Blg00065.0 (mRNA) - B. lanceolatum

Overview
NameBlg00065.0
Unique NameBlg00065.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2556820..2559606+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00065.0 ID=Blg00065.0|Name=Blg00065.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2787bp|location=Sequence derived from alignment at Sc0000026:2556820..2559606+ (Branchiostoma lanceolatum)
ATGCTGGTACTTGAAAAAATCTCCCTCGTTGCAATTTTGGGGCTGTGTAT TCTAAGTCTTCGTGCGGACGGACAAGGGGTTAAGAGAGGGTGCTCGGCAA AAAACATCAAGAAGAATTACCGCCACTTCGCCAAAATACGAGACAGAGTC AACAACGTCTTGAGGCTTGTGACAGGGGTGTCCGAAAAGGTGAGAATCTT CCGTACTTATTGCCCAATATTGTCAAGACATTTCATGAAATTTGTACGGC AAGATCTTTGACAAGGTAAGATGTTAGACACCCGAGTATTACAAGTATTA CAAGTATTACAAGTAATTTTCAACAGACGATGTTGCGTTGGTGTCATATT TATACTATTTACGACGGTAGGTTGGCCGGGATTCGAACTCGGGATTTTGT GGTTCTGTAGCGGGGTTAGTCAGTCTCTGCTAGACTACGACTGACTACCA GAATACGGGACTGAATAAATCGAAAGATAGAGACTGTTACTGAATGCAAA ATCTATGACAAACACAATAGCTGTGTTCACTTCGACGTTTTCTTCAACTG TGGTTTCCATTTCCTTCCTTTCTAACTGGTAAACATTTACACGGAAATGA TATTTTGTGACACAACCTAGAGTAAATTTTACCTGACCGACGTTTCGGTA ACTCTTCAAATACCTTCCTCAACGTCTGATTAGTCTCTACTACTCCTTAC TGCATACATGCAGGTGTTGGGGTAACGATTCGGTCCCAAACGTAGCTGAG TCTAATGATGTTTCATTTCAAATTACATTACAGGTAGATGATCAGATTAA TCGGGAGGACAGGGCCTCACGAAGTTTGCTACTGCCCAAAGTGGGAGATC TACATTTTGAAGACAGTTTTGTTTTCTCGGGACTAAGTCTTAAAGGACTG AAGTTAACAGATGCAGGCCTGGACGTAAGTGCACACATCTCATTATTACC AAAACGGAAATATTTTGTTTTCTTGTTCGTCTTTTCTTTTTCTTTGCACT ATATTGCTAAGGCGTAACACACCAGTTCTGAACGTTAAGTACAAGCTTCG CGAGACCACAGTGATAGGGTTGATCCTCTATCGTTTATTTTAAGTTATGA TGAATAAGTCCCATGTGCTTGTCCTAAAAAAACTTTAAAGGGGTGTGGGG TTGTGGAACTCACGTATTTAGATTCAATTGTGCTAGGGACATGCTACACG TAGGCATTGACACAATAATTGTTTTCACCCCCCCCCCCCCTTTTAGCTGA TTCAAACTTGTATATCAAGAATAACGAACAGCATAGAGCACATCTATAGA TAGAAATGTACAAAGTACCACACAAACTATAACAATCATTGTCATTGTTT ACAGGACATAGAAATGTTTCAAATCTATATGGCAGAGATGGAGGCTCTCC TCAACGAGCTGAGCAGGGTAGAGGAAACGGTGGTGGATGACGTCATTGAG ACGTTAAGTCACGTGACTGAGGACGAGTTGTCCGTCCAGAAAGACCTTAA GGACCGTCTTCCAATTCTCCACAAGTATTTGGAGGAAGAGCTTCCAATAC TCCAGGAGTATTTGAAGGAAGTTCACGAGGATGCATCTGAGTTGGTGAGT ACAACATATTCTTATCAACTTTATTTTCAGACATATTTCAAAACTAATTT CGAACGAAAGTGGCCTAAACTTAGTCATGTATAAATAGTTGTAACGGTGG CGCTAGCATTAGAAGTAGATATAATAATCACTAATATAGTTTTCGAATAA CTGTTTTGCTTTCATTGTTATGTATGCATATAACGTATAATTGTACAAAG TACAATAATTTTTCTCATTATCCCCGGGTGAGATTGCACAACTTAGTTGC AAAATTGTTACAGACGTGAACTTTACCGAATCCATTTAATCGTTCCTTTG TCATTTTTCATTGCAGATGGGGAAAATTAAGACATGTGTATTCAACGGGG ACACAAACGTGGACGCACTGATCGATCAATACAAAACACAAATCGAGTCT GCGCGACCGACGGTGAGTCAAGTTGTTCATTAATATATTCATATAGCCTT TGGTTTGACTATTAGGGACATACAGATCAACTAGTCCGTGGCTATTACAA ACTTAATACAAAGCACATAACAGGACCTAAAAGTCAGGATGTTTGACATG AAACACTAAGACAAGCGCAAATATCTAAAAGTACTTACAGTATACTAGTA AGACAATAAATGATAAATACAAATACAAAACAGTAAGAAGTTATATTAAG CCTCAAATATGATAAGCTAACGTTTGAACTTCATGTGAATCTGCATTTGT GATATTATAACTATAAAATTCGACCCTCAATTCTTTTTTACATTACGTCA TATTTTTAGCCTTCAACGGCAAATTCTCATGATATTTACATATTTGCAGT TTATAGTTCATCAAGGGCTCCTATCGAAGACATAGATCAGCTGTAAAATC CGTTTTGGTACGTAATAACTCTGACCAACCAGAATAGACGATGCTAATTA TATTATTACATTTTCTTACCTCACGGCAGGTTGCAACGAGGACTCGGCGA GATGCACAGGAACACTCCGCCAGCTCCTCCATCTTGCTTCGGAAGATCCG GAGTCTGGTTGGCAGTCAGGCACCAGGGGCAGGGGAGAGAATCCTCCAAC ACAGCCAGTGGGTCCTGCAAGATCTACAGAACCTCCTCCAACACGACGTC ATCTCAACACTGGACAGCATGGCCAACAGGAGGGGAAAAGGAGGAAGGGG ACAAGGCCGAGAGGAGGGGGGAAAGCGGTCAGATTAA

