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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000368:3817..13410+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00048.2 ID=Blg00048.2|Name=Blg00048.2|organism=Branchiostoma lanceolatum|type=mRNA|length=9594bp|location=Sequence derived from alignment at Sc0000368:3817..13410+ (Branchiostoma lanceolatum)
ATAAGTCATGCAGATGATAACCTTATTTCCATGATAAACGAGAAGCATTC
ATAATACATCATTCGAAAAGGTTGAAATCATTTGGCGAAGGTAAGAGGTC
GTGGAACTCTGTTGTGATTATCATGATTAGCACTTTTTACTCTCTACTGC
ACTGCGCTTACATTTACATTTTCAAATCTGTAAATGTCTACATCACAAGA
CTTCCCACATATGGACAGCTTGGCTATGACGCTAACATGTACCTTTCCTG
TAGAAAATAATCATCCTGATGATTATCAGATACGACTTTGCTGTGCAATT
GATCAGCTACCAGCTTTTTATTGTGATTCATTTCTCTATGCTGTTTGCAT
TTTTCTTTTATTCTTTATGACAAAGACAAAATAGTTGTCTTGTCTCCATG
AACGTAAACAAAAATGGCAGGGCATCGATTAAAACGGGCGTCTTGCCTTT
AACTCAAAACGCTTGTAAATCTCTTGGTCGTCATGAAGACTGCAACAAGT
TCATTTTGGGTGGTCATCCTTTATCTGTCGCCTTGCATGGCTAACTTGCA
GTAACTTGCTCTTCACCTTGGCACATCCTGGCCAACAGTATGCCTCCCTA
TGACAGACGAGTGTTTCGTCGAAGCTGCTCTGAGGAGGGCCTCTGGGAGG
GACCGACGTGTGACCGTGTCAAGTGCAAGTCGCCCCCACCCATGTTCAAG
GGTCTGTACAACTGCACCAGGGGGCTGGACTACCAGAGCAGGTGTACTTT
GAAATGTGGAGAACATGATAAGGTACACATGTCAGACTCTTTTGTTTGTT
CTCAAAAGACATTCCATTTCCTTGGTACATTGGTAATGGGTAACTTGGGG
TCTGGATGCATCACAAATGCTGCAAAATAACAGAGATTGAAAGATACATT
CACGTAATGGCAGCAGTCTCAATGATTAAGATTGGGGGATTATGGAAAAA
CGCATGTTGGAGAACCCACAAATTGCAGTGCAAGACAAAACTATTGAGAT
TTCATGTTGTAGCTAGTGTATAACCTGATGGCATTTTCATCCGTTTGCCA
TGTGTTTTTTTATTAACTGCAAAGTAGCTGCCAATATAAAATGATTAATT
AGAAATCGTTAGGAGCTTAAGAGCCAATGTCTGTAAGGATCAAACAATAG
TGCTCACGGTCAAAAAGTCGATTTGGCTCATATTTTGCACAGAGATAGTA
CTTGGCCCCCAACCCCTGAAAATAGCTTTCTTTCCGCTCAACACCCATCG
TTGCCATGGCAACGGCCCAATCAAGTTTTGGGGCCATTTTGACAGATTTG
TGTATGGCGACAACATGGAAATTGGCAAAGTTTAGAGCACGCTCACTGCC
AAATGCTTTATTGTAGCGCAAAACTGAATAGGATCTTTTTAGACCAATGC
TTAAACTTTTAGAAAAATGCTGTGAAGTTGATGTAAAGATACATTTAAGC
ACTTGGGCATCCTCAAAACAATATGATGTTTTAAGGCTACAAAAAATTGT
