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Blg00089.0 (mRNA) - B. lanceolatum

Overview
NameBlg00089.0
Unique NameBlg00089.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2195218..2197245-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00089.0 ID=Blg00089.0|Name=Blg00089.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2028bp|location=Sequence derived from alignment at Sc0000026:2195218..2197245- (Branchiostoma lanceolatum)
ATGACCGTAAAGATCGTCAAAGCCACGGACAAGAACGCACCACAGGATGG GTCCACTCTAGCAACTGACAAGGCACAACGGCCTACCGAAATGACAGCTG TCTACACTTCTAAACCTACCCGGCAGAACGGAAGGATGACGGAAAGGATG AGCAAAACCATGAAGACCTCCAAGCAGGATGGCACTACTCCAGCAACTGA CAAGGCACAATGGCCTACCGAGATGACAGCTGTCTACACTTCTAAACCTA CCCGGCAGATTGGAAGGATGACAGAAAGCATGAGCAAAACCACGGAGATG AATCCCACGCAGGATGACATCGCTCCTGCAGCTGATCAACCACAACAGAA CATGGTGATGATGATTGTCATCTACAGCACAAGCACATTCTTTGCTCTGT TCTCTCTGTACAGGGTAGCGGTCTCGTGCCGCAAGTGCTACAACCAGCGA CTAATCCAGCGTCACTACTTACATGGCAATGTAGGCGCTATTGGAGGCAT ACCACTGCAAAACATCCAGCCACCGCCCGCCGTTGCCCCCACGACTGGGA ACCCTCTTCCTCCGCACCAAACATATGCTGAGATCCCGGACGACACCCCC ATCGATCCGTATGCGGAAACGACGCGCTTGGAAAATCCAGTGTACGCTGC AGACGTGACAGAACCAACAGCCGCAACGTCGATCTCGAATCCACCCCCGC GATCCAACATGCCTTTAATGGCCCCATCACAATCAGAAGGCTCGAGCACA ACTCGGACGGATAATGCCCCAGTCCCACCTCCACGACCCATCGCACCAGC AGACTGCAGCGACTCTACCTACTACCCACCAGGCACGAAGACGACTCCAA CAATTGAGATACCGGATCCACTTCCCGGAACCAACAGAAGCGTAGACCCC AAAGTCTCCACACAGCCACAAGGCCTGGAGATGCGTCAGACACAGACGAT CCCGGATCCTCTTCCACGGACTCACACGTACATCAACTCCAACGTCTCCA CACAACCGCAAGACGCGGATATGCCAAAACAGATACCACCATCCGGGGCC TTACCACACCTTCACGGCTCGGGCCAAAACGTGGAAGACGATGATCCCAA CATTTACCTTGACCTAAACAGCACACCACGAGACTCTGGCCCGAAGATGA CTCAAGCAGAAGACGCTCCGGATCCACTTCCACGAACCAACAAATACGTC AACCCCAACGCCTCATCACAACCTAAAGGCTCGGACCAAGAAGAGGAAGT CGACAGCCCCAACATTTACCTTGACCTGAACGGCCCACCGCGCTACTCTC GGTCGGAGATGCCTAACGAAGAAGACGATCCGGATCCACTTCTACGGACC AACAGAGTCAATTCCAACATCTCCTCACAACTATGTGGCGCAGAGATGCC TCAGAAAGAGATGATTCCGGATCCTCTTCCACGGACTCACACGTACGTTA ACTCGAACGTCTCCTCACAACAACGCGGCTCACAGGGGACAAATCAGGAG GAGATTCCAGATCCTCTTCCACGGACTCACACGTACGTTAACTCGAACGT CTCCTCACAACAACGTGGCTCACAGAGGCCAAATCAGGAGGAGATTCCGG ATCCGCTTCCACGGACTCACACGTACGTCAACTCCAACGTCTCCTCACAA CGAGGTGGCTCGCAGAGGCTAAATCAGAAGGAGATTCCGGATCCTCTTCC ACGGACTCACACGTACATTAACTCCAACATCTCACGATCACAAGATCCGG AGATTCCCAGACAGATGTCACCATCTGGGGCCTCACCACACGCTCAAGAC TCGAAACAAGAAGAGGAAGTCGAGGGCCCCAACATTTACCTTGATCTTAA CGGCCCATCAGGCTTCACTGATACATAGCTTCATAACCTGAACTCAATAC TGTGCTATGCCCTGGCAAAATTGATTCGTCTATTTCTATTTATATAAAGG TCTCAAAGGTGCAAAAAATGTCATTCAGAGTATCTCCAACATACTTAAAC AATCAACACCCTGATGCCTTGCAGGAAC

