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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:1163885..1170968+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00087.1 ID=Blg00087.1|Name=Blg00087.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7084bp|location=Sequence derived from alignment at Sc0000026:1163885..1170968+ (Branchiostoma lanceolatum) TGAAAAGACTTGTTTTTTTTTTGTCTGGAAAGTTTGTTGAGCGTAAACCG
TTCAGTCGTAGCGAGGTCACCGCCATGTTGGAATGAGGCGTAATACAATG
CAAGTACCTGTGTACTGTAAAAGTAATCTACAATAGTAAAATAATATTAG
AGTTTGAGCAAACACATTGTATTATCGCTTTAAGATTTTGGTTTCGGAAG
TTCGGACGGAAACTTTGTCACGTAGAGTATTTCACAAAGGGCCGGTTTTC
CGGTGTGAAAGAGTTCAGAGACGGTACGATACTACTACAGTCCAACTTAG
AAATACATTACGTAGGATCAGTGGGATTGAAATTTGAGGAGTCATAACGG
CTTCTTGACTAAAATATGTGAAAGAATAAGGAACAGACACACACCAAAGA
AACAGCTAACAAAACAGAACCCGCTTAGCCGACTACTCATGTAATAAGTA
CTCTTCGGCGCAGAGGTGTTGCGGAAAAAAAACCGTCAAACCGGTTTGTC
TACTCGACTACTACATCAAATGGGCTAAGAGCCTACGATTTCCTGCCCGC
GTTTTCATAACACATGATTTGGGACGTGTTAGTTTGGTGTACTTGCTAAG
AACATGGCGTTTTTGCTGAGAAAAGGACGACAATGTTGGTTTGGTGTCCG
AGGCCTGGCGACTTCCCATAGACCAGGGGTTACAACGGTAACCGACCTTC
CCGACAAGAACACGGAGGTAAGACATTCAATAGCAACGATCTTGTATTGT
GAATGGCATCGTTTGGTGCGTAACATTATCTAATACCAAAATGTAAACTT
TGTTTCCTGAAAATCAATCATACACCCAATACAGTATCAGAAGATTTTTG
CCATATTTGGCTTCGCGGCTTGGACTCATACTGCGATAGTCTGGCATGGT
GTTTATGGTTCAGACTACATACAGCCTCACAAAGACATACACACTCATAG
ACAAACACACGTATTTAGCTAGTATGTATCCCTTGAAAATACAAGTGTTA
AATGACAAAATTCTTGTCAACAGACTTATTGTAAGCAAGTCTGTACATTA
GATGTACTTAAAATGTCAATATGCCAACGTGGCTACTCTTATTTCAATGG
CTACTATATGTCAAAACTTGTCTGGACTAAAACTTTGACGATCAAAAGGC
GTATTTTTCTGTCATTTCGAGAGAAGTGTAGTCTCCGATGAGACGATGAG
AAATAATTGAGTATTGTGGCCGCTTTTTTGTTGTTGATAGACTTCTTTCG
CAATCTCGTTACTACTAGTACCTTATTTGCAGCCTCATGTAGCGACGTGA
ACCGGGAAAGCTCACACAGACTTGTAGATTAATTACAATCAGCGCAGGTC
TGCCTCATTTGAATTCTAAACGAGCTAAAACATGATTAGAATAGCTCAGC
GCGTTTTGAATACCAGCTTTTTTGGGGGAGGGCGACATAATTTAGAAGGC
AACGTCGCCACTATATTTAGCCAGTTTGACACTTAACGTTCAAGAGATAT
TTATGTTTGTTTGTCCGTTCATTATCTTCGCCGAGTACTATAGTACTCGG
GGTAGATTATGTTTTCGGTTGAGCCAGCTGTTTGGTGGGTCTGTATGTAT
GTCAAGAGCATAACTCAAGAAACCTTTGATGAATCTTTATGATTTTTGGT
AGGTGTGTAGTGGTTGTGCAAAGGAAGGTCAAGTTCAAAAATGGTTTACC
TTGCGTTTTTCAACAGTACTGCAGCGGACTTTTAATTTTTGTGCGTTTGT
ATGTAGGCGAAAAAAGTGACGGAAACGTTGATGGATCTTCATGATTTTTT
GCAGGTGTGTAGATGTTGTGAAAATAGAGATCAAGTTCAAAAATGGTTCT
CCTGGCATTTTCCGTCGGTACTGCAGCGGGCTTTGTGTGGATGTGTAATT