CATTTTTGCCGAACTTTGAGACGCTGAAATTTGAAAGACAAATAGATACA
TCAAATAGCTACTGAATGAATGCTTGCAAAGCTTGGGTTCTTGTTTCAAT
AGTCTGTGGTTGCTACTAGAAGTAGGTCACTTTTCGTGATTTCATTAAAA
ATGGGATTTTTGCAAACTTTAAAATACAATATCTGACAAACTAAGATGTT
TCTGTAGTTCATTTTCCTGTCAAAGGTAGACCTTATTGTTGTCTATAGAA
TGCATGCTAGCAAAGGTTTCGATAGTTTTCCTTGCCGTGAACTTGTCCCT
GAAAGTAGGTCATTTTTTAGACATGTCATCAAATGTGGATTTCTGGCTGT
CTTTCAGCTGATGAAAATGCCAAAATTAGATTTTATTCCGGCTCAATTTT
TTTGTCAGATGTTAACCTTATTGTTGTCTATCAAATGAAAGGTTTCAAAG
CCTGGGTTCTTGTTTCATAGATGTGTGGCAGTCCCTGAAAGTAGGTCATT
CTTTGAGTTGTCTCAAAAATTGGATTTCTGACTTTCTTTGAGCTGATGAA
AATGCCAAAGTGAGATTTTCTTTTGGCTTAATTTTTTGTCAGATGTGGAC
CTTATTGTTGTCTATTGAATGCATATTTTCAAAGCCCGGGTTCGTGTTTC
ATTGGTACGTGGCAGTCTCAGAAAGTAGGTCATTCTTTGCACTTGTCTCA
AAAATATGATTTTCGACTGTCTTTCAGCTGATGAAAATACCAATTTCAAA
ATAAGATCTTTTTTTCGACTCAATTTTTTATCAGATGTTGACCTTACTGT
TGTCTATCCAATGAATGGTTCCATCGATTTTTCAAAGACAAAGCAACTAT
TAACAGATAATCCAAAAATGTACTGTCGTACTATGGCAGCAATCCAACAC
TATACATCAAAGTAATTATCAAAATCGTAAGATTCATCACATATGTGATA
CACAAACCATGTGAAAGTAGACTGTAAATGTCTTACAATTGTATGGTCAG
CAAATTGAATGTAAGTAGCTTAGGTTTCTCGAATCAAAGTATTATTAGTA
ACTTGCGATCGTAGTTGCTAGGGGAATTACACTTTTGATCAGAGGGTCAA
TCCCGAGTCATGCCATAGCCAGCCACCGTCACCCATTCATGCAACCTCTG
GCTCTGCGACAAGCCAGGGATGGGTTTGGAGTTTGTGGTCATTAATTGAA
AAACTTACTAATTCTCTTTTCCTGAACACTGCCAGAAGTGGAGGTATTCA
TTTACCTTAGCCAAAAAGGCAGATTTGCGTCGGCGGTCTGTAATGGTTGA
TTAACATTTATTTCACAGCATTGCAAAGACAGCTGAAAAAAACCTTTCAG
GTATACGCAAACTAGAAATGGCAGAAACGATCGCACAACAATATAACAAG
ACCTTAGTCTTTGACGCCATTCGTTTGATGGACAGCACCATGGTAAATTA
ATATCTGATAAAAAGAAAACAAATCGCATACATGTGGGTATCTTAATGAC
CTCAAAGACAGCCGAAAATCCCAATTCGGGCAAAAAGGCAAATATTGACC
TACTTTCAGATACAGCCACACGGTAATTAAACAAGAACCCAGGCGTTAAA
GCCTTTTATATGATAGACAACAATAAGGTCAACATCTGATAAACATTTGA
GTCAGAAAAAAAACCTTACTTAATGTATTTTCAACAGCTGGAAGACAACC
AAATATCCCAATTCTGAAACACTTTCAGTGACTGCCACGTACCAATGAAA
CAAGAACCCAGGCTTTGAAAATATTCAATTGATAGACAACAATAAGGTCC
ACATCTGACAAAAAATTGAGCCAAAAGAAAATCTCACTTTGGTATTTTCA
