Blg00056.0 (mRNA) - B. lanceolatum

Overview
NameBlg00056.0
Unique NameBlg00056.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1231571..1233596+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00056.0 ID=Blg00056.0|Name=Blg00056.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2026bp|location=Sequence derived from alignment at Sc0000026:1231571..1233596+ (Branchiostoma lanceolatum)
ATGGCACAGGGGAACAGATCACATGGTAGCGACTTTGACGATGTCGTTGT GAGGATGGAAATCGAAGAAAATCATTCCGTAGGAACTGGGGCACAAGGGT ACTACCGTCCACGCATAGGTATGTTAAAAATAAGAAATATATCATGGACA TGGGTAGATTATAAGCCCATTTATATGTTCAAGACCCTACTTAGGGTTCC TCAATCCAGCATTTGCCGAGCAGTTGGTTATTTCATTTTATGATTCTTGT ACGATTCTTGTAAGTTTAAGGTTGCTAATTGTCACCAATTTATGCAGCAG TATATTTTTGTGTGTGCAAAAATACCCCAACTTTTTAGTCAAGCAGAATA GAGTCTCTTTCAACCGTATTACATGTGTTAACAAAAGCAGTAGCATGAAA TTTCGTCTGTGTTGGTAAATGACATAATATGAAACAAAAGCAGTAGTATA GAAATTCTAAGTTAGGGAACCGTGACTTATAACTTGTTTGAAAAAAAAAA AAAACCATGTGGCATGGGATGATATCTGCATTTCGTACTTGCTAGCTTAA TATACACTACAGTGCAAATCTATAAAGCAAGCAGCTGATGGAACGTTGTT GTTGTTGTTGTATTGTGAAATGTACGTTTAAAAGTGTTTTTTTTTACAAT CATGTTTTTCTGTTTCAGAGCCCGTATATCGCAACTATTACTACAGCGGC GATTCTGGTAAGTTTGCTACAGATCATATTGTGAAGACGTATTATCATAA TCTCAGTTTCGCCTAAGCCCGCTTTGGAGATTAATTGCCGGTAATTGTCT TTTACCTATGGACATGAGTCAAACTAAGATTGGCAGGTTTATCTAAAGCT TTCCTGACAAATACATTTTGAAAATGACTTGAATTTTTACTACAACGACC AGGCTTTATGTAGTTAATCGTTACAATACTAGAGTAATTTGTTTTTCATA GTTTCGGTCACAAGACACGCAGGCGCACTAGCGCGAAGGGAAATATAAAA CTGCTCTGTGAAATTTGTCGATTTCACAATCTGCAAGATGTCACAGCGTA ACAAGAGTCATGGGAGTGACAGAAGTGGTATATAAGTCTTTAAGTATGGT TGGCAACAACGTTTATAGAGCTGAAATACGGAAGAATTTCACGTAACAAA ACTTTATATCTATTTTACTTCTCTCTCAAAAAAGTTCTCAATGAACTTCT TGTCTTTTTCTTTCAACAGGCTGGGACTGTTTCACAGACAGCACCAAAGT CCAGCTCCGTGATGGCCGTAAAATCGCCATGAAGGACCTGAAGCCCGGGG ACTGGGTCAAAGTCGTGAAGCCTGATGGCCGAATCGTGTACAGCAAGTTC ATCGCCATGCTTCACTACGAACCAGACGAGAAAACGACCTTCCTCCAAAT CTACGTCGAGGGAAAGAGTGGACCAATTTGTTTGACTGCCAACCATCTGA TTTACGCCACCAAGAGCCACGCACAAGCAAACATCGGTAGGTTTTTCTCC ATATCATTTACCCTAGGGACTATTTGAGGGTTTTGTTCGCAGGACACGGT AGCTGATATTTTCCCGCTTTTGGATAAAACAAAATGGCGCTTCTTTCCCA TGCTTTCTCCTTTTATAAGTCGCTAAAACTGCGTTATTTCCCCCACTAGG GCGTCCTGTTTTTGCCAAAGACGTGGAAGAGGGTATGTTCGTCTTTGTGG CCAACGAGGAAGGCAAAAAAGTGGTCCCGACTGAAGTGCTCGAGGTCCGA GAGACTGAAGCAACTGGATTCTGCGCCCCGCTAACTAAGGAAGGAACCAT CATGGCGGACGGCGTGGCGGCCTCGTGCTATACCATTGTTGACCACGAGA TCTCTCACAAGGCCTTCTGGCTGCTCCGTCGCCTGGACGGGGTTAAGTCA GCCCTAGGAGGCGTTGGGAAAGAGAGGGAGGTGGCCACAGTTGGCATCCA CTGGTACCCCAAAGCTCTGATGAAAGTGTACAAGTTTCTGTTCCATGTTC AGCCTGCTAGTACTACAGCTATGTAA

