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Blg00086.0 (mRNA) - B. lanceolatum

Overview
NameBlg00086.0
Unique NameBlg00086.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1040906..1043163+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00086.0 ID=Blg00086.0|Name=Blg00086.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2258bp|location=Sequence derived from alignment at Sc0000026:1040906..1043163+ (Branchiostoma lanceolatum)
CACCTGTTCAAAAATCTGCTGGGGCAACTGAAGCCTGCGACATGCGGCCC ATTTCTCTCTTGTCTGTGCTAGCCAAGATGTTGGAACGTTGCATCCTGAA GAGACTTCTCCCTTCCCTACATGCCGTCATAAAAGACCAGTACGCGTACA TGAGGGGCTCCTCGACAACCATCGCTCTTGTACGCATGATACAAACCTGG CTAACAGCGTTGGATTCCAAGAAGCCAACCGTCATCAGAGCTCTGTTTGC CGACATGTCGAAAGCCTTCGATCGTGTCGACCATGCTATCCTACTACAGC ATGTGATCGATATCCAGGCTAGTCCACGCATGGTAACCTGGATTCACAGT TACCTTAGCGGTCGGCGTCAGAGGGTGGTAGGCAGAGGTGTGGTCAGCTC CTGGAAGGAGCCAACATCAGGTGTATCACAAGGTGATGTTCTGTCCCCGT ACCTTTTTCTGCTCTTTATGAGCTCAAGAACACCACTACGTCTCGACACC ATGAACGTGGGCTATGCGGACGATCTCTCCATGTCTAGAACCCTTTCTGT GCTTCTAGCCAACGAAGACAAAACACTTGAGGAAGAGACTTCTCACCTTG ATACGTGGGCAAATTCCAACAACATGTTGCTAAATGGAAAGAAAAGTCAA CTGTTACAAATCTGTCTGTGCAGATCTGTTCCCAGCCCACCAAGGCTAAC CCTTGGGGGTGTATGCGTTCCGTGGGTAGACTCTGCAAAAGGTCTCGGTT TCATCATTGACAAGGGCCTTACACTTCAAGAACAAGTCACCTCTACCGTG ACAAAAGCGTCACGCAGACTGCACTACCTGAGGCTTCTGTCCAAGCAAGG GACCAGTGTTTCGGACTTAGTCCTAGTTTACCTGTCCCTTGTACGCCCAG TGCTTGAATACGGGCATGTCCTCCTTGTTGGGTGTAGCAAGGAACAGGAA CACCAACTAGAGCGAGTCCAACGGCGAGCCCTTCGTATCATCAGCCGAGC AGGCCGGCGTGATGTGCCTGAACTACCCACCCTCAAGTCCAGGCGCGAGG ATGCCGCTGTCAAACTCTTCAAACAAATGCTCAAAGATGACCACCCCCTA CACGATCTCGTCCCCCCCTGTAGATCCGCAGCCACTGGTCGGTCACTCAG GAACAAACATAATATCTCCATCCCCCCAGCTAGAACCAAAAGACTACAGG ACTCTTTCCTACATAAGGCAATCAGTTTGTACAATAATGAATGAATGAAT GAATGAATGAATGAAGACCTTTATTGTACACACATACCCACTGGGTTTAG TACAGGTCACAACAGAAAACATAACAGTTTGAAAGTACATATATATACAT TACAATGATAAGCTAACACTAATCTAATGATTACGTTAATTTGGCCTCTT CTCGCTTCTTGGTGATATTGTAAATATACGTACAGGTGTGTTTTATAATA GAGGGTTTACCTAAAGTCATTAGAAATATGAATTGCTCCTCTTTGCAAAG ATGTATAAAATGGGGAAAGCTACATTGAATAAGTTTATAAAGCGCAGCTC TCTCTTCGTTGTATAAACTACATTCTACTAAAAAGTGCTGCTCGTCTTCT ATCCTATTTAAATTGCAATGTCTACATATACGTTGTTCTAGGGGAGTGCG GTTATGACGTCCGGTTTCAATGTGAAGTCTGTGACAGCTGATACGGAGTT TTGTGACTGCGGTCCTATGCCGTATATTTTCGAGGCTTAGATACTTTTCT TCGTTATATGTGGACTTGAACAATCTGTAGGATCTCAGTTTGTTTCGAGC TGATCCACCTTTGTTATCATTGTGTATTTCTTTTAGGAAAGTTTGAAAGT GAATATCTTTTAAGCGTTGATTGATGGAATTAATGATTTGGGACGTATCT GTGTTTGGGGATAAAGAGCAATGCCAGATGTAGCCGAAACCGCACTCCTC TAGGGACTTCCGAACTCCTGACGCCCAACATTTGGCTCCAGTTTTGTCTA AGTCTATCTGACAAGCGAGAGCATCTAACTGAAAACTGTCGGCAGGCACT TTCAGACGAAGTCTTAAAAGATGTTTGATGGCGTTTAGGGAGGCCTCCAC TTGAATGGGAAACCTACCTAGTTCTGCCCTTGCAGCGAGGCCGCATGCCG ATCTCGGTACGTGCAGGGCTTGTTTACAGAATTTTAGGTGAATGGATTCG ATAGGGCAGGATTTGGAGCTTTTAACTGAACCCCAGATCTCCGACCCGTA AAGAATTA

