Blg00071.0 (mRNA) - B. lanceolatum

Overview
NameBlg00071.0
Unique NameBlg00071.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:356598..358222+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00071.0 ID=Blg00071.0|Name=Blg00071.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1625bp|location=Sequence derived from alignment at Sc0000026:356598..358222+ (Branchiostoma lanceolatum)
GGGGCAAGGTACAATCAGGGGTAAAATGGTACCATGACATACTTTGGGTG ATTGCCGTCAAAAGTACGTCAGGTTTGAGTTCTTTGTAATTCTAGTAAGT CACAACAAGGTTGATAGTTCTGTAATGTTCGCCATATTTAACTTGTATAC TGCTAGTGTCCATAAGTTTGTAAAAACCCAAAGGGGCGAGTAATCCCGGA TGCGGCGTACTCGCCCCTTTGGGTTTTTACAAGTTATACTTTATAGTGAG TTTACGGCCTTAAATTAGTAACTGTTACCATATTTCTTGGAGAGACTCTT CTTAACCATGCAGGCTGATCATGTTTCCACTTTAGTGGGCATGAAGTCTA ACCAGCTATCAGCCAGTCAGAGAATCGCTTATAGCTATATTGTCCGATTC TCTGATTGGACGACAGCTAGCTAGAAGCCACGCCCACAAATGTGGAAACC TCAACCCGATTTAGCAAAGCCTCCACAAAGTATAAAACTAAAAGCCTTGG ACGAGGCTTTCCGTAGGAGAATACAACCTGACATGCCGCTCTATAGATCT TTTCTACCCCGCAGATCCTGATCACGATGAAGGATCTTGGAGAACACATG ACCCTCCTGCTGCCTCCAGGACAGGTGTCATCACACCTGTCTACAGCTAA ACACCTGTCACCTGCTGTGCACCTGTCACCTGCTGCACCTTTGGTTGTGC TGATCGGTTGGCTCAACGCTAGCCGGACTGTCCTGGGGAAGTATGCAGGT AGTTATAGAAGTCATTTTAAATTTTAATATTTGCACGTGTGTGCCAGGTG CGTGTGTGTGTATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGACAATT TGGGGCCATTTTAAGAATGTACAGGGTAAGAATAGAAGTGGAGCCTCAGT TACTAGTAAGACAACAATAACACAGACCTATCCCTCTTTTCCAGAACTGT ACACCGATCGTGGGTTCCAGGTTCTCCTGGTGAGGTCTCAGTTCAGTCAT GGCACACAGCCAGCTACTGGCCGTCAGCTCATGACAGACGTTCTGGACTT CCTGAAGAGAGAAGTCTCCTCCCAACCCATCGTTCTACATGTGGCCTCCA TGGGTTTCTACATGCTTGGTTGGATGGTGTACCTCATGAATATTCATGAG GACAAATACGTCACTGTTAGGAACAAAGTCATAGGTTTGGTACTGGATAG CCCAGTAGCTGATGGTAAAGGAGCCTTCAATGGTATGGTCGTTGGATTAA CAAGTTGGACTGTGCTACAGATGTTGATAAGGTTTGCAATCAATGTATAC TATACTTTCGCAAGACAGGTCGTCGGCAAATATGACGTTCTGACAGACAG TATCACAGGAAAGCCCATTTTGGCCCCAGTGCTGGTGCTGTATTCCATGG ACGACCAAGTATGTCAAGTAGATTCCTTGCAAGGGTTCCTGGGAAAATGG AGGTCGCTAGGGATTGAGGTAACAGAGAGGTGCTGGGAAAAGTCAGCTCA TGTAGGGCATCTGGTAAATCACAGGGAAGAATACCTGAGTGCCTTGGATG GATTTCTTGCTCGACTGCCACTGAAAAGGACTCCAAGATCCAAATTATGA ATAGATAATGCAAGACTAACCTGAA

Coding sequence (CDS) from alignment at Sc0000026:356598..358222+

>Blg00071.0 ID=Blg00071.0|Name=Blg00071.0|organism=Branchiostoma lanceolatum|type=CDS|length=828bp|location=Sequence derived from alignment at Sc0000026:356598..358222+ (Branchiostoma lanceolatum)
ATGAAGGATCTTGGAGAACACATGACCCTCCTGCTGCCTCCAGGACAGGT
GTCATCACACCTGTCTACAGCTAAACACCTGTCACCTGCTGTGCACCTGT
CACCTGCTGCACCTTTGGTTGTGCTGATCGGTTGGCTCAACGCTAGCCGG
ACTGTCCTGGGGAAGTATGCAGAACTGTACACCGATCGTGGGTTCCAGGT
TCTCCTGGTGAGGTCTCAGTTCAGTCATGGCACACAGCCAGCTACTGGCC
GTCAGCTCATGACAGACGTTCTGGACTTCCTGAAGAGAGAAGTCTCCTCC
CAACCCATCGTTCTACATGTGGCCTCCATGGGTTTCTACATGCTTGGTTG
GATGGTGTACCTCATGAATATTCATGAGGACAAATACGTCACTGTTAGGA
ACAAAGTCATAGGTTTGGTACTGGATAGCCCAGTAGCTGATGGTAAAGGA
GCCTTCAATGGTATGGTCGTTGGATTAACAAGTTGGACTGTGCTACAGAT
GTTGATAAGGTTTGCAATCAATGTATACTATACTTTCGCAAGACAGGTCG
TCGGCAAATATGACGTTCTGACAGACAGTATCACAGGAAAGCCCATTTTG
GCCCCAGTGCTGGTGCTGTATTCCATGGACGACCAAGTATGTCAAGTAGA
TTCCTTGCAAGGGTTCCTGGGAAAATGGAGGTCGCTAGGGATTGAGGTAA
CAGAGAGGTGCTGGGAAAAGTCAGCTCATGTAGGGCATCTGGTAAATCAC
AGGGAAGAATACCTGAGTGCCTTGGATGGATTTCTTGCTCGACTGCCACT
GAAAAGGACTCCAAGATCCAAATTATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00071.0-exon-Sc0000026-1570713199:356598..356660Blg00071.0-exon-Sc0000026-1570713199:356598..356660Branchiostoma lanceolatumexon
Blg00071.0-exon-Sc0000026-1570713199:357162..357345Blg00071.0-exon-Sc0000026-1570713199:357162..357345Branchiostoma lanceolatumexon
Blg00071.0-exon-Sc0000026-1570713199:357542..358222Blg00071.0-exon-Sc0000026-1570713199:357542..358222Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00071.0Blg00071.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:356598..358222 +
Properties
Property NameValue
GeneIDBlg00071