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Blg00084.0 (mRNA) - B. lanceolatum

Overview
NameBlg00084.0
Unique NameBlg00084.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1085606..1088264-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00084.0 ID=Blg00084.0|Name=Blg00084.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2659bp|location=Sequence derived from alignment at Sc0000026:1085606..1088264- (Branchiostoma lanceolatum)
ATGGCTGTAGCTCCTGTAGTAAGTGTAGCAGCATAAATTCCAACTACACC TGCTACCGACCGGCTGTAGTTCGCTGTAGTTGATGTCGTAACATGTGGTC AGAGGGCAATAAGAACCCAACTACAAGATTTGGGGCTGTAGCTTCTGTAG TAAGTGTAGCAGCACAAATCCCAACTACACCTGCTTCAGACCGGCTGTAG TTCGCTGTAGTTAATGTAGTACCATGTACTCAGAGGGCAAGCCAACCCAA CTACAAGATTTGTTGCTGTAGCTCCTGTAGTAAGTGTAGCAGCAGAAATC CCAACTACACCTGCTACAGTCCGGCTGTAGTTCGCTGTAGTTGATGTATA CCATGTACTCAGAGGGCAAGAGGAACCCAACTACAAGATTTTGGGCTGTA GCTCCTGTAGTAAGTGTAGCAGCACAAATCCGAACTACACCTACTACAGA CCGGCTGTAGTTCGCTGTAGTTAATGTAGTACCATGTACTCAGAGCGCAA GAAGAATCCAACTACAAGATTTGTTGCTGTAGCTACTGTAGTAAGTGTAG CAGCACAAAGGTTGCAAGACTTTGATGTTGCTGTTTCCAGTGCAGTCGAC TTGTAAACACAAGTTATTCTTTCTTTACTTTTACGGCACTTATATACTTT CCGGGTATTGTCAAAGAATACCCGGAGAAACAAACTACGTAAAGACGGAC TAAATAAGTAAAGGCTATCTTAGTTTTTCGGTTACTAGTACGTAAATCCA GCGGTGCGGGTCCGTCGTGCGTTTTGTGGAACGGGCGTTGACGATAACCA CAGCTAACTTGTACGTTCTTTTTTTTGGAATTAAACCGATGCCACAGATG GGGGGACCTCGCGCCATTTATGAAAAATACTATAACGGCATCAAAATTGA TCATAAAAAGATAAGGCCCCCTCTCACTGAGCTGCGGCACTGCGGCGGCA CTGCCACGGCAGATTTTTACGGCACCGCCGCGTTTTGTTTTACAATTTTC ATTTGCACTCTCACTGACGTGCGGTGCATTTGCGTTAGAAGCACAGATGA GGGTCTGCATGCCCTTTTTCGTGAAGCGTTACGAGCGATTTTAATTCACC GTTAATCGTTACCGGCCGCCCTGAATTTACCGTTAAGCGTTATCGGTATA TTAATCGTGAAGCGTTACTGGTCATTTTAATTCCTCGTTAAGCGTTATTT GTCATCCTGAATTCAACGTTAAGCGTTATTGAGTAATTCCTCGTTACGCA GGAAAAAGCATTTCAGTGGGTCAAGATTTCAAAATTTTCTCCAGGGAGCA CACGGCTCCGGCGAAAATATGCCCCCCACAAAATTACAAGCTGAAACTCT TCTATTTTTCACTCTACCAGCAAAGTTTTCTCCTCAAAATTCAGGACATT AAGCATTTCGCGGTTCAAGATTTTAAAATTTTCCCCGGGTCCATGCACAG GATAATTGCAGCTATATACTTGTATGTTTTTCTAATGGGGCTTTTTAACT GTACAAGGCTAGGGTGAGAGACAATAAAAGTAAGAAACACCTGTCCTTCC ACCCATCCATCCACATATGTGGTAAATTCTGATAAAGAAGAAACACACAA TTGAAGACCTTTTGTTCCATGATTCCTTTAGCTGCCGTTTGAGGAGCACT CGGTGGTGTGGCTGGCGCAGGTGAAGGGCAGCGTCTTGTACCGGCTGGAA CCGGATCCCATCTGCGAAACCACCTGCAAACCCATCGACGTCACGCTCAA ACCAGGGGAAACATGTACGTACTCACTGTTACACTAACACGTGTGTGTGT GTGGTTCTGTGTGTTTGTGAAACCACCTGCAACCCCATCGACGTCACGCT CAAACCAGGGGAAACATGTACGTACTCACTGTTACACTAACACATGTGTG TGTGTGGTTCTGTGTTTGTGAAACCACCTGCAAACCCATTGAGGTCACTC TCAAACTAGGGGAAACATGTACGTATACACTATTTCTGATACAAACCGGC TCGTATTCTGTTTGTAAAAGCACCTGCAAACCAATCGACGTCACGCTCAA ACCATCTCAAATCATTTTCTTTAGTTTACCTCAATGAAAAATGGAGGTAT GGTGTGTATCTGTGTGTGTGTTTGTCTGTTTGTCTGTGAGGCCACCTGCA AACCCATTGACGTCACGCTTAAACCAGGGGAAACATGTACGTATGCACTT GTTTAGTTTACCTCCATGTAAAATGGAGATTTTGCTCTGAGTTTTTGTGC GTACATGTGGGTGTGTGTGTGTGTGTGTGTGTATCTGTGAAGCTACCTGC AAAGCCATTGACGCCCGCTCAAACCAGGAGAAACGCATACCTACCAACTT GTTTGGTTTACCTCCATGAAAATGAAGGTATTGTTTTGTGTCTCTGTCTG TGTCTATCTGTTAAGCCACCTGCAACCCCATTGACATCGTGCAGCCACAT ATTTTTCAAAGATGTAAAAAAATAGACAATTTTGATGAAGCGAAAGCCTA AATGCTGACTTTGTAAATGACCTTGAACCTGACCTCATGGCCCCCCTCCC CCGTTGTTCTACAGTGGTCGTGCCCCAGGACCTGTGGACTATCCAGCTCA AGAACAGCAAGGACTCCGAACCAGCCGTGGTTGTCGCGGCAACAGGCACC TGGGATTAG

