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Blg00088.1 (mRNA) - B. lanceolatum

Overview
NameBlg00088.1
Unique NameBlg00088.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1326106..1328033+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00088.1 ID=Blg00088.1|Name=Blg00088.1|organism=Branchiostoma lanceolatum|type=mRNA|length=1928bp|location=Sequence derived from alignment at Sc0000026:1326106..1328033+ (Branchiostoma lanceolatum)
AAAAAGTGTAAGTCAGGAAATGGTCAGGAGAAGCTTTGGGCCGCGGTGTT GCGTGACGTCGTTGGACTGAGCCATCATGTTGGTGGCTAGGGGAGAAATT CAGGTGTGATTTTAATCTCTTTTATATAAAAGAGTCAAACTCCTGCGTTT TTTTTCACCCAAACAAACATGATAAATCTGTCCATGCAGTGGGAGTACAG GCTTGAGGTTTTAAACATCGGTAAATTGTGTTTTGAGTTAATCATTTTTC AGCATTTTACCCAATGTGCATGTGGCAGGCTGATCCGCATAATTTTAATA AGGGCATGTCCCGCCGCATGTTATATGCATAGATTAACGTATTTTTCGTC TGCATTTTACAGGACTACACGTAATTTCCGGTGGTTCCTATATTGACAGG AAAAATGACGGAACAACAACCAGTGGCGCTTACAGCCGAGAAGAACGGTA AGTGTGAAAATAAAACTTGTCTTTAAAAATATTGAGTAATATATTTTATT GTCGGTTTATTGTCTAGAAAGGCTAAAAGTGGCCTTGAACAAGACAGTCT TTCAAACAAGACAGTAGTGGTTTACCGAAGTCTCAACACCAGTGGCGGCT TACTTTACTTAGCGAATGGCTATCGAATAACTACTCTGGGCCGTGCTGCA AAAAATATCAATAATCAAATGTTTGGTGTCTAAACGGACTGTGTCTAATG CGCTCCCATGTAGTAATTCCGTGTTTCAAGTCAATCCACCGACCCGTCAA TAAGTCGAAGTTTACAAATCATTACTTCCGACGGTCTCGTTACTAATGAC GTCCAGTCCACATCATGGTACTGGCGAACGATCAGTCCAGCCCGCAAAAT ATCCTTCCCCGCGCAACCAGTTTTAAAGCCACCACCGCAAACATTTTCAA GAAGGCATCCTTTGTATGCTTGCTATGTTTTTATGCTGTATGCGTTTTTA GTACTTTGGGAAGGTGAAAACTACGGCGCGGTCGATTCTGTAAATCGGTG CCCGCTCTGTATGTCCACACCAACTTGCATGGATTTATGCAAATGTTACA AAGTATCAATATGGCGCCGAACATGTCCTATTTTAGAGTTAGAGGATCTA AAAGCCCCTGGACAGTATGATATATGATTGACTCTTTGCTCTTTGCAGAC CTGCGGAAGACAACCCCGAAATCTCCCCTGACTGTGCCTTGTGAGAAGTG CGGCCACCACACACCTGTCCCTGTGGTCAACGTCTTCAAGAACTACAACA TCACAGAGTGTCAGAATGTCCAGTGTTCGAACAACAACTCCATAAACATC GGAACTACAGAGGACTCTTCCGATTGAACAAGGACCCGCCTGTCGTCTTA GTGGTTTGTTACACTTTGGGCGGAAATTAGAAGTAAAAACTTCAACCGTC AGTGGAATTGTCCGAAGATACAATGTACAGGTCGCTGGGTCCCAACAATC GACATTGTCTAAAAATAAATCGGCAAGCTAGTACATTGTAGTAGTAATAC GAGTAGTGTCTTATTAAGAGTACAATTTCAATTCATATCACTACATTCGT TGCCCGAAGCCTGTATTAAGATGCTGTGACATCGCAATATATGCTATTGA TAAAACAGCGCAATAACCAATATTTACAAAAAATACGTCAAATCAGCGTA GTAGATAAGTTTCGTACAAGGGAGTTGAAATATTTAGAAAAATTAGAATT TGTAGTAATTAAGTACTGTATACGTACCTGGACATTTTATTCAAAATAAG TTATACTGAATACACTTTTGTTTCGCACTATCTACTGTAAGAATAGAAAC ATTGATATGAAAATCCGTCTGAAGACTGTATACAACCTGGTTGACTCGAA CAAACCAGTATCTTAGAAAAAGCACACAATGCAGACAGTTTGATATGTAA TGTCGAACTTTTATTGCTGAGTGGTTAT

Coding sequence (CDS) from alignment at Sc0000026:1326106..1328033+

>Blg00088.1 ID=Blg00088.1|Name=Blg00088.1|organism=Branchiostoma lanceolatum|type=CDS|length=222bp|location=Sequence derived from alignment at Sc0000026:1326106..1328033+ (Branchiostoma lanceolatum)
ATGACGGAACAACAACCAGTGGCGCTTACAGCCGAGAAGAACGACCTGCG
GAAGACAACCCCGAAATCTCCCCTGACTGTGCCTTGTGAGAAGTGCGGCC
ACCACACACCTGTCCCTGTGGTCAACGTCTTCAAGAACTACAACATCACA
GAGTGTCAGAATGTCCAGTGTTCGAACAACAACTCCATAAACATCGGAAC
TACAGAGGACTCTTCCGATTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00088.1-exon-Sc0000026-1570713199:1326106..1326208Blg00088.1-exon-Sc0000026-1570713199:1326106..1326208Branchiostoma lanceolatumexon
Blg00088.1-exon-Sc0000026-1570713199:1326468..1326552Blg00088.1-exon-Sc0000026-1570713199:1326468..1326552Branchiostoma lanceolatumexon
Blg00088.1-exon-Sc0000026-1570713199:1327254..1328033Blg00088.1-exon-Sc0000026-1570713199:1327254..1328033Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00088.1Blg00088.1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1326106..1328033 +
Properties
Property NameValue
GeneIDBlg00088