CTTGTGGAAAACATAACTCAAGAAGCTGTTGATCGATCTGTATGATAGTT
AATGGATGGGTAGGGTTTACGAAAAGGAAGGTCAAGTTCGATAATGGGCC
TTCTAGCAAGTACCTAAGGTACTGCAGCGGAGCTTCAAAATTTAGTGGCA
TATTTTCTGAAAGTGCTATGGTCATGATATTTGTGTGGTAGATAGTTCAT
GCCACAAGAAGTAAGTTCTGTAAGTTTGGGCCCCCTAGCGGCTTGTTTAG
AACTGCAGTGGGTGTTTTTGTTTTGACATTCGGACACGTATTACTTGAGA
AGGGGTGAAGAGATTGTCGTGAAGTTTTGTATGTAGAGAGCTCAGATGGT
GCTTTACACAATCGATGTCTAATTATAGAAAACAGGAGCTAATCTGCATA
ATTAGTAAGGATAATTGTAAATCCATTACATTCCATAATGGGGCGTGTGA
CAGTGTTCCCGAAACAGGCCAGCAGAAGGCTTTGCCCAGAAGTGTAAATA
AACAGATGGTGTACATAAATAAACAAATTGGGTAGTCTCACTACAATTCA
AGCAGATGTGTGGGTCCGGTTTTTTTAAAGTGTTCAGTTTCTGCATTTTT
GTCAAACACACGGTTGGAGACATAACGGAAAGGGAACAAAATAGAAAGCC
TTACAAAACACCTAAAAACATGTGAATAACCAGCCGGACCAACTCCTCTG
CTCAGAGAGTACACTGCTAGGTATTACCTAGCACAGTATGGAAAAGTAAC
ATGTACTATGTCTTGCAAAATGTGTATGATATGGAGTAAAGATTTATTCT
ATTCATATATATTGACTGTACCATCTAATTATAACTTTCAATTTTTTTGA
TGACCAGTTATAACATATATCAGCACACTATACACATATACTAGTCCTGT
ACCACCAAATGAGTTTTATCCCTATCTAGACTGGACTCATTCTCCCCCCC
CCCCTCATAACTTTCAAACGGTATGGTGTATGATCAAGTTTGCAGGGGGT
GATAAGCATGTAAATATTAATCACTCTCCACAATAAGCCTTGATTATTTG
GCGAAGATAATGTGTTCGTGGAACTCTAGTTTAGTCTTTCATTCATCTGC
CGGAAATAAAGGTAGATAACGAAAATACGCAAGTAACTTTATTCATTCAT
TCATTCATCCTTCCATTCAATATTTTCAGCGACTGGAAGAGAAGACAAAA
ATCGAAAAAGCAACTTCAGTCGACAGAGGTCAGTTTAACGTGCGAGTGGT
CACCAAACACATCGAAGTACAGTCCACGGGCGACCGCACTCCTCTAACTG
ACGACAGACCGCTCGTCCTGCTCTTCTCCTGGCTGTACGCTAGCAGGAAA
GTGCTGGACAAACACCGCGTCTTGTACCACCGGCGGGGGTACGACGTCCT
GACGGTGAGAGGGGACCCTCGCTACGCCTTCTCACCGACTGGGTTCGCGA
AGAACATTGCCGTAGACGCCCTGAAGTTCCTGAAGGCTGAAGCCAATCCG
AAACAGCCGTTGCTTTTGCACACGGTGTCTGTAGGGTGGGCTCCGTACGT
CATGCTGCTGAAAAACGCACGAGATGATGCAGAATATGGCGACGTTCTGG
GCAGGGTTGTCGGGCAGGTGTTGGACGCTCCGATCGGAGACACGAGGGGA
TGTGCAGTCGGAGTCGGGAAGTCCATCAACAATCCCGTCGGTAGGCTGCT
GTACACCGCCGGGATCTGGAGCTTCTTCACGTTCGTACCGGGAGTGCTGA
AATCACACGATTTTGTAGGCAACATTTCATTTCACTATTTGTTTATTTGT
TTTTGTTTTTGTTAAACAATGTACATGTACTGTTGTACAGCCAGTGTTGC
TTAACTACGACAACCTCATGCAATGTATGCCAAAAGTATTAACAAAGCCC
TGTACGCACATGTCCTAGGCAGTCCCGTGCCACATTTGGTATGGTACTAG
TAGACCTGAACCAGAAATGCAAGCTAAATTGATTAACTCAATTGGGCAAT
CAGATGCTCGCAGTTTGAAATCTAAAAAAAGGCACTTCCAACACTGTATA
TGGCATTGGAAGTGCCAGAAGTGGCAAAATATTTCCCCAAAAAATCAAAA
TAAATCGTTTTGAAGAGGTTTATGCCAAAAATTGGAATGTAGTCCTTTAA
ATATTTGTTTAAGGCAAATTTCAGGTCATCCAGTTGAAATACCAGGGCGC
AGGAGGCCGAGATGTACATTTTTGGTCTAGAAATAGCCCCAAAACGCAAT
AAAATCAGTTTAAAGGTATATATCGAGAAAAAAATGAAGAAAAAACAAAC
