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Blg00080.0 (mRNA) - B. lanceolatum

Overview
NameBlg00080.0
Unique NameBlg00080.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2510869..2513412+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00080.0 ID=Blg00080.0|Name=Blg00080.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2544bp|location=Sequence derived from alignment at Sc0000026:2510869..2513412+ (Branchiostoma lanceolatum)
ATGATTGGACTGGGTACCGCCATGACTGCTGGCGGTGTGGTTGGTGGTCC TGTGGGGTCCGTAGTTGGAGGTGCTGCCTGGATCCTTGGCCATGCGATTC CCATGCCATTCAGCCTGATACAACCTTTCTTGTAAGCATGAGTATATGTT AAGACATTTTATTTCATACAATATGAAATAACAATACATAGACGGACAAA ACTTGAAAACGGATACAGCGTATTTCACCCCCCTCCATACCCATGCAAAA ATGGACAGTTCCATATCAACCTTTTGCAGAAATGTAACATCCCAAAATGT ATTTCTTGCCAAATGGACCATCCTAAAATCACAACACTCTAAAAAATGAA ATTTTCCGAATTTGCCCCATGGACTGTTCCAAACGTGCCAACATGTCATA TGGACTCTTCAAAGGTACCCCCTCAAAAAATGAAATCTTATGTATTGAAT CATGTGCACTAGAGTGTGTGCCGCGTTCACGTGCATTTCAGTATTCATTC AAGTATTGACAAGAAATCATGTGCAATGCCAATGATTGTATCAATGTTGC TTCTTTGTCATACCTTCACACTAATGACAGTCATATTTGCACTGATCAAC TCCTTTTTACCTCAATGTCATTGGTCATGAGTTAAATGACTGAAACTGAA CTAACTTAATTTTTCTTGTTTTGCTACAAACAGTACAAGCTTCCTCGAGA AGATTCGGTCTGCAGATGTCGAACTGAAAGCAGAATAACCTCGATCAGAA CACCCAGAGTGATTTGAGCGGCTAAGTAGCTACATTTGTTCATATGTTAG TGACTATGTAGCTACATTTCTCACATCTGTACGAAAGCATTTCTACACGT GCGATAGGTAACAAGGAGTGCCATTCCTGTGCTGAAACTCCCCTGGACAA CCGAGAGAGATTGTTTTGTAAACGAGTATGGCTTTTATACACAAATTATT CATAAACGAAGAAATACATAAGAGAATAATGGCCATAATGAAAATCTAAA GTCATGTAGTGATGCTGTCTATAAAGTTTCAAAGTGCCTTTTGAACCTTT CCTTTGATTTCAGATAAGTAGCCTGTTAATTAGAGTAAAGTACGTTGTCT TGTGAATCTCCTGCTTTATTTTAATTTTGACAGAATGCATTGCATTTCTG TCAAGATTGGCTTCTTAGAAATAGTGAATTCCAGAGGACGAAGTTTCGGC GACTTCATGTCGGAAGTTAAAGTGAATTTAAAGTACATGTAACGTTAACA GTTACCAAAAAGCGTCCCATTACGAGTTTAGATAAGTCTGATTGGGTTTT GCATTTCAGTTTTTGCATGGCATTGTATGAGTGAATATAGATTTAGCATA GGCCTTTGACTGTGTTTCTGAATTCATATCGGCAAAACACATACATTTAA CTCTTAGACATGTATTCCTATTAATCACGCAAAACGTTAGATCAACAGAG AGAACTTGGTGTATAAACAAAGTTGTAGATGTATATGCACATGTAGCTTT GTCATTTTTTTCATATAGCACAGTGCACATGTTTATCACGCTTGAAATGG CTTCATATAAATGGTTTCAGTAAAGCAGAATTGACAATACAATAAACTGC ACAGCTTCTCACAAACAATTTGCGTGTCTGAAATCGTCTACCTGTGCTGC CCTTATTCTATCTTTTAGCTGAACTAACAGTTACGAGAACATTCTTCGAA CAGTGACTAGAAAATGGTAGCGAAAATACGCACCTCCAAATTTTCGACGA CTCCTGTCCGTCTTGTTCACGGAGTGGCCTAGTCTCGCGAGAACACGAGA CTAGGCCGAGACTTGTGACGATCTTCTTGCCTCCCCCGCCTCCTTGCGGA GCAGGGGTAGGTAGGACTTGGGCAGCTCCCAACCTCCGGTACGGTTCATC CCAGCGCGTTCCAACTGGATGTGGACTGTGGCTACCCAGAATGGGTGCTC AAAGAGGGGGACAACAACGCTAGGAAAAAGGTGACCACGGACCACAATCC CCAAAACAAGGAACGACGTGCCAAGAGTTTTGCTGTACTCCCCTACATCA AAGGTGTCACTGAGAGACTGAAACGTGTGTACGCAAAACACAACGTCAGC CTGTTTTCCAAACCTGGATATACACTACGTAATGCTCTGGTCAGACCGAA AGACCCTTTAGTTCCAAGTGAGAGGTGTGGCGTCATCTACAAAATATCAT GTGAACAGTGTGGTGAGGCATATGTGGGTGAAACAGAGAGGTCCCTAGGA GAACGGACTGAGGAACATCAAAAGTCCATAGACTGTAGTGACGGCATATC CGCACTCAGCCAGCATGAACTAAAAACAAAACAAAGGGTCACCAACGGCC CAATCCAGGACATCGTAGAGATCGTAGATCTCGAGTCACGTAATGCTCAC AGGAAGATCAAAGAGGCAGTCCACATCCAGTTGGAACGCGCTGGGATGAA CCGTACCGGAGGTTGGGAGCTGCCCAAGTCCTACCTACCCCTGCTCCGCA AGGAGGCGGGGGAGGCAAGAAGATCGTCACAAGTCTCGGCCTAG

