Blg00094.0 (mRNA) - B. lanceolatum

Overview
NameBlg00094.0
Unique NameBlg00094.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2139096..2142685-

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00094.0 ID=Blg00094.0|Name=Blg00094.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3590bp|location=Sequence derived from alignment at Sc0000026:2139096..2142685- (Branchiostoma lanceolatum)
ATGGTGAATGTAGGCTTACATGTAGCTATGCTGAAATATTAGGTGTGAAA TGATTCAGTCTATTTTTCTAAAACATTTTGACACAATTCAAATTTCTCCT ATTAGAATTGGAGATTGTCCTGGTAGAATTCCAATCTCTACTTGTAGAAT CTGAAGTTCTCCTAGTAGAGATTGGAATCCCAATATTCAGAACCCGATTC CAATCTCTACTAGTAGAGATTGGAATTCCAATCTCTACTAGTAGAGTTCC GGACTCTACTAGTAGAGATTGGAATTCCAGTCTCTACTAGTAGAGATTGG AATTCCAATCTCTACTAGTAGAGTTCCGGACTCTACTGGATTCCAATCTC TACTGTGACATATACATTTCTTTAAAGCTCAAAACCTTTATTTTACCGTA GCAAACTACCCACTGTGGCGAAGAAAAACTTTCCGGTAGCTACATCGGAG ACTCCGACCTTCTCTTGGATAAACCACAATGGGTAAGTTATCAATTCTAT CAGCCTTCTTAAAGGCAACCAAAGCAATGTTAGCACCTAAAATTGGAAAT TTAAAAAAAATGATGAAATTTTTATGGAAGTGACATTTCCAAACACTGTT CAGCACATTTTCGTAATGACTTCGTACTTTGAGCATTTTAAAACCACGCA AAAACGTACCGTAAGATGATCCTCTTAGTTTCGCGAATCTATAAAAGCCC CAGCGACGATTTTCTGTGAGGTCTCACATCGCAACGTGGACGTCATAATT TGCATCATGGATGTAGCTATACATTGTGATTGGTTTGTTTGAACTGGTCA TGTATAGAATTGACTAAATGAATTGACTTTCAAAATCCGATTTTCGGAGC CTTATATCTCTTGGGTTTCCTTTAAAACCAATTGAGATCAGAGGTCGGAC ACTCAATTCCTCGCCTGTTGATTGCGTAAATCTGCCATCAACGTGTATAG GGTAACTTCAGTCGTCAAACCTTTGCACATAAAACACACTTACCGTAAAC GATAACGCCAAAGGGATGTTCCGGTGTGTTTGGCTGAGAACACGAGCCGC ATAGCGAAGCCAAACTGCACTGATACTAGCTACTTGAACTTTTTTGTTTT GAGTGGAAATTAACTTTCCTATTTCACTTAGGTGTTTAAAAAAAATGATT GTGTGAAATCATGTTTCTACGTAGGCTAATTCTGTCCAGCGTGCTCGACT CCTTGCCCCGGTCCTGGGCCGGTTCAGGGACACCCTTCTCCGCCTGGCCA ACAGACAAAGCAGCGGGGAACTCAGGGAATGTCTGGAGAGTTACCGAGAA GAACAGAGCAGCCTGGCCAACATGCTGTCTTCCTTTGTACGATATGTCGT CATTTGTTCTATATTTAGAATTAATCCTGCGCTTCTGTATATCCTACAAG TAAAGTAATACGCTAATCTGATTGATTGATTGATTGATTGATTGATTGAT TGATTGATTGCTAAAACACCAGACCTTGCAGTAAAGGGAAGAACCGTACC ACATTATTTTTCTGCAAATACGACTGACGTTAAATATGGTACAAGACAAC TGTCAAGCAGGTGTTTTCCCCTGCAATCCCAGTGTAGAATTTTGTTGTTC TTGACATATACCTACAGGCGACAGAGATCCATGAAAGCTTGGGCGTCTAC GCGCACTCGGAGCCCCTCTTCCCTCGCTCTGCGACAGTTGAAGGAAGGGT