCGGGATTTGTGGAGTGATGGT GTCTGCGGTATAACTCTCGAAGATAAGATCGGATGCTGGTAATTTTTGGT AGGTAAGTTTCTGTTGGGAAGACAAAGGTCAAGTTCGAAGATGGGTTTTC TGGGATGTTCCTTTGGCGCTGTAGTGGAAGTTTTGTGCTTAACGATTAGT TTGTTGGCGACATAACTCGAGAGAGATTTACTGGATCGTGATGAAATTTG GTAGGTTGTTGGGGGTAGGGAAAACGAAGGTCAAGTTCGAAGATGGGTCT TCTGGGGTGTTCCTACGGTACTACAGGGGGCATTTTATTATCTAAAATTT GGAGGAGGATAACTAAAGCAGGTTTTGGTGGATCTTAATTGTTTTGGGCA GGTAGAAACGATTAGTGATGATTAACATAATGAGATGCAAATCAGGTCAT TCTTTCCATGATTAATAAGAAAAAGTGAAATTCCCTTTCAATTTGCTATT ATGTCTATATATTCAGGTTAAATTGCACTGACAGGCCTGCGGGCGGATGA TCTACTTTCCCGGGAGCGCTCCTCATGGGACGTCACCGGAGTCCAGTTTG CTTGCCAGTTCTTTTTCTTCCTCTTCTGCCCAAATCTAAGTAGATGTGAG GTGGTAGCTCTACCAATGGTATTGCAGAAAGTTAAATGCACCTTGTACGT GGTTCTGATGTTATAGTTGAGATGTAGGTACCTTAAAGAAAGGTAAATAC ACCTGGCCATAGATTATGCTTATGAGGACCTAATTTGCATAATCTATGCT GAAACTTGTATTTCCCTTGCTGTAAAAGCTACGGATGTAATATTTGAGAT TAGGAAAGGTGAACATACCTGGACATAAATCATGAGGACCTCATTTGCAT GATTTTTGCAGAAACTTGTATTTCCCCTACGGTACATGCTATGGATGCCA TATTTGAGATGTAGGCACCTTTAGGAAAGGTGAATGTACCTCGACATAGA CTATGCTAATTATGACCTCATTTTCATAATTCATGCAGAAAATTATATTT CCCTTCTGGTAAATACTTTGGATGTCATATCTAATATGTAGGTACCTTTT GGATAGGTACATACACCTGGACATGAATTATGCTAATGAGAACATCATTT GCATAGTTTATGCAGAAACGTGTATTTCCCTTACGATAAATCCCATGGAT GCCATATTTGAGACGTAGGTACCTCTAGGAAAGGTGAATACACCTGGACA TAACTTATGCTAATGCGGACCTCCTTTCTATACTTCATGCAGAAACTTCA TAATTCCTGTATAGTAAATGCTAAGGTGTTTCAGGTGTACGACGTTTCTG ACGCAACACGACGTTTCTTACGCACCACGACGTTTCTTACGCAACACGAC GTTTTTAACGCAACACGACATTTCTCACGCAGCACGACATTTTCTAACGC AACACGGCGTTTTTTACGCAACACGACGTTTTCAACGCAACACGATGTTT CTTAGGCAACACGACGTTTCTCACGCAACACAACATTTCTTAACGCAACA CGACGTTTCTTACGCAACACGACGTTTTTTACACAACACGACGTTTTTAA TGCAACACGGCGTTTCTTACGCAACACGACGTTTCTTACGCAACACGACG TTTCTTACGCAACACGACGTTTCTTACGCAACACGACGTTTCTTACGCAA CACGACGTTTCTTACGCAACACAACGTTTTTTTTACGCAACACGATGTTT CTACATGACGTTTCTCCTCCACAGGGATGAAGATAGCGGTGATGCAGGGG GACGTCCGTGACGAGGCCCGGATGCTGGAGGTCTGCACCGGGGCTGACGT CATCATCCACACCGCGGCACTGCTGGATTTCATGGGGAAGTTTCCGGACC AAGTCACGTGGGACGTCAACGTCAAGGGTGAGTAGCAGACTCGCGCCTTT TTTTATACTTCGGTCACAATTGAAAAAAGGGGCCCCGTCGGGTAGTTTTT TTTCTTCACTTTGAGACTTGACCCCTACGTGCCCCCACTGGACACCCTAT GGTAACCAGGCTATTTTAGGCATGGCCGGGCCCCTGGAATAGTTTAACTC TGAGTTGAAAAATCAATCCAGGACCCGGTAACAAATGTACGTCGTCGTAA ACTAATCGTGAAACACAGAGAGGTACCATCCCGGGACAGATTTGTCGCTT CCGGCCCCGGCCTGGGCTACACCCGCCACGTGCACAGGTGCAACCTTGAC CGCAGCATGAGTTATTTACCTGTGTGACATGGCATTAGTCCTGAACACGT ACAAGACGTCTAAAACACGCCGGACCCTATATTTGCTTAAAGATTGATAT TCCGTCACTTTCCCAGGCACGGAGGTGATGCTGCGGAGCTGTCTGGCCGC GGACGTGCCGTTCTTCATCAACGTCAGTAGCGTCGAGGCGTTCGGGCCGA ACCGGCGGGGGGACCCCGTACCTGACGGGGACGAGAACACGCCGTACGAC AGCTCCACACACTCCTTCTTCTACGCCACCACCAAGGCGGAGGCACGTCT CCTTTGGTCTTCTTAG

Coding sequence (CDS) from alignment at Sc0000026:1094594..1097409-

>Blg00119.0 ID=Blg00119.0|Name=Blg00119.0|organism=Branchiostoma lanceolatum|type=CDS|length=507bp|location=Sequence derived from alignment at Sc0000026:1094594..1097409- (Branchiostoma lanceolatum)
ATGGCCGGATTGGTGATCGTGCTGACAGGAGGCTGCGGTTATGTCGGCAG
CCGCATGGTGGCGAAGATGGCCAGAGAACAAGAGACAGGTGTGCGCGAGC
TCCGGGTCGTGGACGTCAACACAAGAGGTTACCGGGCGCCTGAGCCAACC
AACGGGATGAAGATAGCGGTGATGCAGGGGGACGTCCGTGACGAGGCCCG
GATGCTGGAGGTCTGCACCGGGGCTGACGTCATCATCCACACCGCGGCAC
TGCTGGATTTCATGGGGAAGTTTCCGGACCAAGTCACGTGGGACGTCAAC
GTCAAGGGCACGGAGGTGATGCTGCGGAGCTGTCTGGCCGCGGACGTGCC
GTTCTTCATCAACGTCAGTAGCGTCGAGGCGTTCGGGCCGAACCGGCGGG
GGGACCCCGTACCTGACGGGGACGAGAACACGCCGTACGACAGCTCCACA
CACTCCTTCTTCTACGCCACCACCAAGGCGGAGGCACGTCTCCTTTGGTC
TTCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00119.0Blg00119.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00119.0-exon-Sc0000026-1570713199:1097256..1097409Blg00119.0-exon-Sc0000026-1570713199:1097256..1097409Branchiostoma lanceolatumexon
Blg00119.0-exon-Sc0000026-1570713199:1095233..1095385Blg00119.0-exon-Sc0000026-1570713199:1095233..1095385Branchiostoma lanceolatumexon
Blg00119.0-exon-Sc0000026-1570713199:1094594..1094793Blg00119.0-exon-Sc0000026-1570713199:1094594..1094793Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1094594..1097409 -
Properties
Property NameValue
GeneIDBlg00119