Blg00070.0 (mRNA) - B. lanceolatum

Overview
NameBlg00070.0
Unique NameBlg00070.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:402837..406589-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00070.0 ID=Blg00070.0|Name=Blg00070.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3753bp|location=Sequence derived from alignment at Sc0000026:402837..406589- (Branchiostoma lanceolatum)
ATGTACGAGCAAGCAGAGCCGGTCCGCTCCCCTTTCTCCGACCCCGGCAG TAGTCAAACCAGCGGGCCGCCGCCCCAACCCCCTCCTGTCCATCAGAGTG GCTCACGCGGGCGTGGCCGCCATGGCAACGGCGCTTCCGACAAGTTTCAG GAGGAGAAAGAGGCGTCTTCACACACGTACGAAGTAGCCGAGGCGGTGAA AGGCTACGCAAATGCAGGTAGCCGACGCTTTTGTAACGTGTTTTAACGTA TTTGTACAATAAGAAGACATAATCATGTCCGGTAGAGATGGTGAATTTAC GCATCATTACTTGCTTTGCAGTTTGGACAATTTGATGATAATGTCGTTGC AATTGTAGTAATCATATTCAATGTTGATGAAGTGAAAATAGATTCCCTCT TGCCGCATATGTTTTAATTTTGGTTCTGATAGATTTAGTTTGAAACAGCA TTGCCTTTAATTATACTCGTCAGCACCGTTATATCCGCATTTAATAATGT GGAAAATATATAGACTTTGCTCGTCTAGAATCATATCGCTCGAGCTCTAT AATGGCGATTTGCACATTCTATGAGTGTAATTTGACATCATCAGTCTTTA TTTTGTCACTTAATAATGTTCACGCAGTTAAGCTTTCGCTGCAAACCCGA CATGTTCATTGTTTCATAAACAAGTCAGTACTACTTCTACAAAAACCGAG GGACTTCGTTTTATTTCATCACCGTGAACCTGGGGGACAAATATATCTTT AACAGATCGCACGTATCCGAGTGGAGCAAGCGGGCGCCGTGCTCTCTGTA GCTTCATCTGNCCGTGCGCTCTTTAGCTTCATCCGCTCTCACCGCAGCTG CATGGCCGCCGGTATCGCGGTGCTGCTCGCTGTGGGACTCGCCCCTCTGA CGTTCATCAATATAGAGGTAAACAATCTTGTATTCCAAATGCAGTTTTAA AACTATTCTTTTCTGAAACTGTCCTTTGACTGAGACTGCGAATGTCGAAT TTTTGCTGTTTCAGTCATTTCTTTCTCGTTTGATATTCTGACGTACCTCT TTAGGAAATATCCCTACTGTCCACCACTGTTGACGCCTTGAAGCGCGACC AAGACGACTTGTCCACCACTGTTGACGCCTTGAAGCGCGACCAAGACGAC ATGCGCCAACTGTCCACCATTCTTGACACCTTGATAAATGACCTGGACAA GGTGCGAAGCCGAACCGCCGCCTTGGAGCAGCGTCTTAACGAGATGAATA AGAAGCCACGTAAGTTAGTTTTCAGTTATTACCTTCGCCGAGAAGGTTAT GCAGAGGGTAGCGTTTGTATGTATGTATGTTTGTAGTGGCACAGCATAAC TCAAGAACGCCTTGATGGACTGTCTTGGTATTTGGTATGTTGGTAGGTTT TGATGAGACTTGAAAACGATTAGATTTTGGACCCCCTAGCGGCTTCTTAC GGTACTGCAGTGGAACTTCCTGTTTTGATATCTCCTGTTCTGGACATGCT ATGGAACTGATTTTTTAGTGGTAGATAGATCTTTGAACAGAGAGTAAGTG GTATGGGTTTGGGCCCCCTAGCGGCTTTTTTGGAACTGCAGGAGCAGGTT TTGCGTCTGACTTTGAAAAAGAATAACTCAAGAAGGGCTCGATGGATAGT AATGATTTTTGGTAAGTAGATAGCTTGAGTGATGATGTACATGATTAGAT