ATCCAGGGGGTATTTGCCTACCCTACCTTTGTGCCAAATTTCAGGTCATT
TAGCCAAAAAATGACAAATATGAATCGATTTGACGATTTGACACGAGGAG
GAGGAGAAGAAACATGAAAGAAAACAATGTGTTTAGCCCATACCTATAGT
ACGGGCGAAACATAACAATCAATATCATAGGTAAGCAATCAATATGTTAC
TAGCCAATCTTTTGCGTCATTCATTCAGTTAATCTGTTTTTTTTCACCCG
TTTATTTTACTTGAATGGGTCTTTGTGTGTAACAAATTTGTTTTAAAAAT
GTAAACGTGTTGCTATAGTTAAAAATCAAAAAAATGTTATTAGACAATTT
TGTGACGTTGAGCATCATTTTTATAAAAGATTGTCTCGTATAGCGTAAGT
TGCACAATGCCTGCCACTAGTCATAAAATACATTGACTTCTACAACCTCA
TAGTGAGAATATATAATTGCAGACATGTTTTCATGACGGCATTTTTTTCT
TAACCCCGCCAGACACGCTCGTATTGGGAAACACAGATTCTGAAGACTCC
GATTCTGTTGTACGGTTGCCATAACGACCCGATGTCTACCAAAGAGTACA
ACGAGCGCTGCGTCGAGGGCTGGCGGAAACTGGGCTGCGACGTCCGGCTG
CAGTTCTGGGACAACTCCTCCCACTCCAACCACATGAGGGTTCACAGAGA
AGAGTACGTCACCGCCTTAGACAACTACCTGGACACTTTAAAACTGTGAA
TGTAGTTTCTGACTGCAGTACTGCTTCTCACCGCTATAAGTAGCCGATGT
CGGTGGCGCTTTNGTAGGTGGCGCTTTTGCGGCGAAAACGTAATCAAACG
TAAATGTAGTGTTTGTCAAACATGCACTGGTGATGTCCACCTCCGCACGA
AGACCTCGTGGACATATTAAATTTAAAGTTTATTGCAAGTTCTTTTGTTT
TTGAGTCTGTACTCGCTTGGTGTGAGTATTATTTGTGCAAATGTCAACCA
ACTGATGTTTTTGTTTATGTATACGTAGAGCTGGTGTAAGTTGTTTATCG
TACCCAAGAATGTTATTGTGCTCTTGTATGTGTAAGGATGATGTTTTTGT
AAACCTGGCGTTTTCTATATGAGAATGTTGTAATCTCTTTGTTTTGCAAG
GCTGGTGTTGTAACAGTAAGTATTGTAGCCTGATTTTGTGTATTTGTAAA
TTTGTAACGTTTGTCTTTTTGAGTGTTTCCCTGAGGCTTGTTTTTGTTGT
TGTGATTTATGGTATTTATGTATTTGTACTGATGCATGAATCTTTGTATA
TGTTTCTGTTGTTTGTTTATATACGCTTGTTCTCACATCTTTTTTTTCCA
TATGATGTAATTGGCTGATATGATGTTAATGTAGTTTTTGTTTTATATTA
TTTTGCGCCTGTATAGCGGTTATTGTGCGTTGATGAAGGTTAGACATCCA
GGTAATAAGATACGCCAAAAATAATTACTCAAGCAACTGGATAAGATTTT
GAAACAGTCAGACGTTTCAGACAGTATCCACTGTCACGTCACTGACGAAA
GACAGTGGATACTGTCTGAAACGTCTGACTGTTTCAAAATCTTATCCAGT
TGCTTGAGTAATTATTTTTGGAGCGGTTATTGTGATTTGAATGTGTAAAG
CGTGTAATGTTTTGCATTATGTTTCATTTATAAATGTATTTTGTAATTTT
TTTGTAAAATTTGTAATAAAAGCAAACAATTGGTAAGTCTTATATTCAAA
ACACAGGGAAGGAAAACCCTGCACAGAAACCCAGGGATGACATCCCTGCA
CAAAAGTCCTAGGGAAGAAACCCTAGCACAGAAAATCCAGGGGGGATGAA
ACACCCCTGTCAAAAAAGTCCTAGGGAGCACACCCNNNNNNNNNNNNNNN
NNNNNNNGGGGGGGGGGGTGAAACACCCCTGTCAAAAAGTCCTTAGGAGC
ACACCCTAGCAAGAAAAGCCAGTGGGAATGACCCCTGTAGATATATGTAA
CTAGGGAGCACACCCTAGCGCGAAAAAGCCAGTGGGAATGGCCCCTGCAA
TAATATGTAACTGTGTTTATTTGTGGAGTTGTAAATGTGCAATGTTAACA
TGTTGGTATGTTATGTATTTATGTATGTTCGAATACAAAAAAAAAATTAC
AAGTTCTTGCCCGTACGTAGGCTAATTGCAAGTACATATAACATGAAAGG
ACGGACAGACAATTGGGTAACAATAGAACTTGTGACTATTCTAGTCTAAA