Coding sequence (CDS) from alignment at Sc0000026:2510869..2513412+

>Blg00080.0 ID=Blg00080.0|Name=Blg00080.0|organism=Branchiostoma lanceolatum|type=CDS|length=771bp|location=Sequence derived from alignment at Sc0000026:2510869..2513412+ (Branchiostoma lanceolatum)
ATGATTGGACTGGGTACCGCCATGACTGCTGGCGGTGTGGTTGGTGGTCC
TGTGGGGTCCGTAGTTGGAGGTGCTGCCTGGATCCTTGGCCATGCGATTC
CCATGCCATTCAGCCTGATACAACCTTTCTTCGCGTTCCAACTGGATGTG
GACTGTGGCTACCCAGAATGGGTGCTCAAAGAGGGGGACAACAACGCTAG
GAAAAAGGTGACCACGGACCACAATCCCCAAAACAAGGAACGACGTGCCA
AGAGTTTTGCTGTACTCCCCTACATCAAAGGTGTCACTGAGAGACTGAAA
CGTGTGTACGCAAAACACAACGTCAGCCTGTTTTCCAAACCTGGATATAC
ACTACGTAATGCTCTGGTCAGACCGAAAGACCCTTTAGTTCCAAGTGAGA
GGTGTGGCGTCATCTACAAAATATCATGTGAACAGTGTGGTGAGGCATAT
GTGGGTGAAACAGAGAGGTCCCTAGGAGAACGGACTGAGGAACATCAAAA
GTCCATAGACTGTAGTGACGGCATATCCGCACTCAGCCAGCATGAACTAA
AAACAAAACAAAGGGTCACCAACGGCCCAATCCAGGACATCGTAGAGATC
GTAGATCTCGAGTCACGTAATGCTCACAGGAAGATCAAAGAGGCAGTCCA
CATCCAGTTGGAACGCGCTGGGATGAACCGTACCGGAGGTTGGGAGCTGC
CCAAGTCCTACCTACCCCTGCTCCGCAAGGAGGCGGGGGAGGCAAGAAGA
TCGTCACAAGTCTCGGCCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00080.0-exon-Sc0000026-1570713199:2510869..2510999Blg00080.0-exon-Sc0000026-1570713199:2510869..2510999Branchiostoma lanceolatumexon
Blg00080.0-exon-Sc0000026-1570713199:2512773..2513412Blg00080.0-exon-Sc0000026-1570713199:2512773..2513412Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00080.0Blg00080.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2510869..2513412 +
Properties
Property NameValue
GeneIDBlg00080