Blg00062.0 (mRNA) - B. lanceolatum

Overview
NameBlg00062.0
Unique NameBlg00062.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2509023..2510465+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00062.0 ID=Blg00062.0|Name=Blg00062.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1443bp|location=Sequence derived from alignment at Sc0000026:2509023..2510465+ (Branchiostoma lanceolatum)
AGATGCGCTGGTGTAAGGAATGCATGTCCGCAGAAGGTCACGATGATGAA
TGTAGAACGTGCGTCTTGGATACAGCCACTGGGCACATAGTGGGAATCAA
GGTATGTCTATTTCAACTCATCAAAAGCTTGTTCGATATACGTGTTACAT
GTTTTATGAAAGGAGGTAAACTTGAAAAGGATCTCGGTCCGGTTTGATAG
TCGGCCCATGCCCTCATAGTTACTCGCCACCAAACGCCAGATCAGGCCAT
CGAGATTGATTAGATATGTCCTGACTCAGGTTTAACCCTATCTAGACTGG
GCTTTTTTGGATACCTGGGACGGGGGGGGGGGGGTGGCGGGCTCATTCGC
CCTCCTCAAAACTTCCGAACGGTATGATATATCATCGCTAAATTAAAAGG
GAGTGAAGTAGACGTAAAGTTTTATTAATTTGGGTGACGTTATGACGTAA
AATGACGTAATTATGACGTCATTGATGTGATTTTATTGTCTAGATAAAAA
ATAAGAAATATCATAGTTTAAAAACAACTGGTGATTTTTGCCAAAAATGC
TTGTCAGAAACCCCTTGACATGGCAACACGAAAAATGATTAACTTATACC
ATTATCATAATATTGTTGGCAACTAAATTGCAGGAAAAGTCACCAGGTTT
TTGACTGGTCACTGGAAAAGTCACCAGTCTAAATAGGGTTAACAGCTCAA
CATAATACATTGTCAGGGACAGTTGAAAACTACATGTCATGCAGATATGA
AATATATTTTGATGATTTGTAGTATGGTTCTATAGAAACAAAATCACGAC
CAAAATTGGTGTGTTTTCTTTCTAAATGAGGATTGTAAGTTACTAATAAT
AAAACAGTCAAGCTCTTGATTTTTCATGTTAGCTGGTGGAAGCGTTTCTC
AAATCGGCAGCAAGTAAGGAAATAGCAGAATATGCGAAAAGGACACTAGA
AAAGGTTGTGAAACTGGAAATCGAAAACTTGGCAAAGGAAGCTGTGAAAC
AAGGTATTATGTCAATCCTATTTCAGCTGATACATTTTATGTAAATATGT
CAGATAAACATTGTAAACATGATTCAAGAAATGAAAANTATGTAAATATG
TCAGATGAACTTTGTAAACACGATTCAAGAAATTAAAGATGAATAATTAG
AATCACTCCTTAAACGATGGAAATTAACCAGCTAGCCAGTAGTAGTAACG
GTAAAACACTATATACTATTGTAGACATATTTAACGATGGGTAAATTTAA
TATCTACCTCCTTCGAGAAACAGTTTGCTACATAGATTCATGCAAATTTT
GATATGTTAATTTTGTTCTGATCTTGCAGAGGCCCTGGCTCTAGCGGCCA
TCACCTCACCATGGCAGTGGACACCTATTGTAGCTGAGTTTATCATGTAT
CATGTCTCCAAGGCTGTTGGTGCATCTGAGAAGACGCCCGCAA

Coding sequence (CDS) from alignment at Sc0000026:2509023..2510465+

>Blg00062.0 ID=Blg00062.0|Name=Blg00062.0|organism=Branchiostoma lanceolatum|type=CDS|length=336bp|location=Sequence derived from alignment at Sc0000026:2509023..2510465+ (Branchiostoma lanceolatum)
AGATGCGCTGGTGTAAGGAATGCATGTCCGCAGAAGGTCACGATGATGAA
TGTAGAACGTGCGTCTTGGATACAGCCACTGGGCACATAGTGGGAATCAA
GCTGGTGGAAGCGTTTCTCAAATCGGCAGCAAGTAAGGAAATAGCAGAAT
ATGCGAAAAGGACACTAGAAAAGGTTGTGAAACTGGAAATCGAAAACTTG
GCAAAGGAAGCTGTGAAACAAGAGGCCCTGGCTCTAGCGGCCATCACCTC
ACCATGGCAGTGGACACCTATTGTAGCTGAGTTTATCATGTATCATGTCT
CCAAGGCTGTTGGTGCATCTGAGAAGACGCCCGCAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00062.0Blg00062.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00062.0-exon-Sc0000026-1570713199:2509023..2509123Blg00062.0-exon-Sc0000026-1570713199:2509023..2509123Branchiostoma lanceolatumexon
Blg00062.0-exon-Sc0000026-1570713199:2509905..2510025Blg00062.0-exon-Sc0000026-1570713199:2509905..2510025Branchiostoma lanceolatumexon
Blg00062.0-exon-Sc0000026-1570713199:2510352..2510465Blg00062.0-exon-Sc0000026-1570713199:2510352..2510465Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2509023..2510465 +
Properties
Property NameValue
GeneIDBlg00062