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Blg00082.0 (mRNA) - B. lanceolatum

Overview
NameBlg00082.0
Unique NameBlg00082.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1390917..1397466-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00082.0 ID=Blg00082.0|Name=Blg00082.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6550bp|location=Sequence derived from alignment at Sc0000026:1390917..1397466- (Branchiostoma lanceolatum)
GGTGTGGCCACACCTCAGACCACTGTGACTATCATGGTATTATCAACTAT AGGAACCCAGGTACGAATTTACATGTTTGCGTAGCAAAACCTTTGATGGA TCCGTTGGCAAGTGTGGTGGCCGCCATCTTGAATTGTGACGACACAAGGT CGCCATAACATTTTATTGGGAGGGGTGATTTTTGGGGGTCGCTAGCTTTC TATTTCTAACAAATCGGCACACAACTATCACACATTCAACTCAAATGAAA AGAAAAATTCAATACCAATTCATATTTATAAAAAGACCCCGTAATCGCTT AACTAACATACTAGCAAACCTGAAGTATATGTAGCACAAATACTTCACTC TAGTTGCAAAGTAGACTCATCCCAAAAATTTTGAAAACCTAAAATTTGTT CAATCCTATCTCCGTCATTGCCCAAACAATTGAATATTACTATGAATCAT TAAAAAGCATATTCATTCATTACCTTTTTGATATGAATGAATGTGTCACC AAATAAGAATGACAAAATTTCTGAGCAAACGCAGTGTCTGACGTTGCAAG GGGAATTTCGATATTTTTTTGGGGTGACCCGCCACAAAATCAGTCATGGT TCTTAATGCACAAATGCCTAATCATAACAAACTAGGCATCATTTTCAAGA AAAATACACAAGCTTTCCAGTGATATGACGCATTCTGATAATCATTTCAA AACAACTGACATTTTGAAGCATTTCCAACGGACGCAATAGCGTTGTTTCT AAAAAAAATGTTGCTACTACAATGCGTTTCTTAAACATGTTTTTGTACAA AATTTATTTTCTTTCGAAGGATAATATTTCTATACAAAAAATTAATTTTT ACAATAGGATTTTCTAAATTTGTAAAAGACAAAAGTTAAGTTGTTTCTTT CCAGGCAAACAATAAAAACAATTATCAATAAAAACGACAAATGCATAAGT TAAGAAGAAAACTAACTGGAGGGCATTGACATAATATATTCAGATCTATA TTCTTATGAGAACATTAACAATAGGTGTCTACAAATTATGATATTCTATC GGTTCTTATTGCTTGTTTAACTATGCCTAGCAAAGTTGTATTTCCTGAAG AAACTAATTACAGTCTTTTACTTTTCTGTTATCAATTATGTGAAAATCCG ATGAAGAATGCCTGGTGAAACCTAGCAAGCGACATGTCTGTGGCTTTGAA GGCATTACTTCAGAGGAGTGTCATCAAAGGGGCTGCTGCTTTGATGATAG ACTTTCTCATTCACATTGGTGCTTTTACAAGAAAGGTGAGTCGTAGGCGT GTTCTTAGTCGTAATTAGGCTGCAATGTGGGGTCGTGTGGCGTAACAGCA GGGTGTTTGGCCCAGAACCAAGAGGTCCCGAGTTCGAATCCCCCTGACGC CACCCATGTTGTGCCCTTGGGAAAGGCACTTGACACGACTTTCCTCACTC CGCCCAGGTGTATAAAATGGGTATGTTGTTATCTGTACGTGGCACTGTTA ATATAAGTTATACAAACTTGCAATTGAGTGCAGTGTCGTCCTTGTCTGTC AAAAACTGAAGTAAAGAAAAATAGTATGCTGCACAATTGTGCACAAAACG TTTGAAAACTATTTTAGAGTCCATTCCAAGTCACCGCAAGGGTTTTTATT GTCGTAATTATCTTCGCCGAGAAGATTATGTTTTCGGTTACGCCAGCTGT GGGGGTGGATCTGTATGTATGTCCTGATTTTAACTTAAGAAACCTTTGAT GAATCTTCATGATTTTTGGTAGGTGTGTAGTGGCTGTACAAAGGAAGGTC