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Blg00076.0 (mRNA) - B. lanceolatum

Overview
NameBlg00076.0
Unique NameBlg00076.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:370504..379110-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00076.0 ID=Blg00076.0|Name=Blg00076.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8607bp|location=Sequence derived from alignment at Sc0000026:370504..379110- (Branchiostoma lanceolatum)
GGTCAAAGTCCGATCTGCGGTTACCTACGCGCTACTTTAGAACTTGGGTC GGCCATGTTCCAGTGCTAGGTAATACTAGCGAGGTTCGACTGAAACTTCT GCTATATTTCAGCTCTTTACGGACTGACTAGCCGGCTAAGATGGAGAGGG CCACCTTGGACAGTTCTTCAGAGGCGGTGGAAGTGGAATGGTCCGCGGGA GGGGTGGACAGGTTCCCGTACATCTGGCTTAGGGACAATTGTCAGGTCAG TCTCCAAGAAAGTGGTAGGTTCCATACATTCATATACTCTTCTCAAGGCA TTTGGAATCTTAATTTTGTAGCAGGCGGAACCCTACGGGCGAAAAACACG AACCCTCTATAGTTAATTTGAGGTAAAGTTGTGGATATGTCAACATATCG AAGCTGTTGTAAAGAAGGTTAACTCTGAACATTCTTGTGTAGAAAACAGT GCATATTTGAGTAGGTAAAATTAGTCTCATATCATCTTTGAAGCCGTAAT GGCAGTGATATGTTATCCACAGTATCTTGGGCACGCTATTGGAAGGCGGA GCCAAAACCTCTCCTTCCACCATCTTTTATCTCCCCAAACCAAAGTCAGG TACCTATTTTAACACCTGGGTGGAGTGAGGAAAGTCATGTGTGCCTTTCC CAAGGGCACAACATGAGTGGCATGACAAGGCCCCAAATGCCCTAACCGTC AGGCCAACACGACGCCATGTAAGTAGGCAATTAAGAAAATACTATTAGTG ATGACCTTTTCTTAGGAAAGAATACACATTTCCAATGAAGTGTAGTTTTT TCACGTGCTGTTCTGTCCCGACAGTGCGCGGAGTGTTTCCAGGCCGACCT TAACAAACGTTTGGTTCTGACGTCAAAGCTGGACCTGGACGTCTCTCCCG TCCGCGCAGGCGTACAAGGTGAGTTTCCATTGAAGTGGGCTCTCCTTTAT TTGTCAACAGCCCACGTTGAACTAAAGATACAGTCTTTGATACGTGATCA TTTTTGTCTTCTTATGTAAGTTTCGTTTTGTTGAAGAAATATAACCATAC CAGTTGCGCGCACAATATGTATATAAATATCTGAATATACTTACAGGCAA CAGCCTCTTTCTGTTATGTCAATAGTCAATAGTCAATAGTCAATGTAATA GAAACCACACACATCTGCTTGAAAAAAAAGGGCGCGGGGTTAGTGACCAC TGGCGCCCCCTGGCGAGTCTGTGAGGAACTAGGCGAAGCTTGTGCCACAC AGCTACATGTGTGTCAATACTAAAAGCTGTGAGTGAAAGTTTATGTATCT TTCACGTGTGCATGTTTGTGACGCTGCGAGTGTCAACTGATGGTGGGTTT ACGTTGGGTAGCCTGGTGAGTAGGTCGCGTGAGTAGGTCACAAATATGTA AATTAGGTAAGGTCTAATTTGCATATTCGTGATCCCACAAATGGCACGCG AGCCGGTGAGTACTAGCCGTGGCGACTCTTTTTATATACACATGTAAACC