ACCTCTTATGCAAATCACTATTTAATTTGCATAATTAATGAGGAAAGTTT GTACATCCGCCAAATTCCATGATAGGACTTTGAAACATGTGTCCATATGT AACTGAGGAAGAGAGAAATATTAATTGATATGAACTATGCAAATGAAGAC CTCATTTGCATGATTAATAATAAATACTATAACAAGATGGCCTTCATGGA TGGTCATTATTTTTGGTATGTTGATAGCTTGTGTGATGCTTAGTATGGTT GGACGATAATTATGCAAATCAGATTCTTATTTGCATAATTAATGAGGCAA CTTTAAAAAATCTGCTTTGTTCCATGATATGACTTCAAATTGTAACTGAG GAAGAGAGGAATGTTGATAGATAGACAATATACAAATGTGGGCCTAATTT GCATACTTAATGAATAACTTCTATAATTCCTGGCAAATGACGGAAATTTC ATACATTTAATACTTTTTTTGTGGCATCGGGAATTTATGTGAGTGTGAAC ATCGTTGAATAAAATTATGCTAATAGGGGCCTCATTTGCATAATTGATGA TAAATATTAGCATAACCTTCTTTGTTAAGCTCATAATTTTCATTGTACTA TTTGTGATGTCATATTGGAAACAAATTATTATCATTTGCATAAAAACAGC TCCCACGTGTTATTGTGACATTTATAACCATACTGTCTCTTTCATCATAC ATACATATGTTACTGATACATACCACATGTACCAACTATACATCATAAGG GGAGATCTAGTCTTCTGAGGAAGTCAACGTAATAATCTGTGTTCGTTTTT CACATTACCCATACCCTATTCCTTCTTGGCCTGTTGTTTTCCAGCATCTT GTCCTGAGGGTTACACAATATGGCGTGGAATATGCTACAAAGCCTTCGAC ACCAAGAAGACCTTCATCGGAGCGGCCGCGGCCTGTCGTGAAGACGGCGG CACCCTCGCCATGCCCCGAAACTCCGAGACCAACGCCTTCCTGGCCTCCT TGTACAAGTCCGTGCACTTCAACGCGCACTTCTGGTTCGGCCTGCACGAT CGGCGCAAAGAGGGAAGCTTTGAGTGGGTGGATGGTTCTGCACTTGGGAC ATACAACTCCTGGGCTCCAGGACAACCGAACAACTTAAATGGCAACCAAG ATTGCGTTCGTTACTCCACATTCTCTTCCCGGAAACCCAAGTGGGACGAC GCGGCATGCAACTGGTCATTTTACTTCATATGCCAGGCTGTTCCAGGTAC TTCTTATAACCATGCCATTTCTGAAACACATTCATCTAGTATAGACATCA CAGCTTAAATATACATCTGAATAAGCACCTCTGATAACCAGTGCGAAAAA CTAGACAAACGCCATTCCACATCTCATCTCTGCTCATTTTTCCAGGACGT CCATAGACGACAAGCGGAACTCTCGCCACCGCTGTACAACGGCTCTCCGA CCATCTGCAGTGGAACTTACCAGTAAAACGTCAAAACTAGAAATATATAT TGCAGTGGGCCAAAACGGCATTTTTTTCTCAAATGATCTTAGGAGTTTGA TCTTCATAAATAGTGGAGGCGCACCAAAGCAATACTTTACAATGGTAGTT ATGCCTCAGTTTTCGTGTAGAAAGAATTTACAGATGTTTTTGCAGGTCTC AGTTATTATTTTCGGGACGGCAGGAATCAGAAAGGCAGAAGAAATCCTGT CAGGAAAATGTATATTCTTCGTACGACTGTAGATCCGGCTGTGCCACCCT GCATTCAAGTCTTCAAACTTTCTGTTTAACTCAAGACGCTAATGAAAGAG CTTCTGTCATGTTTGGTTCAGGTGGATAAGTTTGAGGGTTGTCTAAATTT GAAAGGAAACTTACTGTTTGTCTATTTGCAGGGTGAGAAAATCTTCAATT GCCTCTTTGAAATATTAAATGAGTGTATCAGGTGGTGTTTCTGATTTAAT ACCAGATTTTCAGATTGTTTAGTAATTTTCTGATGTATACCAATTTTAAG ATTGGATAATGATTTTCTGATTGTACCTTAGTTTTCAGATTGTCGTTTTT TAA