Coding sequence (CDS) from alignment at Sc0000026:1231571..1233596+

>Blg00056.0 ID=Blg00056.0|Name=Blg00056.0|organism=Branchiostoma lanceolatum|type=CDS|length=801bp|location=Sequence derived from alignment at Sc0000026:1231571..1233596+ (Branchiostoma lanceolatum)
ATGGCACAGGGGAACAGATCACATGGTAGCGACTTTGACGATGTCGTTGT
GAGGATGGAAATCGAAGAAAATCATTCCGTAGGAACTGGGGCACAAGGGT
ACTACCGTCCACGCATAGAGCCCGTATATCGCAACTATTACTACAGCGGC
GATTCTGGCTGGGACTGTTTCACAGACAGCACCAAAGTCCAGCTCCGTGA
TGGCCGTAAAATCGCCATGAAGGACCTGAAGCCCGGGGACTGGGTCAAAG
TCGTGAAGCCTGATGGCCGAATCGTGTACAGCAAGTTCATCGCCATGCTT
CACTACGAACCAGACGAGAAAACGACCTTCCTCCAAATCTACGTCGAGGG
AAAGAGTGGACCAATTTGTTTGACTGCCAACCATCTGATTTACGCCACCA
AGAGCCACGCACAAGCAAACATCGGGCGTCCTGTTTTTGCCAAAGACGTG
GAAGAGGGTATGTTCGTCTTTGTGGCCAACGAGGAAGGCAAAAAAGTGGT
CCCGACTGAAGTGCTCGAGGTCCGAGAGACTGAAGCAACTGGATTCTGCG
CCCCGCTAACTAAGGAAGGAACCATCATGGCGGACGGCGTGGCGGCCTCG
TGCTATACCATTGTTGACCACGAGATCTCTCACAAGGCCTTCTGGCTGCT
CCGTCGCCTGGACGGGGTTAAGTCAGCCCTAGGAGGCGTTGGGAAAGAGA
GGGAGGTGGCCACAGTTGGCATCCACTGGTACCCCAAAGCTCTGATGAAA
GTGTACAAGTTTCTGTTCCATGTTCAGCCTGCTAGTACTACAGCTATGTA
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00056.0Blg00056.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00056.0-exon-Sc0000026-1570713199:1231571..1231688Blg00056.0-exon-Sc0000026-1570713199:1231571..1231688Branchiostoma lanceolatumexon
Blg00056.0-exon-Sc0000026-1570713199:1232239..1232277Blg00056.0-exon-Sc0000026-1570713199:1232239..1232277Branchiostoma lanceolatumexon
Blg00056.0-exon-Sc0000026-1570713199:1232790..1233056Blg00056.0-exon-Sc0000026-1570713199:1232790..1233056Branchiostoma lanceolatumexon
Blg00056.0-exon-Sc0000026-1570713199:1233220..1233596Blg00056.0-exon-Sc0000026-1570713199:1233220..1233596Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1231571..1233596 +
Properties
Property NameValue
GeneIDBlg00056