Coding sequence (CDS) from alignment at Sc0000026:2556820..2559606+

>Blg00065.0 ID=Blg00065.0|Name=Blg00065.0|organism=Branchiostoma lanceolatum|type=CDS|length=783bp|location=Sequence derived from alignment at Sc0000026:2556820..2559606+ (Branchiostoma lanceolatum)
ATGCTGGTACTTGAAAAAATCTCCCTCGTTGCAATTTTGGGGCTGTGTAT
TCTAAGTCTTCGTGCGGACGGACAAGGGGTTAAGAGAGGGTGCTCGGCAA
AAAACATCAAGAAGAATTACCGCCACTTCGCCAAAATACGAGACAGAGTC
AACAACGTCTTGAGGCTTGTGACAGGGGTGTCCGAAAAGGACATAGAAAT
GTTTCAAATCTATATGGCAGAGATGGAGGCTCTCCTCAACGAGCTGAGCA
GGGTAGAGGAAACGGTGGTGGATGACGTCATTGAGACGTTAAGTCACGTG
ACTGAGGACGAGTTGTCCGTCCAGAAAGACCTTAAGGACCGTCTTCCAAT
TCTCCACAAGTATTTGGAGGAAGAGCTTCCAATACTCCAGGAGTATTTGA
AGGAAGTTCACGAGGATGCATCTGAGTTGATGGGGAAAATTAAGACATGT
GTATTCAACGGGGACACAAACGTGGACGCACTGATCGATCAATACAAAAC
ACAAATCGAGTCTGCGCGACCGACGGTTGCAACGAGGACTCGGCGAGATG
CACAGGAACACTCCGCCAGCTCCTCCATCTTGCTTCGGAAGATCCGGAGT
CTGGTTGGCAGTCAGGCACCAGGGGCAGGGGAGAGAATCCTCCAACACAG
CCAGTGGGTCCTGCAAGATCTACAGAACCTCCTCCAACACGACGTCATCT
CAACACTGGACAGCATGGCCAACAGGAGGGGAAAAGGAGGAAGGGGACAA
GGCCGAGAGGAGGGGGGAAAGCGGTCAGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00065.0Blg00065.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00065.0-exon-Sc0000026-1570713199:2556820..2557008Blg00065.0-exon-Sc0000026-1570713199:2556820..2557008Branchiostoma lanceolatumexon
Blg00065.0-exon-Sc0000026-1570713199:2558174..2558413Blg00065.0-exon-Sc0000026-1570713199:2558174..2558413Branchiostoma lanceolatumexon
Blg00065.0-exon-Sc0000026-1570713199:2558736..2558831Blg00065.0-exon-Sc0000026-1570713199:2558736..2558831Branchiostoma lanceolatumexon
Blg00065.0-exon-Sc0000026-1570713199:2559349..2559606Blg00065.0-exon-Sc0000026-1570713199:2559349..2559606Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2556820..2559606 +
Properties
Property NameValue
GeneIDBlg00065