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Blg00081.2 (mRNA) - B. lanceolatum

Overview
NameBlg00081.2
Unique NameBlg00081.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:149122..152795+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00081.2 ID=Blg00081.2|Name=Blg00081.2|organism=Branchiostoma lanceolatum|type=mRNA|length=3674bp|location=Sequence derived from alignment at Sc0000026:149122..152795+ (Branchiostoma lanceolatum)
TGGACCGTTCGCATAAAATTTCAAAGCAAATGGCGGAAAAGAAGAAGGAG GAGGATCTTGTTTTTCTCCGCGGTTTGTGGCGCGATTTCAGCCCGTCCGA ATGCTGAACGAGATCGTTTTGGTCGGCGGTCTGATTTTTGTCTTTACGTT GCTGTACTTATCCTTTCTTTTGCCTTCCAAGATGATCGGAAACGACGAAG ACGACAAAGAGAACTCCACCACCAAAACAGTGGGGAGGGGCGGAGGAGGG ACCGGGGACGGTGTTCTTCGGGAACTGGCCCTCACGAATGGACAGATCAA TCGAATGAATAAGGAAGAAGTGCGGCAGAAGCTAGAGGAGCTACACCTGG AAACAAGAGGCGTGAAAGAAGTCTTAAAGAAACGGCTGAAGTCCTACTAC AAGAAGGAGAAGCTATATCCAGACGTCAAATCCCCCACTCCCGAGCGATA CGACTTCCTCCTTGTGATAGACTTCGAGGCGACGTGCATGGAGGAGAACC CTCCGGACTTCCAGCACGAGATCATCGAGTTCCCCATCCTCCTGGTCAAC ACGGAGACTCTCATAGTGGAGGACCAGTTCCACTCCTACTGCAGACCCAC CATAAACCCCATACTCACCCCCTTCTGTACAAAACTGACGGGAATCACGC AGAAAATGGTGGACAGAGCTCCAGAGTTTCCACAGGTATTAAACTTGGAT ACTTTCTTCACTCCATTGTAATTAGCTATCATACATGATATGCAATCAGT AGGCAGCTTGTCTTCCTGCAGTACAAGCAAACGACAACATACAAATAAGC AATAACATACGTATACTACCAAAACTAGTTAAAGTTAGAATCTCCTGCCT AAACTTGATCTTTGTTGATGTTTGTATCTGATATGGCAAACTGTTCCATA TACATATATAATACAACACGGGGTATTCCGTATCACCCGAGGTACCAGCC TGACGGCCAGAGGGCGATCCGACCCGCGGGAGGGCTGGGACCAAGGGTGA TGCGGAATACACCGTGTTGTATCTTATTTATGTCATACCCACCTGAGAAA GCACACATTTTAATGCGGAATGTGCCAAATGTTGAGGGAGTTTTGTGTCC TCAAACACAAGACTGTAACAACATTGATTCCAACCTCCGAATCCGGTATT CAAATTTTTTGCGCCGGCACAACCGGCGCGCTCGAAATGCATTCGAAATA TTCTATGGAAGCCCGTGTGATACAACTCCCGAACCCTATGTGATCTGGAT AGTTATCACATGGTCCGGAACACCTGTATCAGGCCCAGGCATGACATAAA TGTAGATATGGACCTATAACACCGTATATGAAAGTCTTTTTCATGGCGTT TGTTCTTGGTTTCATCAGTCTGTGTGTGTTTCCTCTGTCTTGTACAGGTT CTGGAGGACGTGCTGGACTGGATGTCCAGTAAGGGTTACGGGATGGGGCA CTCCAGATACGCCGTGGCCACCGACGGTCCGTGGGACATGTGCAGGTTCC TGTACCAGCAGTGCCTGCACTGCGGCATCCCGTACCCGCGGCCCTTCCGC AAGTGGATCAACGTGAAGAAGCACTTCGCCAACTTCTACCAGACCAAGGG CGGCACCAAGCTGCAGGAGATGCTGGCCAGCCTGGGACTGCAGTTTGAGG GGAAGCCGCACAGCGGGCGCGACGACGCCGTGAACATCGCCCGCATCGCC GGCCGGCTGATCCAAGACGGCTGCGAGCTGCGCGTCAACGAGTGTCTGAA CAATGGCAGGGTGGAACCCGTGGTTCCCCCACGCGCCAAACTGTCTGTTA GTAACTAGGAGGCTCTCATACGGCCAAACAACTGTTTTGATTTCATGGAT GATGATATTTGATGATAATGATAATAAACTGTTCTTGCTTGCAAATTTTA TGGATGATGATATTTGATGATAAAGATAATATACTGTTCTTGCTTGCAAA TTTATTTATTTATTTATCAATCTTTAGGGTGGTCCCTTCAGCTAACATTG TAGCTGATTTCCAAGGGAGCCCTTACAAATGGCGAAGACTGAACCCCCCT CTGCAAGCCAGATCAGTGTACAAAATGTACGTTAGTTGTAAATAATTTGT CTGCACTTCGTTGTTCATTGACTGATAGGTGAGAGAAGCCAGGTAGTGCT GGGTACCTAAATGTAACATCAAGTACAGGTACAGGTACCGGTACAGAGGT TTAGGTACAGGTCCGGACCTGTACCTGAACATTCTGAAAAATTAACATGT GTTCCTCTGAACTTCTTCAATGACAAAAACATAAACTGTTTTCAACTTGC CAGTACATGTATCTTTATTCAAAGAACATAACTAGGTTTCCTACCACCAA ACTCCCTTGGCCTTGCTATCAAAACTACCTGAAATCCTGAATGATCTGTT GCATATTAGTTACGCTGTTCCAAGGTATCACTTTGGTCACGTTTGGTGTT GCATGAGGTCAGGAGATAGTCACAAGGTAAGCACATACTTGGTGTAAATT TATATTGGTACAGTACCGGTACTTCATGATTTTCGACCTGTTACGAATCA ATTTTTACGGTACAGTACTGGTACACAATACCGGTATGCAGCACGAAAGC CAGGTATTGATTCTGTCTTGTTTTCCTCTCGGAAAACAGGAAATCTTGCT TTTTAATAATGATCTGCTTTTTAATAATGATCAAGACAACTACAATGTAT ATGGAAGGGACAAAGTGGTTAAGAAGTATCTGCACGCAAGATAGAAATCT AAAGTGAACAAAAAATGTAACCCATGAAACCTTGATTTTTTTTCTGCCTT ACTCCAAATTCAAGAATAAAAATCCGTCAGTTGCAACAAACACTGTTCAC TTGGAATTTGGATCAATTCTTGTTACAGTTGTTATCTCTTCATAGTGGCG CGTACCTAANTTATCTCTTCATAGTGGTGCGTACCTAAACCTGAGTTTAG GTTTAGGTTCAGACTTGAGTCCAGAGGTTAAGGTTCAGGTTCGGACTTGA AAGTCCGGACTTGAACCAATGGAATATGTGTTCCACTGCTACGAATATTT TTTTCATGTTTCAAGTAAAATTGCATATCGGCATATATTTTACATGCATT TTGAAAACTATAATATGAGGAATTATATACAGTCAGTAATTAATGCAGAA GTTCAGTTATAAACGCAAAACAGCAATGTTTTCATATTTTTCCAGTGCAA ATTTCATGATCTAAGGAAGCTTTACCGGTTTAAATCAAGAAGGAGTGTAA AAGGGAGAGATTTTTTTTTCAAGTCCGGACTTGATTCCAGATGTTTAGGT GTTTTCTTGGACTTGAACCTAAAGGTCAGGAACAGGTCCGAGGTTTAGGT ACGCACCACTATCTCTTTATCTTCAGGAATTTGGTAACCATTTTGCAGTC TTCCATCAAATCTCTGGAGGATGCCTGTCTATGAAATCAAATTTGTATGG CCTACTCTGGTGTTATTTGTCAAACTCATGGAAACATCTCTACCATTAGA ATGCCCAAAACAAGTATTGAATTGGCTTAGGTGTATCCTTGGCAAACAGC CTTAAAGGTACCCTAAGCGATTTCTGGGGATAAAACTTGAAATATTCTTG GGAAAGCAATTCTGTCTGGTGAAATTGAAATTGACATTTACTTCCCCATA TTAGCACATTTGCATCATTATTTC