GGAAGACATACCCGCACGGCCTCCAGATTATGTAAATGTTGTAATTCTGA TAGAATAGAGGACGAATACCATTTTGTAACAAAATGTAGGTTGTATAAAA AGATAGTAATGAACTGTATAGGCTTGTACAAAACCTATTTCCCTATTTAA ATACTTTAGAAAAATTAATATCCCTAATGCAAGTAGACAAACCTTCCATC GAGACACAAACCTGTTCTTTTAGCTCTACTATAACTGACAAGCGAGGAAA AGTTGAGTCTATCTAACGTTGGGTAACATAAATTCGTGGGGTACTTAAAT TCGGGATTTTTCGAAAACGGGGTATTTAGGGATATGTGCTAGATGCAACA TCAGTAATACCGCTAGAAATGCAAACTTGACAGACTAACGTATTCAGAAC ACTGTCTGAAAAGCTTCGATAAGCATGGATTAGAAGGCAACGAGGACAAA AACTCGCCGTCCCTTATTGGAACAGTCTGTGGGCTTCGTGGGAGAATCAC ACTGCATCGTTGTCGGCTGGTTTATTAGACAAATGTCACACCCGCTTCCT GCTAAACACAATCATTTACAAGACAACTTATTTTCTTAAAATTGCTGACC TGCAATTGGACTCTAAGTGTGATCAATCATCAAAACCCCTCTTTGTTGCT ACAACCTACGGCACGTGTATTTTCCCGCCGCCATATCATTACCCAGAATC CTGTTGTCAAGCAGACGACAAAGGTTTGTGAGGAACACTTTTTTGTCTAA ATGTTGCGTGTGATTGTGGACTGAGGACGATATTTTCCTCAAAGTTTGCT CCTAACACAACAAGGAATACATGGACATAGTAGTATTATCAATGCTACGG CATCCGGCTAACTTGCCATGAATAATGTACACGTTGCCATGACGGTGGAT GTCGACTTTGACGTTCTATAGCTACCGACTCAACACACGGGTTGTTCCCG TAGGCCTGATGTGTGCGGTACGGCCGTTTTTTCGTGTATTTTTTTACTTG GACACGTCTATATCCATAGCACTCTCCTCAAGCCAAGGATGGAACGAATA GCTGCTGTATAAAATGTAATTAGCGGCAAGATATTCAAGACGAATCTTCT ATCCCGAATTAATGTGCACCCCTGTCCGATAGCACCGTCATTGTGCGTGC GGCGGACGGTAGTTTTAAGTTGAAATATTATGGTGTCAGCACGACTAGAG ACAAAATCTACCATATATATGATTAGTGCAAAGATAGTACATGATACTGA CAGAATGATAGAAAAAAGGATGGTTTATTGTTCTGCTAGATTGATTTCAG TCAACAATTATCGGAAAAATCCCGAATTTATGTTACCCAACGTTAATGAT AGTTAGTTTTATTTTGTATCCGTTAACTGTATCTGTTCATCATGTTTTGT TTTGTTGTGACCTGTGTTTAGCCCATTGTGGCAAAAATGTGCAATAACTG ACAGACAGAGGTCTTCATTCCATTCATTCTATAATGTACAAGAAAATCCG TCCTCCTAGAGTCGCCACTGTTCCAACATGTTGCCACGTACAGCCTTTAC TTTCAGACAGAGGGAACACGCTGCACGTAACGTGGCCGGACGGACACCGG AGCCAGTACGGCTGGCAGTGGCTGCGGGACCGCTGCTTCAGTCCACGGGC CAGGGCGGACAGGGAGCAGCGCTGGAGGAGAAAGGCAAAGGAACAACAGA CTATTTCGCTGTGTCGACGACGTCTTGTCGCGTTGCCCTTTGTTTTATAT GCTAGTTTTTGCCATCTCTTAAATATTAGCGAGTTAAAGCGACGGACTTG CACTTTGGAAAACACACTGGCCCAAGAAAGCAAGGAAAAAGATAATACAC AAGCTGTTGGTGACAAATTGCACGAACATTTGCACACACATCTCTTTTGA TTTTGCCTGGTGTATGGTCGGTATATCACTGCAACACTGTTTTTAAATCG