AAGTTCGAAAATCGTTTATCTTGCATTTTCCAACGTTGCTGAAGTAGACT TTGCATGTTTGTGTGTTTGTATGAAGGTATAAAATGTGACGGAGACGTTA TTTAGATATATTTTTAATTCATTTTAATTATTTGTGAAAGAGATTTGATA CTTTTAGAATATTTTCAATGTGATTTCAACTTCAGAAATATTTTTATCTT TTTAAATTTTACAAATATTTATGATGTAGAATTTTATATTTACAATAGTT TCTGAATAATAGTAACAGCATTCTACCATTATTCAACATTTGCTACCTTT TCTTACCATTTTTTACCATTATTTGTAACATCTTTATAAATAGGTTTAGA AAGCTGGGAAGAAAGCAATTCACATGCACAAGTCCTTGCGATGTATAGGG AATAATATATCCCATGAAGGGCCAAGCAGTGTCCTGCATTTAAATCTAAA GATGTACAAAAGCAGACAGAGGGGCTGGATTAGCACCTACTTTTATGGGG GCAATCACCATTCTACCATTGTTAACCATCTTCTGCCATTTTTTGTAAAT ATTTCTTTAAGTGGAAGAATCACGTAGAAATTCTTCTAAATAAAGAGATT TTTGTTACTTTCAAATATTTCTAAATCATCTAATTGAATTTGAATACATT CGTATTTTTATATTTAATCTTTTAGAAAAATGCAGAGCTATTGTCAGTCA GATTATTAGAATTTTTTCAAAATCATAACAAATATTATCATAAAACCCTC TTGGTGGCTTGGGATGGACTCTACATTAATACCATATTTGTTATTATCCT ACATTTGAACACTAGAGTTGACATAGCTTGGTATCTTAACCTATCATAGC TCCCAAATCTCCTCTCCGCAAATTCGGAGTTGACTATGCGAATTGGCAGA AAACAAAAGTGCAGAAATTATCCTGTCAACACTGTGTATAATGTTGTCAG GGACATTTTGGCACTATAGCTTGCTAATAAACTCACATAATTAAATTTTG CAAAAATGGAATAATAACAAATCTATACTTTCAAAGAGAAATATTTTTTT CAATGATAATGTCTCTTTCTCCCCCTCCTCACATAGCCAATACCTGACCA ATGTTTGTTACTATTGAAGCTAGTACAATATTTCATCCTATTTCGACTAG GTATTAAGTAGGTTGTAAAGTAGGTTGTCCAAAAGGTATCCGATCAATGA TATAAAAATGCTTCAGATGTAACCTCCAAAATAGATGAAATCTTTTAAGT TTTATCGAATTTTGAAAATTATGTAAATGACTCCGAATATGATATAGTCC TACCGTACTACAATAAGTCTAAGTTCTGGTCCTGGACCTGAATTTTCTGT ACCCGTCCGGTACTTACTAATGTGAAAACGTGGTTTTAACTAATATATGC ATGTGCTTCTTTCTTTTTTGTATCAGGTATTCTTAATTGAGTACTTTATG TACATCCTGAGTACTGGATAGTTGTTTCATTTGTATGACAACCCTGGCAG CACGGTCCTGAAAGGCGTGTTAAGGATGAAAAAAAGGATTCTGGAATCTG TTGGTTAAGGGTATTTTGTGTCATCTTCCCCAGGTTGGCTGGCACAAGAT TCGTCATGGGTTGTATACTCCACCGGCACAGCGTGGATCAACAACGGAGT GACATATGATGCTACGAAAGCCTTGGACGGGGACACTTGGACCTTCTGGA ACCCAATGGGTATGGGTTGGAACTACAACAACTGGCACATGATACTCAAC CTGCGAGCACCCAAAACTCTAACCCGCATCGCTGTCAACAACTACGGAGA CACACACCATGACGTTGCAGCTTTCCGGTTGCAAAAGTCGCAGGGTCGGT GGCCGTACGGCTGGGAGGACGTCGCATCCGTCGATACCGTGCAGGGAGGG ACGAACCAGCGCCAGGAGTTCGGCGGGTTCCAGGGAACAGCGCGGTATTG GAAGTTCGTGATCACTCGGACCCACTCGGGATGGCAGCCATGGCTCAGGG AACTTAACCTACACAGAATCCCGTCACGGAAGATATCTACCTCCATGGAC AATGGAGGTATTATGTTTGTACTCACTCACTCACGCACGCACTCACAAAC TCGTTCACTTACTCACTAACAACCCCATGTACTTTCTCAACAACCCTTAC ACTACTCACAATCACTACACAGACACACAGTCACACTCACTCACTCACTC ACTCAGTCACTTACTCACTCACTAACCGTCTTATGTACTTAATTTAGAAC