Coding sequence (CDS) from alignment at Sc0000026:2195218..2197245-

>Blg00089.0 ID=Blg00089.0|Name=Blg00089.0|organism=Branchiostoma lanceolatum|type=CDS|length=1878bp|location=Sequence derived from alignment at Sc0000026:2195218..2197245- (Branchiostoma lanceolatum)
ATGACCGTAAAGATCGTCAAAGCCACGGACAAGAACGCACCACAGGATGG
GTCCACTCTAGCAACTGACAAGGCACAACGGCCTACCGAAATGACAGCTG
TCTACACTTCTAAACCTACCCGGCAGAACGGAAGGATGACGGAAAGGATG
AGCAAAACCATGAAGACCTCCAAGCAGGATGGCACTACTCCAGCAACTGA
CAAGGCACAATGGCCTACCGAGATGACAGCTGTCTACACTTCTAAACCTA
CCCGGCAGATTGGAAGGATGACAGAAAGCATGAGCAAAACCACGGAGATG
AATCCCACGCAGGATGACATCGCTCCTGCAGCTGATCAACCACAACAGAA
CATGGTGATGATGATTGTCATCTACAGCACAAGCACATTCTTTGCTCTGT
TCTCTCTGTACAGGGTAGCGGTCTCGTGCCGCAAGTGCTACAACCAGCGA
CTAATCCAGCGTCACTACTTACATGGCAATGTAGGCGCTATTGGAGGCAT
ACCACTGCAAAACATCCAGCCACCGCCCGCCGTTGCCCCCACGACTGGGA
ACCCTCTTCCTCCGCACCAAACATATGCTGAGATCCCGGACGACACCCCC
ATCGATCCGTATGCGGAAACGACGCGCTTGGAAAATCCAGTGTACGCTGC
AGACGTGACAGAACCAACAGCCGCAACGTCGATCTCGAATCCACCCCCGC
GATCCAACATGCCTTTAATGGCCCCATCACAATCAGAAGGCTCGAGCACA
ACTCGGACGGATAATGCCCCAGTCCCACCTCCACGACCCATCGCACCAGC
AGACTGCAGCGACTCTACCTACTACCCACCAGGCACGAAGACGACTCCAA
CAATTGAGATACCGGATCCACTTCCCGGAACCAACAGAAGCGTAGACCCC
AAAGTCTCCACACAGCCACAAGGCCTGGAGATGCGTCAGACACAGACGAT
CCCGGATCCTCTTCCACGGACTCACACGTACATCAACTCCAACGTCTCCA
CACAACCGCAAGACGCGGATATGCCAAAACAGATACCACCATCCGGGGCC
TTACCACACCTTCACGGCTCGGGCCAAAACGTGGAAGACGATGATCCCAA
CATTTACCTTGACCTAAACAGCACACCACGAGACTCTGGCCCGAAGATGA
CTCAAGCAGAAGACGCTCCGGATCCACTTCCACGAACCAACAAATACGTC
AACCCCAACGCCTCATCACAACCTAAAGGCTCGGACCAAGAAGAGGAAGT
CGACAGCCCCAACATTTACCTTGACCTGAACGGCCCACCGCGCTACTCTC
GGTCGGAGATGCCTAACGAAGAAGACGATCCGGATCCACTTCTACGGACC
AACAGAGTCAATTCCAACATCTCCTCACAACTATGTGGCGCAGAGATGCC
TCAGAAAGAGATGATTCCGGATCCTCTTCCACGGACTCACACGTACGTTA
ACTCGAACGTCTCCTCACAACAACGCGGCTCACAGGGGACAAATCAGGAG
GAGATTCCAGATCCTCTTCCACGGACTCACACGTACGTTAACTCGAACGT
CTCCTCACAACAACGTGGCTCACAGAGGCCAAATCAGGAGGAGATTCCGG
ATCCGCTTCCACGGACTCACACGTACGTCAACTCCAACGTCTCCTCACAA
CGAGGTGGCTCGCAGAGGCTAAATCAGAAGGAGATTCCGGATCCTCTTCC
ACGGACTCACACGTACATTAACTCCAACATCTCACGATCACAAGATCCGG
AGATTCCCAGACAGATGTCACCATCTGGGGCCTCACCACACGCTCAAGAC
TCGAAACAAGAAGAGGAAGTCGAGGGCCCCAACATTTACCTTGATCTTAA
CGGCCCATCAGGCTTCACTGATACATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00089.0-exon-Sc0000026-1570713199:2195218..2197245Blg00089.0-exon-Sc0000026-1570713199:2195218..2197245Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00089.0Blg00089.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2195218..2197245 -
Properties
Property NameValue
GeneIDBlg00089