AATTCTCCATGCTATGTGAGTTTGCACTGAAAAAAATGAAAACTGTGTAA TGTTTCTTACATGGAAGCTGAGCTGTGGAAGCTGAAATAAATATACAGTA AATCAATTTATTTTCGACGGGACTTCATTTCGTGCCAGGAAAGAAAAAAA GGGAATTTCGCTATGTTTCAAGTTCACGGTTGAAAAAATTCTGTAGCACA GCATCAAAACATTGAAAACGCATATTCATGCAATCATGGTGTCTTGAATT CGGGATGGAAAAGGCACCGTGAAAACCGTGTAAATGGAACTCACCGCCAA CATCTCAAGATTTACACTTTGTGCTCAATATTAGGTTAAAAGGTTAAAAT CCTCCCACACCATAAGATGTATAGGGCGGAGCCCATCTCCGTTTTGTAGC CCTGGGCCACACTGTGGTGCAATCACTGCAGCTGGAGGCTAGTCCACTGG CAGTGGAATGTGTTTAACTTCCATACTGTTTCATAAGTATTACCATTTTC ATAAAGTCTTTGGTATGACTCAATGCGCCTCTTGACCAGAGGTGTCCTAC CCGGGAGTTAAACTCGGGCCTTCTGGTTCCAAGTAATCAGAACCAGATGT GGTAAGTAACAGAAGCGCAGACCACTACACCACAGGGACACCCCCTGTGC TCAATATGGGCAAACAAAATTCATATTTTTTCTCTTCTCTTCTTTATTGT TTCAGAAGCAGCTGTGGGGGGCTGAACTCTTCACAAACCTGCCCACGGCT GATTTTCCCGCGCTTTTGACAGACGACCGAGCCTTGTACGACTTCCTGTT TCTCCTGGACACCATTGGCCTCGTTCTGGTGCAGAACGTGCCACGTCAGG TCGGGCAGTTTCAGGAGCTGGCCAATCGGGTGGCGTTTCCCAAAATGACC TTTTTAGGGTGGGCGTCACACTATATCTTTCTTCTTTTTCTCTCTTTATA TTTTCTTCTGACTAATTTCTTTTATCGATTCCGATTTTAATTCAAGGCAC CCCAAGAACACCATCAGCGGTGACCATTGTCAAATTAGTATGTCATTGTC AGCTATGAAGAATTGAAGTCGGAAAAAGTTAATGCAGCAAGTGTTTTCCT ACTCTTAGAAGAAGAAGAAAATGGTTATTTACCTCAACGTTGGTTTGCTT AAAATAGATCGATTTTGGATATGGGAGACACCTTCTTCAGAGCTTCTGAC TGGAGTACTGCTTCTCACCGCTATAAGTGTTGTCACCGCAAAAGCACCAC CTACATCGGCAGCGGTGAGAAGCAGTACTCCAGTCAGAAGCTCTGAAGAA GGTGTCTGACAGACATCGAAACGTTAGCAGGTGAGATCAACACCTGGTTG TGTATAAAGAATCTCCCATATCCTATATTCTATCAAACTGATGAGATCGA TTTTGTGGCATTTACGTTCTGGTTTTACTTTCCTTCCCCACCACAGGGCG GAGCAGATGTTGAAAGTCAAGCCCATCCATGGTAACTTTCTCATGAGCAC CGCTCCACTCGGTCTGCACACGGACCTGGCGTACTACAACTACCTGCCGG GGGTGAGTGTGTTTGTTGATAATGCACCATGGCACCATACTGACCGATGG AGGCCATATATTATGTATATATATATATACATAATATATGGCCTCCGTCG GTCAGTATTGACCATGGTAAAATCCTAATTCACAACAACCCTACAGCATC GACTATGGCTAAACAACCCTATACGAGAATGGCAGTCTCTGCCACAAAAA TCACATCTTTAAGCTGACTCAGTTCTGTTGCAAAGCTCTTTTCTGCGGAT CCGCTTTTCTTCTGCACTGTGCATCAGTCTGGCTTCTCCTGATTTGAGCT GTCTGGACAGTGTGCATCTCCACCTGGAACGGTCACTTGCAAGGTCCTCA CAAACACAAACACACACAAACGAACAAACAAACACATAAACACATTTGCA