TCTAACGCATACAATCACTTTAGTACACACACACACACACACACACACAC ACACACACACAAACAGAAAAACTCACTAGTACTCACTCTATCCCACACTC ACACACAATCAGACACACACACACACACACACACACACATTTACTAGCTC ACTTATTTGCTATTTGCTCATTCGCTTACACTTGCTCATTCGCTCACTCG CTCACTCACTCACTCACTCACTCATTCACTCACTCACACAAAGTTACAAA TAAAGACACACTCACTAATCATAAGCGTCACTCAATCGCTTATATAGTAA ATATAGTAACCGGCAATCACTTACTCACTACGTAACCAAACTAACTCTCT CGCCACCAGAATCCATCAGACTCGTGGGCGGAAGTTCAGACTATGAAGGC AGGGTTGAAGTGTACCATGACGGACAGTGGGGGACCGTCTGCGATGATCA CTTTGCCCTGATCGACGCCAACGTGGTGTGTCGTCAGTTGGGGTACGGCA GCGCTACGGGGGCCCGAGGGAGAGCAACCTTTGGGGAGGGGTCCGGGCAG ATTTGGCTGGACAACGTGGCCTGTAGGGGCTCCGAGACAACCATCGGTGA TTGCGACCATAGCGGTTGGGGATACCATAACTGTCGGCACAATGAGGACG CTAGCGTGGTCTGCGACATGGGTGAGTCCAGAGTTTGTTGCAAAAGCTTG AATAAATAACAACGACAGTTCATACTCGTTTATTAATTGGGGAAGTATCT CACGTTTTTGCTAAAATTTTGCCTTTCTTGTTTGAAAGAATTTTATTCTT TTTTGTTTTGAATTTAACTTATTTTAAGAAAATACTTATAGCATGCTCTA CTAGAATTATTTTCTTGAACTTTCTTGGTTTCAGAAAGTTCAAGAAAAAA ATTCTTAGATGCAATTCTTGTTTGTGCTCAAAACGTTAACAGGGATTCTT GTTTGTGCTTAAAACAGGGATTCTTTACACAGAATAATTTCTTGCTGACA GAAAAATTTTCTTTGTAGAAGAGAAAACAAGAAAAATAAGAAAAACGATT TTTGGTAGCTAGGTTTCTAGAACATTGCTACCGGGGGTTGCTTCAGGATC GGCCTTTAGTCTTCTCTTTGTTACTTACCTCTATTAGAATGGAGGTATTG TTTTTGGTCTGCCTCTGTGTGAGTCTGATAGTGTTCACAGATATTTGTGG TCAACACAACTTTAAAACCTCTCAATGAGTTGTAATGATATTTGGTACGT GGGTGGGGATTGGAAAGACAAGTATCACCCCCTGGTGCATGACCCCTGTA ATGCAGAAGAATTTCCGATGCATCTATTTTATTGCCTTGACATGCTATGG TCTTGATTTTTTGGTGGCATTTTTATGTTCTGTTTAATTTCGTCTACATT CAGGCCAGCGAAAACCAAACTTCATGGTGCGAGTTGGCCCGAACAAGACA TTCTCACAGAATGACCAGTGCGGAGAGACTTACGTGGACACGCCGCTAGA CGGACAGACCATCGTGTTTTACTGCAACCCGCCGATATCCGGTCGTTATG TGTCCGTACAGCTGGTGGATCCGTCAGACACTCTAACACTGTGTGAAGTC GAGGTCTACGGTACCGGATAAAAGAGGAAACTTGCATGTGGCCTATGGCA GTAGAAAATGATAGAATTGTCTTCATCAATTTAACATCATGAACGATGTT TTACGTTTACACAAACGATTGTAACCATGCATGGCTTCTAGTTGCCAAGG TTTCATTTGACCTGCAAATTTCAGCTATCTTAGCTGTGTTTTATCCTTGT CGGTGGGTGGTTCCTTCACAGCGTGCTTCAAAATCATATTGCATCAAAAT CGTACGAATATCATGTATATCATTTTCAATACTTTTCAGTCGGTGTACTT GTTTGTTTGTTTGTTTGTCATGAGTTGCTATGTGTGGCAGCAGTTCTGCA ATCGGCATTTGGTTGCTAGGCACATTGGGAACACCAACAGGACGTAATTG ATCAAAGGTGCCATAAAGGTCCCAGATAGGTTGCAGGGAATGATGTTGGC TCGAGTCCTGAGTTTTCCCACTGTGTGTGGCAAAAAAATGGAATATATCC AGGATAATGCGACAGAGTTGTTTTTTGCCAATATTGTAATTTAGATAAGA TTGAGGATCTAGGACGAGTGTCATTTTGTTGTTAATTGCACACTATACAA CAATTAAATATTCTCTTTAATTGTATACTAGATAAAGTAAAGTAAAGTAT ACTAGATCAGTTTTCTAGTTTTCAATATTAAGTTAGCACAGAAAATTCGT ATTCCCATGTATCATGGGCTCCATATGTTCATACATCTACAACTGCTGAT TTTACGGAAAAAAACTCACCAAGAAAGGATTTTTAATGGCTTAAACCCTT GTTTTTATTTCGCGTCAACTGTAGACTCACCCTGAAGTGTTTAATCATGG TACTGAAGTGCCGACTGGTGATTCGTGACGGCATTGCAGCCTTGAAACTT