Coding sequence (CDS) from alignment at Sc0000026:149122..152795+

>Blg00081.2 ID=Blg00081.2|Name=Blg00081.2|organism=Branchiostoma lanceolatum|type=CDS|length=996bp|location=Sequence derived from alignment at Sc0000026:149122..152795+ (Branchiostoma lanceolatum)
ATGCTGAACGAGATCGTTTTGGTCGGCGGTCTGATTTTTGTCTTTACGTT
GCTGTACTTATCCTTTCTTTTGCCTTCCAAGATGATCGGAAACGACGAAG
ACGACAAAGAGAACTCCACCACCAAAACAGTGGGGAGGGGCGGAGGAGGG
ACCGGGGACGGTGTTCTTCGGGAACTGGCCCTCACGAATGGACAGATCAA
TCGAATGAATAAGGAAGAAGTGCGGCAGAAGCTAGAGGAGCTACACCTGG
AAACAAGAGGCGTGAAAGAAGTCTTAAAGAAACGGCTGAAGTCCTACTAC
AAGAAGGAGAAGCTATATCCAGACGTCAAATCCCCCACTCCCGAGCGATA
CGACTTCCTCCTTGTGATAGACTTCGAGGCGACGTGCATGGAGGAGAACC
CTCCGGACTTCCAGCACGAGATCATCGAGTTCCCCATCCTCCTGGTCAAC
ACGGAGACTCTCATAGTGGAGGACCAGTTCCACTCCTACTGCAGACCCAC
CATAAACCCCATACTCACCCCCTTCTGTACAAAACTGACGGGAATCACGC
AGAAAATGGTGGACAGAGCTCCAGAGTTTCCACAGGTTCTGGAGGACGTG
CTGGACTGGATGTCCAGTAAGGGTTACGGGATGGGGCACTCCAGATACGC
CGTGGCCACCGACGGTCCGTGGGACATGTGCAGGTTCCTGTACCAGCAGT
GCCTGCACTGCGGCATCCCGTACCCGCGGCCCTTCCGCAAGTGGATCAAC
GTGAAGAAGCACTTCGCCAACTTCTACCAGACCAAGGGCGGCACCAAGCT
GCAGGAGATGCTGGCCAGCCTGGGACTGCAGTTTGAGGGGAAGCCGCACA
GCGGGCGCGACGACGCCGTGAACATCGCCCGCATCGCCGGCCGGCTGATC
CAAGACGGCTGCGAGCTGCGCGTCAACGAGTGTCTGAACAATGGCAGGGT
GGAACCCGTGGTTCCCCCACGCGCCAAACTGTCTGTTAGTAACTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00081.2-exon-Sc0000026-1570713199:149122..149806Blg00081.2-exon-Sc0000026-1570713199:149122..149806Branchiostoma lanceolatumexon
Blg00081.2-exon-Sc0000026-1570713199:150519..152795Blg00081.2-exon-Sc0000026-1570713199:150519..152795Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00081.2Blg00081.2-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:149122..152795 +
Properties
Property NameValue
GeneIDBlg00081