CACTTCGTTTTTCCTTTTGTTTTCTTCTATGCAAAACACATTACATAAAA TTCACCGAAAGTTTTCATATTTGTCACTCAAAATGCAGGTACAGATGATG CACTGCATCAAGCAGACGGAGTCGGAAGGGGGCGCTAGTGAGCTTGTGGA CGCCTTCAACGCCGCCTACCAGCTGAAGCAGGAGAACCCGGATGCCTTCA AACTCCTCACGACGGTCAAGGTCAACTTCCACAGGATAGGGATGGCCGAA CCCAAGCACCACATGAAGGAACGCCACCACATCATCAGGTGAGAAACTCC TACTCTCCTTCTTATGAGTCTTTTTCAAGGCAGGACTATGCATCTTAGGC TCCTTCGCCGACTTCTAGGAACGCGTGCTGATTCGTGATTTTCAACATGT ACTTGAACCATTGTCTTTTTACTCGGGGTCTTCTTACAAGTCCAGCCTGT AGCTGCGGGTGTCCATACGAAACGATTTCTCATTACCTGCTACACTGCCC TACAGTACGTGTATACTTACCAGCGTTCAGTTCTCTTCGGCAAGCTTTCT AGGATTATTGGACACACAATTAATTTCAATGTCCTCTCTGACAACGTTAT AAAACAACTTTTAATTCTACGTGGTAGTTTGCTCTGTTCTTATTGCATCA ACTGTGAAATAATGTTACCCACGCAACACTACATCACAGAAAACGTTTTT AGGTATAACGTTGGTTAACATAAATTCGCGGGGTATTTAAATTCGCCATT TTTAGAAACGGTTTATTTTAGGGATATGTGCTAGATGCAAAATCAGTTAT AACGCCAGCAATGCAAACCGGATAGACTAACGTATTCAGAACACTGACTG GAAAGCTTCGATAACCATGCATTAGAAGTTGGCTACGTCAAAAACTCTCC GTCCCTTATTGACAGAGTCTGGGGGCTTCGTGGGAGAATCACACTACACG GTTGTTCGTTGGTTTATAAGACACATGTCACATCCGCTTCCTGCTAAACA CAATTATTTACAAGACAACTTATTACAATCTCTTTTGCTAACCTGCAACT GGATTCTAAGTGTGATCAATCATCAAAACTCCTCTTTGTTGCTACAACCT ACGGCACGTGTATCTTCCCACCGCCATATTATTACCCAGAATCCTGTTGT CAAGCAGACGACAAAGGTTGTGAGGAACACTTTTTTGTCTAAATGTTGTG TGTGATAGTGGACTGAGGACGATATTTTCCTCAAAGTTTGCTCCTAACAC AACAAGGAACACATGGGCATAGTAGTATTACCATTGCTACGACATCCAGC TAACTTGCCATGAATAATGTACACGTTGCCATGACGATGGATGTTGGATT TGAGTGACGTTTTACTGACTCAACAAACGGGATGTTACCGAAGGCCTGAT GTATGTGGTGCGACCGTTTTGTCGTGTATTTATTTTTCTTTGGTCACGGT TATATGACCTTGGCACTCTCTTCAAGTCAAGATGGGAACAACAGCTGCTG TATACAAGCTGATTAGCGGCATATATTAATGACGAATCTTCTCTCCCGGA ATAATGTTCGCACCTGTCCAAGAGCACTGTCATTCTGCGTGCGGCGGACG GTAGTTTCAAGTTGAAATATTATGGTGTCAGCACGACTAGAGAGAAAATC TAACATATATAGCATTAGTGCAAAGGTAATACATGATACTGACAGAATAG CAGAAAAAAGGATGGTTTATTGTTCTGCCAGATTGATTTCAATCAACCGT TATCGGAAAAATGGCGATTTTATGTTAGCCAACGTTACATGTCCTTTTTC TTGTTTTCGTCTGGGAGGCGGGGGGTCGGACTTTTGTTTCAACTAGGTAT TTGTTCCTTTACCATTCACAAGTTTTAGTGTCTTGTCAAATATTCTATTT TCTACAATGTACAAGTGGTGTCGAGAATGTAAGCTGTGTGCAACTTGAGT