Coding sequence (CDS) from alignment at Sc0000026:1390917..1397466-

>Blg00082.0 ID=Blg00082.0|Name=Blg00082.0|organism=Branchiostoma lanceolatum|type=CDS|length=882bp|location=Sequence derived from alignment at Sc0000026:1390917..1397466- (Branchiostoma lanceolatum)
ATGGGTATGGGTTGGAACTACAACAACTGGCACATGATACTCAACCTGCG
AGCACCCAAAACTCTAACCCGCATCGCTGTCAACAACTACGGAGACACAC
ACCATGACGTTGCAGCTTTCCGGTTGCAAAAGTCGCAGGGTCGGTGGCCG
TACGGCTGGGAGGACGTCGCATCCGTCGATACCGTGCAGGGAGGGACGAA
CCAGCGCCAGGAGTTCGGCGGGTTCCAGGGAACAGCGCGGTATTGGAAGT
TCGTGATCACTCGGACCCACTCGGGATGGCAGCCATGGCTCAGGGAACTT
AACCTACACAGAATCCCGTCACGGAAGATATCTACCTCCATGGACAATGG
AGAATCCATCAGACTCGTGGGCGGAAGTTCAGACTATGAAGGCAGGGTTG
AAGTGTACCATGACGGACAGTGGGGGACCGTCTGCGATGATCACTTTGCC
CTGATCGACGCCAACGTGGTGTGTCGTCAGTTGGGGTACGGCAGCGCTAC
GGGGGCCCGAGGGAGAGCAACCTTTGGGGAGGGGTCCGGGCAGATTTGGC
TGGACAACGTGGCCTGTAGGGGCTCCGAGACAACCATCGGTGATTGCGAC
CATAGCGGTTGGGGATACCATAACTGTCGGCACAATGAGGACGCTAGCGT
GGTCTGCGACATGGGCCAGCGAAAACCAAACTTCATGGTGCGAGTTGGCC
CGAACAAGACATTCTCACAGAATGACCAGTGCGGAGAGACTTACGTGGAC
ACGCCGCTAGACGGACAGACCATCGTGTTTTACTGCAACCCGCCGATATC
CGGTCGTTATGTGTCCGTACAGCTGGTGGATCCGTCAGACACTCTAACAC
TGTGTGAAGTCGAGGTCTACGGTACCGGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00082.0Blg00082.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00082.0-exon-Sc0000026-1570713199:1397407..1397466Blg00082.0-exon-Sc0000026-1570713199:1397407..1397466Branchiostoma lanceolatumexon
Blg00082.0-exon-Sc0000026-1570713199:1396182..1396310Blg00082.0-exon-Sc0000026-1570713199:1396182..1396310Branchiostoma lanceolatumexon
Blg00082.0-exon-Sc0000026-1570713199:1393610..1394083Blg00082.0-exon-Sc0000026-1570713199:1393610..1394083Branchiostoma lanceolatumexon
Blg00082.0-exon-Sc0000026-1570713199:1392746..1393057Blg00082.0-exon-Sc0000026-1570713199:1392746..1393057Branchiostoma lanceolatumexon
Blg00082.0-exon-Sc0000026-1570713199:1390917..1392013Blg00082.0-exon-Sc0000026-1570713199:1390917..1392013Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1390917..1397466 -
Properties
Property NameValue
GeneIDBlg00082