Coding sequence (CDS) from alignment at Sc0000026:402837..406589-

>Blg00070.0 ID=Blg00070.0|Name=Blg00070.0|organism=Branchiostoma lanceolatum|type=CDS|length=876bp|location=Sequence derived from alignment at Sc0000026:402837..406589- (Branchiostoma lanceolatum)
ATGTACGAGCAAGCAGAGCCGGTCCGCTCCCCTTTCTCCGACCCCGGCAG
TAGTCAAACCAGCGGGCCGCCGCCCCAACCCCCTCCTGTCCATCAGAGTG
GCTCACGCGGGCGTGGCCGCCATGGCAACGGCGCTTCCGACAAGTTTCAG
GAGGAGAAAGAGGCGTCTTCACACACGTACGAAGTAGCCGAGGCGGTGAA
AGGCTACGCAAATGCAGTGGAGCAAGCGGGCGCCGTGCTCTCTGTAGCTT
CATCTGNCCGTGCGCTCTTTAGCTTCATCCGCTCTCACCGCAGCTGCATG
GCCGCCGGTATCGCGGTGCTGCTCGCTGTGGGACTCGCCCCTCTGACGTT
CATCAATATAGAGGAAATATCCCTACTGTCCACCACTGTTGACGCCTTGA
AGCGCGACCAAGACGACTTGTCCACCACTGTTGACGCCTTGAAGCGCGAC
CAAGACGACATGCGCCAACTGTCCACCATTCTTGACACCTTGATAAATGA
CCTGGACAAGGTGCGAAGCCGAACCGCCGCCTTGGAGCAGCGTCTTAACG
AGATGAATAAGAAGCCACCATCTTGTCCTGAGGGTTACACAATATGGCGT
GGAATATGCTACAAAGCCTTCGACACCAAGAAGACCTTCATCGGAGCGGC
CGCGGCCTGTCGTGAAGACGGCGGCACCCTCGCCATGCCCCGAAACTCCG
AGACCAACGCCTTCCTGGCCTCCTTGTACAAGTCCGTGCACTTCAACGCG
CACTTCTGGTTCGGCCTGCACGATCGGCGCAAAGAGGGAAGCTTTGAGAC
GTCCATAGACGACAAGCGGAACTCTCGCCACCGCTGTACAACGGCTCTCC
GACCATCTGCAATTGTCGTTTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00070.0Blg00070.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00070.0-exon-Sc0000026-1570713199:406373..406589Blg00070.0-exon-Sc0000026-1570713199:406373..406589Branchiostoma lanceolatumexon
Blg00070.0-exon-Sc0000026-1570713199:405673..405818Blg00070.0-exon-Sc0000026-1570713199:405673..405818Branchiostoma lanceolatumexon
Blg00070.0-exon-Sc0000026-1570713199:405331..405535Blg00070.0-exon-Sc0000026-1570713199:405331..405535Branchiostoma lanceolatumexon
Blg00070.0-exon-Sc0000026-1570713199:403817..404045Blg00070.0-exon-Sc0000026-1570713199:403817..404045Branchiostoma lanceolatumexon
Blg00070.0-exon-Sc0000026-1570713199:403431..403494Blg00070.0-exon-Sc0000026-1570713199:403431..403494Branchiostoma lanceolatumexon
Blg00070.0-exon-Sc0000026-1570713199:402837..402851Blg00070.0-exon-Sc0000026-1570713199:402837..402851Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:402837..406589 -
Properties
Property NameValue
GeneIDBlg00070