ACGCCGTCACTTTGTCTTTGTCCAGTTCTTTGTATAATTTGATGTTTCTT TGAATAAGAAAAAGAAAACATGTACTAGGCCAGGTCTATGAATTAGGGTT TACTATGTATGGCCTGGCCAATATTGATCGACGGAGGAGATTCATATAGA CGAATATACACTTATCTTAACATGTGGTACTAGAGGGCGTATTGAATTCT TGTGTCTGCTGCGATCAATCGACAGCTTAACTACGCGTTTTTCTCTTTTC AGCGTGAGCGACAAGGGCGAGGTGCAGAAGGTGGTGTGCGGGAAGCACTC CCGTGACTCCGTGCTGGACGTGCCTGTGGACCAGGTCAAGCCGTTCTACC GGGCCATGCGGGCATTCGACACCATCCTGAGCCACCCCAAGAACTGCATC CGCTACAAGATGAAAGAAGGTGCGCTATGGCGTGGTCACATTCGTTGTAG GCCATGCTGTTGGCAAGGAGGCTAAGTTACTCTCCTTTCGTTTCATCTTC GATTTTAATCTTTGATTTTTTTATCTCCATGAAAAAATACTTTTTCATGG GGATATTGTTTTGAGTGTGTTTGCGTGTGTGTTTGCGTGCGTGTATGTGT GTGTCACCGGATGCTTAAAGTCAGCATAACTGAAGAACGTGTAGATGGAT TGCAGTGATATTTGGTATGTAGGTAGGTGTTGGGAGGAGAAAGGTCAAGG TCGATATTGGGCCCCCTGGTATGTGTCACTAGAACTACAATGGCGTATTT GTCAAAATCTTCTAAGGAGAATAACTGAAGAAAGGAGAAACAGATTTTGA TGTTATTTACTATGCAAGTAGCTTAGACAGAAATGTACACAATGAATTGC AAATTATGCGAATTGGGACTGAATTTGAATAAGTAATGAGGAAAATCTAC ACTTCCATCCCAGGCATGTTGTGGTACCTCACACCTGTTAGTTTCAAATC TAGGACAAGAATTCCCCAGGTCCCAACCAACGGATCCTGTACGACCGCAC AGCCCTCTACGTGACCATAGCTTAGTTATGATGAAACCAAAAAAGTAGCT TCTTAAGCACCTACTGCTATTGGCAATGAAGTTTGACCCATTTTTCCAGG TGACATGTTGGCGTTTGACAACCTCCGGATCGTGCACGACCGCACGGCGT TCAGCATGGCGGGGGGCGAGAGGCACCTGCAGGTCGGGTACGTGGACTGG GACGAGACCTACTCACGCATGCGCGTGCTCCAGGCCGAGTTGGACATTCA GGATTGA

Coding sequence (CDS) from alignment at Sc0000026:370504..379110-

>Blg00076.0 ID=Blg00076.0|Name=Blg00076.0|organism=Branchiostoma lanceolatum|type=CDS|length=1161bp|location=Sequence derived from alignment at Sc0000026:370504..379110- (Branchiostoma lanceolatum)
ATGGAGAGGGCCACCTTGGACAGTTCTTCAGAGGCGGTGGAAGTGGAATG
GTCCGCGGGAGGGGTGGACAGGTTCCCGTACATCTGGCTTAGGGACAATT
GTCAGTGCGCGGAGTGTTTCCAGGCCGACCTTAACAAACGTTTGGTTCTG
ACGTCAAAGCTGGACCTGGACGTCTCTCCCGTCCGCGCAGGCGTACAAGA
CAGAGGGAACACGCTGCACGTAACGTGGCCGGACGGACACCGGAGCCAGT
ACGGCTGGCAGTGGCTGCGGGACCGCTGCTTCAGTCCACGGGCCAGGGCG
GACAGGGAGCAGCGCTGGAGGAGAAAGAAGCAGCTGTGGGGGGCTGAACT
CTTCACAAACCTGCCCACGGCTGATTTTCCCGCGCTTTTGACAGACGACC
GAGCCTTGTACGACTTCCTGTTTCTCCTGGACACCATTGGCCTCGTTCTG