CACTATAGCTTTGGCTGATTATGCAGAACGTGGGATTTCGCCGGTCAGTA AATTTGAAAGAGAGTAGGAAGAAAAATATTTTTATTAAAACGGTAGTAGG CTATGTATCATTTTGAGGCAGTCTGTGGTTTCACAGTCGTGGAGCTCATG ATTTAACCGCAATAAGTGTAGTATAAGGATAATCGGGATGTTCACAATTG TAAATACGTGTGCGCACAGACATATCGGGGCGTGCATGGCCTGCATCGAT AGGTTTGCTTAGCAATGTCCAGACGTATTAAGTTTACTTCTCATGGCCTT CACTATTGACCGTGCTGATGCGGACTTAGAATCTTGAACCTCTTTATTGT CTTGGGCTGATCTGTGTGTGTGCCACACTATCATAAGCTTGGTGTGTGTG TGTATGTGTGTGTGTGTGTGTGTGTGTNTTACTTAGGTGTTTAAAAAATA ATAATTGTTTAGAATCATGTTTCTACGTAGGCTAATTCTGTCCAGCGTGC CCGACTCCTTGCCCCGGTCCTGGGCCGGTTCAGGGACACCCTTCTCCGCC TGGCCAACCGACAAAGCAGCGGGGAACTCAGGGAATGTCTGAAGGGTTAC CAAGAAGAACAGAGCAGCCTGGCTAACATGCTGTCTTCCTTTGTACGATA TGTCGTCATTTGTTCCATATTTAGAATTAATCCTGCGCTTCTGTTTATCC TACAAGTAAAGTAATACATTAATCTAATCTAATCTAATTGATTGATTGAT TGATTGATTGATTGCTAAAACAAACAAAATATGAAATTTGTTCCATATTT AGAATTACTCCTGCGCTTCTATATATCTTACAAGTAAAGTAATACGTTAA TCAAATCTAATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA TTGATTGATTGATTGATTGATTGGTTGATTGAATGATTGAATGAATGATT GATTGGTTGCTAAAACACCAAACCTTGCAGTAAAGGGAAGAACCGTACCA CATTATTTTTCTGCAAATACGACTGATGTTAAATATGGTATAAGACAACT GTCCAGCCGGTGTTTTCCCCTGCAATCGCCGTGTAGAATTTTGTTGTTCT TGACATATACCTACAGGCGACAGAGATCCAGGAAAGCTTGGGCGTCTACG CACACTCGGATCCCCTCTACCCTCGCTCTGCGACAGTTGAAGGAAGAGTC ACTGTAGCTTTGGCTGATTATGCAGAACGTGGGATCTCGCCGGTCAGTAA ATTTGAAAGAGAGAAGGAAGAAAAATATTTTTATTAAAATGGCAGTAGGC TATGTATCATTTGCACGCTGTCTGTGGTTTCACAGTCGTGGAGCTCATGA TTTAACCGCAATAAGTGTAGTATAAGGATAATCGGGATGTTCACAATTGT AAATACGTGTGCGCACAGACATATCGGGGCGTGCATGGCCTGCATCGATA GGTTTGCTTAGCAATGTCCAGACGTATTAAGTTTACTTCTCATGGCCTTC ACTATTGACCGTGCTGATGCGGACTTAGAATCTTGAACCTCTTTATTGTC TTGGGCTGATCTGTGTGTGTGCCACACTATCATAAGCTTGGTGTGTGTGT GTATGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTTTGTATTTCCAA TCTCACAGATGCTGAGTTATGTATTTTTTTAAATACATTCTAGGCATGTC GTATGAACAGAGGGGCAATATCAATACTTGAGTAACATTTCATTTAACTT ACCCTTGTTGTATTTGTCAATAGTTGGAAACTGTGGCGGTGGATCCGGCC TACTGGCGACTCGTACTCTTAGATATGGACGTCGCCATGTTGGAATTGAG CCGCATCGGCCATCTGTTGGCCTCGACATGTGAAGAATGA

Coding sequence (CDS) from alignment at Sc0000026:2139096..2142685-