TACTAACACTAAATTCTAGCTTATTTTGGTTTGACTTCTTTTTCCAAGAC
AGTGGTAGACGTCGAATGATCATACTTTTTTTTGTATGGTCAGGTTTGTG
ATGTTAAGAGGAGAGTATACGTAGTTTTCTTTTTGCCTGTAAACTTCGAG
AAATTAGGGTGGAATTTGGTGGCTTCTTTAAACGGCTCCTTTCTTTACTG
ATCGTAGAAAGAGCAATTTGAAAAAGAATGTGTTTCGTCTTCCACCGTGT
TTGACATGCAGTATTTACAAGTTCTTTCGCACTCAAGAAAGTTCTTGTAC
CGCCCTTTCTCTGTTTCAAGGGGATTGGCACTAATTCTATTTTGCTTATT
GCTGGGCGTAAACGAAAATCATGTAGTTCTAGATATTTTTCCATGAAATG
TGATGTTTCCAATGCCTTATAAAACCTTAGCTTTCTTATATCCATACTCA
GGTTATGACAGTTTGGATATATATATCGGTAATGATATAATGACATGTAG
GTGTCCAGTCAAACCTTTACTAGTGAGCATATTTGCATAAAGTCCACGTT
TTTATGGTCTCGTATATTATTTTCCCTTTGATTAAAGTATTGGTCTCACC
ATGCCTAATATATTCCAAAGTCAAGTTCTTATTT Coding sequence (CDS) from alignment at Sc0000026:1163885..1170968+ >Blg00087.1 ID=Blg00087.1|Name=Blg00087.1|organism=Branchiostoma lanceolatum|type=CDS|length=750bp|location=Sequence derived from alignment at Sc0000026:1163885..1170968+ (Branchiostoma lanceolatum) ATGGCGTTTTTGCTGAGAAAAGGACGACAATGTTGGTTTGGTGTCCGAGG CCTGGCGACTTCCCATAGACCAGGGGTTACAACGGTAACCGACCTTCCCG ACAAGAACACGGAGCGACTGGAAGAGAAGACAAAAATCGAAAAAGCAACT TCAGTCGACAGAGGTCAGTTTAACGTGCGAGTGGTCACCAAACACATCGA AGTACAGTCCACGGGCGACCGCACTCCTCTAACTGACGACAGACCGCTCG TCCTGCTCTTCTCCTGGCTGTACGCTAGCAGGAAAGTGCTGGACAAACAC CGCGTCTTGTACCACCGGCGGGGGTACGACGTCCTGACGGTGAGAGGGGA CCCTCGCTACGCCTTCTCACCGACTGGGTTCGCGAAGAACATTGCCGTAG ACGCCCTGAAGTTCCTGAAGGCTGAAGCCAATCCGAAACAGCCGTTGCTT TTGCACACGGTGTCTGTAGGGTGGGCTCCGTACGTCATGCTGCTGAAAAA CGCACGAGATGATGCAGAATATGGCGACGTTCTGGGCAGGGTTGTCGGGC AGGTGTTGGACGCTCCGATCGGAGACACGAGGGGATGTGCAGTCGGAGTC GGGAAGTCCATCAACAATCCCGTCGGTAGGCTGCTGTACACCGCCGGGAT CTGGAGCTTCTTCACGTTCGTACCGGGAGTGCTGAAATCACACGATTTTG TAGGCAACATTTCATTTCACTATTTGTTTATTTGTTTTTGTTTTTGTTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00087.1-exon-Sc0000026-1570713199:1163885..1164601 | Blg00087.1-exon-Sc0000026-1570713199:1163885..1164601 | Branchiostoma lanceolatum | exon |
Blg00087.1-exon-Sc0000026-1570713199:1166964..1169535 | Blg00087.1-exon-Sc0000026-1570713199:1166964..1169535 | Branchiostoma lanceolatum | exon |
Blg00087.1-exon-Sc0000026-1570713199:1169684..1170968 | Blg00087.1-exon-Sc0000026-1570713199:1169684..1170968 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000026 | genome | Sc0000026:1163885..1170968 + |
Properties
Property Name | Value |
GeneID | Blg00087 |
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