GTGCAGAACGTGCCACGTCAGGTCGGGCAGTTTCAGGAGCTGGCCAATCG
GGTGGCGTTTCCCAAAATGACCTTTTTAGGGGCGGAGCAGATGTTGAAAG
TCAAGCCCATCCATGGTAACTTTCTCATGAGCACCGCTCCACTCGGTCTG
CACACGGACCTGGCGTACTACAACTACCTGCCGGGGGTACAGATGATGCA
CTGCATCAAGCAGACGGAGTCGGAAGGGGGCGCTAGTGAGCTTGTGGACG
CCTTCAACGCCGCCTACCAGCTGAAGCAGGAGAACCCGGATGCCTTCAAA
CTCCTCACGACGGTCAAGGTCAACTTCCACAGGATAGGGATGGCCGAACC
CAAGCACCACATGAAGGAACGCCACCACATCATCAGCGTGAGCGACAAGG
GCGAGGTGCAGAAGGTGGTGTGCGGGAAGCACTCCCGTGACTCCGTGCTG
GACGTGCCTGTGGACCAGGTCAAGCCGTTCTACCGGGCCATGCGGGCATT
CGACACCATCCTGAGCCACCCCAAGAACTGCATCCGCTACAAGATGAAAG
AAGGTGACATGTTGGCGTTTGACAACCTCCGGATCGTGCACGACCGCACG
GCGTTCAGCATGGCGGGGGGCGAGAGGCACCTGCAGGTCGGGTACGTGGA
CTGGGACGAGACCTACTCACGCATGCGCGTGCTCCAGGCCGAGTTGGACA
TTCAGGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00076.0Blg00076.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00076.0-exon-Sc0000026-1570713199:378866..379110Blg00076.0-exon-Sc0000026-1570713199:378866..379110Branchiostoma lanceolatumexon
Blg00076.0-exon-Sc0000026-1570713199:378193..378286Blg00076.0-exon-Sc0000026-1570713199:378193..378286Branchiostoma lanceolatumexon
Blg00076.0-exon-Sc0000026-1570713199:375927..376054Blg00076.0-exon-Sc0000026-1570713199:375927..376054Branchiostoma lanceolatumexon
Blg00076.0-exon-Sc0000026-1570713199:374753..374955Blg00076.0-exon-Sc0000026-1570713199:374753..374955Branchiostoma lanceolatumexon
Blg00076.0-exon-Sc0000026-1570713199:374109..374214Blg00076.0-exon-Sc0000026-1570713199:374109..374214Branchiostoma lanceolatumexon
Blg00076.0-exon-Sc0000026-1570713199:373423..373622Blg00076.0-exon-Sc0000026-1570713199:373423..373622Branchiostoma lanceolatumexon
Blg00076.0-exon-Sc0000026-1570713199:371342..371508Blg00076.0-exon-Sc0000026-1570713199:371342..371508Branchiostoma lanceolatumexon
Blg00076.0-exon-Sc0000026-1570713199:370504..370661Blg00076.0-exon-Sc0000026-1570713199:370504..370661Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:370504..379110 -
Properties
Property NameValue
GeneIDBlg00076