>Blg00094.0 ID=Blg00094.0|Name=Blg00094.0|organism=Branchiostoma lanceolatum|type=CDS|length=795bp|location=Sequence derived from alignment at Sc0000026:2139096..2142685- (Branchiostoma lanceolatum)
ATGCAAACTACCCACTGTGGCGAAGAAAAACTTTCCGGTAGCTACATCGG
AGACTCCGACCTTCTCTTGGATAAACCACAATGGGCTAATTCTGTCCAGC
GTGCTCGACTCCTTGCCCCGGTCCTGGGCCGGTTCAGGGACACCCTTCTC
CGCCTGGCCAACAGACAAAGCAGCGGGGAACTCAGGGAATGTCTGGAGAG
TTACCGAGAAGAACAGAGCAGCCTGGCCAACATGCTGTCTTCCTTTGTAC
GATATGCGACAGAGATCCATGAAAGCTTGGGCGTCTACGCGCACTCGGAG
CCCCTCTTCCCTCGCTCTGCGACAGTTGAAGGAAGGGTCACTATAGCTTT
GGCTGATTATGCAGAACGTGGGATTTCGCCGGCTAATTCTGTCCAGCGTG
CCCGACTCCTTGCCCCGGTCCTGGGCCGGTTCAGGGACACCCTTCTCCGC
CTGGCCAACCGACAAAGCAGCGGGGAACTCAGGGAATGTCTGAAGGGTTA
CCAAGAAGAACAGAGCAGCCTGGCTAACATGCTGTCTTCCTTTGTACGAT
ATGCGACAGAGATCCAGGAAAGCTTGGGCGTCTACGCACACTCGGATCCC
CTCTACCCTCGCTCTGCGACAGTTGAAGGAAGAGTCACTGTAGCTTTGGC
TGATTATGCAGAACGTGGGATCTCGCCGTTGGAAACTGTGGCGGTGGATC
CGGCCTACTGGCGACTCGTACTCTTAGATATGGACGTCGCCATGTTGGAA
TTGAGCCGCATCGGCCATCTGTTGGCCTCGACATGTGAAGAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00094.0-exon-Sc0000026-1570713199:2142683..2142685Blg00094.0-exon-Sc0000026-1570713199:2142683..2142685Branchiostoma lanceolatumexon
Blg00094.0-exon-Sc0000026-1570713199:2142204..2142284Blg00094.0-exon-Sc0000026-1570713199:2142204..2142284Branchiostoma lanceolatumexon
Blg00094.0-exon-Sc0000026-1570713199:2141341..2141511Blg00094.0-exon-Sc0000026-1570713199:2141341..2141511Branchiostoma lanceolatumexon
Blg00094.0-exon-Sc0000026-1570713199:2140943..2141068Blg00094.0-exon-Sc0000026-1570713199:2140943..2141068Branchiostoma lanceolatumexon
Blg00094.0-exon-Sc0000026-1570713199:2140335..2140505Blg00094.0-exon-Sc0000026-1570713199:2140335..2140505Branchiostoma lanceolatumexon
Blg00094.0-exon-Sc0000026-1570713199:2139744..2139869Blg00094.0-exon-Sc0000026-1570713199:2139744..2139869Branchiostoma lanceolatumexon
Blg00094.0-exon-Sc0000026-1570713199:2139096..2139212Blg00094.0-exon-Sc0000026-1570713199:2139096..2139212Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00094.0Blg00094.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2139096..2142685 -
Properties
Property NameValue
GeneIDBlg00094