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Blg00078.0 (mRNA) - B. lanceolatum

Overview
NameBlg00078.0
Unique NameBlg00078.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1735457..1737257+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00078.0 ID=Blg00078.0|Name=Blg00078.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1801bp|location=Sequence derived from alignment at Sc0000026:1735457..1737257+ (Branchiostoma lanceolatum)
ATGTTATGTTGGAGAGAGGTCAAGCAATAACCAGAAATGTATGTTGGTGG AGTTTATTTCATTTCTTTGTATCTGAAACTGTTATGTGAACCAGTTAGAA TTGCCTTGAAGAAGGTGACAGATTGTCACCGAAATGTCGGTGGAATAAAT CTCTTGGTTGTGTAAAATAAGCATTAGTTTACATTGAAAGCCCATTTAAT TGCTCCTGGCTCCTGTGAATGTATGTTATCTTTATCATACCCAGGGTGAC ATCACTCTCCGCTGGTCCGGGTGGAGAGATGACGACTCGGGTATTGGTGA GTACGAGTACGAGGTGTACAAACTCCGGCCGTTCGGCGATATGCTGGGGA TGAGAGGACTATCTCCTGTGGACGGACAGAATGGCACGGTTGGAGCAGAA ACAACAGAAACAAGCATCCATTTAACTGAACCAGGTGGGATAGTGATATC ACTTAAGTGAAAAAAGCACACCCTATCAAGACGGGGAAGCTACCCGCGCC CGCTAAGTGCCCGCGCCGACTTTCACATCATATAACTTCTTAACGATTTG TGCCGGTACTTTAAAATTTAGTAGAATTTAGTTGGCAACAATTGTGTTAT AGCTAAGTAATTTTATCGTGTATTTTGTTTTCATGAAAACGTGTTTCTTG CAGGTATACTCTACAAAAGTCCCTAATTTTTAGTTAAAAAGTTGTCAATG TTTTCTGGCTAACCAACTCTTTTTTTTACCTCATTGACATTTTGTCTTGT ATTCAATATCTTAATTTCTCTGAATTCTTTATCTATCTATAGTTTTTTTT AATCAGTTTGCACAAATATAACATGGTCTTTGGATCACTGTAAAACATTT AGCAAACATAAGGCAATGGATAACTGAGAAAGGCTTTTCATATTAAGATG AAATACATTACCTGAAATGCTTTCTGTGACATACTAGTTCTAAATAACGG CCGTTTTAACATCTCCATAGGAGTATACAGTATAGTGCTGACTGTTGAAG ACGCCTGTGGACCGGACGACGGGAACTTCGTCATCGCACGCAGATTCCTC ATCTATGACGACAACAGCACAGTTGAGGCTGACACATCCGGACACCATCC CATGTGGGCGGAGTCAGCCTCCAACATCACCGGGAGGGTGTGGCAAACCA ACCTGCAAGATGCTATGGGAAACGTGCCTCAGGTCATATGCCGTTCATTT ATCCATTTTTAACTATTTATACCTTGCTCTGGATTATGGAAGCTACAACA TGTTGATATGATGTTTTTCTCTTTAGGTCACTGTTTCGTGGCCGGACCAC TTTTGCAACCACCTACACAAGCACAACAAGTTTCTAAATGCTATAGAAAA CCACACGTCGACCATCCTGCCGGGTTACGAAGAACTGACAGGTAATAGAC AATATTCTCCTACCAAGGCCTTATCAATGACGACGCTTTTATCTAATATT AAGTAGATTCTTTTCCTAAGCGTTTGGGAAAGCTGATCCGAAACTTGTGA TAGTTTTTTGACTACTTTAAGTTACTGTTTCGATTTCGTCAGTTGTAAGG TTTACTAAACTCCTGCACCATCTATTTACAGTTGTAACAACTTCTCATTA TATTCCGCAGGTCAGCCCCCGGCAACCCGGTCCCGTGAGGCCATCCCCAA CACAAACACCATCACGATGTTCCAGACCGACTGGGGTGTGGACCATGAGG GAGGCAGGAGCCTGGGCAGCCCGCCGGGCAACTGGCAAAACGTCACAAAT CTTATGGCAAGTCAAAAATTCCACGATTTAGATGTGGACGTATTTACTTG A

Coding sequence (CDS) from alignment at Sc0000026:1735457..1737257+

>Blg00078.0 ID=Blg00078.0|Name=Blg00078.0|organism=Branchiostoma lanceolatum|type=CDS|length=726bp|location=Sequence derived from alignment at Sc0000026:1735457..1737257+ (Branchiostoma lanceolatum)
ATGTTATGTTGGAGAGAGGGTGACATCACTCTCCGCTGGTCCGGGTGGAG
AGATGACGACTCGGGTATTGGTGAGTACGAGTACGAGGTGTACAAACTCC
GGCCGTTCGGCGATATGCTGGGGATGAGAGGACTATCTCCTGTGGACGGA
CAGAATGGCACGGTTGGAGCAGAAACAACAGAAACAAGCATCCATTTAAC
TGAACCAGGAGTATACAGTATAGTGCTGACTGTTGAAGACGCCTGTGGAC
CGGACGACGGGAACTTCGTCATCGCACGCAGATTCCTCATCTATGACGAC
AACAGCACAGTTGAGGCTGACACATCCGGACACCATCCCATGTGGGCGGA
GTCAGCCTCCAACATCACCGGGAGGGTGTGGCAAACCAACCTGCAAGATG
CTATGGGAAACGTGCCTCAGGTCACTGTTTCGTGGCCGGACCACTTTTGC
AACCACCTACACAAGCACAACAAGTTTCTAAATGCTATAGAAAACCACAC
GTCGACCATCCTGCCGGGTTACGAAGAACTGACAGGTCAGCCCCCGGCAA
CCCGGTCCCGTGAGGCCATCCCCAACACAAACACCATCACGATGTTCCAG
ACCGACTGGGGTGTGGACCATGAGGGAGGCAGGAGCCTGGGCAGCCCGCC
GGGCAACTGGCAAAACGTCACAAATCTTATGGCAAGTCAAAAATTCCACG
ATTTAGATGTGGACGTATTTACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00078.0Blg00078.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00078.0-exon-Sc0000026-1570713199:1735457..1735474Blg00078.0-exon-Sc0000026-1570713199:1735457..1735474Branchiostoma lanceolatumexon
Blg00078.0-exon-Sc0000026-1570713199:1735701..1735890Blg00078.0-exon-Sc0000026-1570713199:1735701..1735890Branchiostoma lanceolatumexon
Blg00078.0-exon-Sc0000026-1570713199:1736427..1736638Blg00078.0-exon-Sc0000026-1570713199:1736427..1736638Branchiostoma lanceolatumexon
Blg00078.0-exon-Sc0000026-1570713199:1736733..1736847Blg00078.0-exon-Sc0000026-1570713199:1736733..1736847Branchiostoma lanceolatumexon
Blg00078.0-exon-Sc0000026-1570713199:1737067..1737257Blg00078.0-exon-Sc0000026-1570713199:1737067..1737257Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1735457..1737257 +
Properties
Property NameValue
GeneIDBlg00078