Coding sequence (CDS) from alignment at Sc0000026:1085606..1088264-

>Blg00084.0 ID=Blg00084.0|Name=Blg00084.0|organism=Branchiostoma lanceolatum|type=CDS|length=246bp|location=Sequence derived from alignment at Sc0000026:1085606..1088264- (Branchiostoma lanceolatum)
ATGGCTGTAGCTCCTGTACTGCCGTTTGAGGAGCACTCGGTGGTGTGGCT
GGCGCAGGTGAAGGGCAGCGTCTTGTACCGGCTGGAACCGGATCCCATCT
GCGAAACCACCTGCAAACCCATCGACGTCACGCTCAAACCAGGGGAAACA
TTGGTCGTGCCCCAGGACCTGTGGACTATCCAGCTCAAGAACAGCAAGGA
CTCCGAACCAGCCGTGGTTGTCGCGGCAACAGGCACCTGGGATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00084.0Blg00084.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00084.0-exon-Sc0000026-1570713199:1088247..1088264Blg00084.0-exon-Sc0000026-1570713199:1088247..1088264Branchiostoma lanceolatumexon
Blg00084.0-exon-Sc0000026-1570713199:1086501..1086633Blg00084.0-exon-Sc0000026-1570713199:1086501..1086633Branchiostoma lanceolatumexon
Blg00084.0-exon-Sc0000026-1570713199:1085606..1085700Blg00084.0-exon-Sc0000026-1570713199:1085606..1085700Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1085606..1088264 -
Properties
Property NameValue
GeneIDBlg00084