Coding sequence (CDS) from alignment at Sc0000026:1040906..1043163+

>Blg00086.0 ID=Blg00086.0|Name=Blg00086.0|organism=Branchiostoma lanceolatum|type=CDS|length=1203bp|location=Sequence derived from alignment at Sc0000026:1040906..1043163+ (Branchiostoma lanceolatum)
ATGCGGCCCATTTCTCTCTTGTCTGTGCTAGCCAAGATGTTGGAACGTTG
CATCCTGAAGAGACTTCTCCCTTCCCTACATGCCGTCATAAAAGACCAGT
ACGCGTACATGAGGGGCTCCTCGACAACCATCGCTCTTGTACGCATGATA
CAAACCTGGCTAACAGCGTTGGATTCCAAGAAGCCAACCGTCATCAGAGC
TCTGTTTGCCGACATGTCGAAAGCCTTCGATCGTGTCGACCATGCTATCC
TACTACAGCATGTGATCGATATCCAGGCTAGTCCACGCATGGTAACCTGG
ATTCACAGTTACCTTAGCGGTCGGCGTCAGAGGGTGGTAGGCAGAGGTGT
GGTCAGCTCCTGGAAGGAGCCAACATCAGGTGTATCACAAGGTGATGTTC
TGTCCCCGTACCTTTTTCTGCTCTTTATGAGCTCAAGAACACCACTACGT
CTCGACACCATGAACGTGGGCTATGCGGACGATCTCTCCATGTCTAGAAC
CCTTTCTGTGCTTCTAGCCAACGAAGACAAAACACTTGAGGAAGAGACTT
CTCACCTTGATACGTGGGCAAATTCCAACAACATGTTGCTAAATGGAAAG
AAAAGTCAACTGTTACAAATCTGTCTGTGCAGATCTGTTCCCAGCCCACC
AAGGCTAACCCTTGGGGGTGTATGCGTTCCGTGGGTAGACTCTGCAAAAG
GTCTCGGTTTCATCATTGACAAGGGCCTTACACTTCAAGAACAAGTCACC
TCTACCGTGACAAAAGCGTCACGCAGACTGCACTACCTGAGGCTTCTGTC
CAAGCAAGGGACCAGTGTTTCGGACTTAGTCCTAGTTTACCTGTCCCTTG
TACGCCCAGTGCTTGAATACGGGCATGTCCTCCTTGTTGGGTGTAGCAAG
GAACAGGAACACCAACTAGAGCGAGTCCAACGGCGAGCCCTTCGTATCAT
CAGCCGAGCAGGCCGGCGTGATGTGCCTGAACTACCCACCCTCAAGTCCA
GGCGCGAGGATGCCGCTGTCAAACTCTTCAAACAAATGCTCAAAGATGAC
CACCCCCTACACGATCTCGTCCCCCCCTGTAGATCCGCAGCCACTGGTCG
GTCACTCAGGAACAAACATAATATCTCCATCCCCCCAGCTAGAACCAAAA
GACTACAGGACTCTTTCCTACATAAGGCAATCAGTTTGTACAATAATGAA
TGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00086.0-exon-Sc0000026-1570713199:1040906..1043163Blg00086.0-exon-Sc0000026-1570713199:1040906..1043163Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00086.0Blg00086.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1040906..1043163 +
Properties
Property NameValue
GeneIDBlg00086