TCAGCTCAAAGAAAGTCAGCAATCCAATTTTTGAGACAAGTGCAAAGAAT
GACCTACTTTCAGGGACTGCTACATACCAATGAAACAAGAACCCAGGCCT
TGAAAATATTCAATTGATAGAGAACAATAAGGTCCACATCTGACAAAAAA
TTGAGCCAAAAGAAAATCTAATTTTGGCATTTTCGTCAGCTCAAAGAAAG
TCAGAAATTCCATTTTTGAGACAAGTGCAAAGGATGACCTACTTTCAGGG
ACTGTCACACGTCGATGAAACAAGAACCCAGGCTTTGAAACCTTTCATTT
GATAGACAACAATAAGGTTAACATGTGATAAAGAATTGAGCCGGAATAAA
ATCTCGCTTTGGTATTTTCATCAGCTGAAAGACAGCCAGAAATCCACATT
TGAGGACAGGTGTAAAAATGACCTACTTTCAGGGACAAGTTCACGGCAAG
GAAAAAACATCGAAACCTTTGCTAGCATGCATTTTATAGACAACAATAAG
GTCTACCTTTGACAGGAAAATGAACTACAGAAACATCTTAGTTTGTCAGA
TATTGTATTTTAAAGTTTGCAAAAATCCCATTTTTAATGAAATTAAGTCT
AAAAAGATCCTATTCAGTTTTGCGCTACATTAAAGCATTTGGCAGTGAGC
GTGCTCTAAACTTTGCCAATTTCCATGTTGTCGCCATACACAAATCTGTC
AAAATGGCCCCAAAACTTGATTGGGCTGTTGCCATGGCAACGATGGGTGT
TGAGCGGAAAGAAAGCTGTTTTCAGGGGTTGTGGGCCAAGTACTATCTCT
GTGCAAAATATGAGCCAAATCAATTTTTTGACCGTGAGCACTATTGTTTG
ATCCTTACAGACATTGGCTCTTAAGAACCAATATACATTGTATACATTTT
ACCAAATCTAGTTGTATGATTTCTTCTCCATTAGATGGGTACTACCATAA
CCTGTCAGCGGGATGGCAACTGGGACGGGGTTTTCAAGATGTGTAAGAAC
CTGAAAGGAGACTGTCCCAAGATACAGAACAGGGATGATGTTGCCTTCCA
GTGCAGAGGCTCTAGCATTGGTGAGCGCCTATATCTTAAGATTGATGCAA
CAGTAGTCCTCCCTTGTGATAACAACAACATGCTAGTTCTAGCTGTTTGT
CATCATGATTCAAATCTGGCGAATATTAATTTATTAGGAGCAACATGCAA
GGCAGTCTGCACGCTAGGAGGGAATATTCCAATCTTCACAAGAGCAAACG
ACAAAGTGTTCCTGACTCTACGTAGTGAAGATCGACGAGCGTCCCCTCAC
AGCTGGTCGTACAAGTCTTTGGTCGACAAGTTCGAGAAGATGGCCAAATC
CAAGATGACGATGAACACCGTGAAAGACGTTCTGTTGACGTGTACTGGAG
GGCTTGTCTGGTACCCTGACCCACTGGATGTGGGATGTGTGAAAGAATGC
AGTGAGGTATATATAATATTAACACCAGCACGTTATCTTATTTTGAACAT
ATCCTTACATTGAAATGTTGTTCTTAAAGGAAAGCTACACAAAATGTTGA
AAATCCTGCTATGCTATGCTTAATATATCCCAAAGTCAAGTTCTTACTTC
AGGTTGTTTCACATAAGTCCGTCATAGTTTTGGGATCTTGCACCGTTTGC
AACTTATGCCATGCTGACGCCTTCTCACCTGATGATTTTGGTAAACGAAA
CACTGACGTCATATAATTCAATCATCAGGTGAGAAGGCGCGATAATCTCA
CCTGATAATTGAATTATATGACGTCAGTGTACTGATTTTTCACCTGATGA
TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTCCGTGCGTCAGTCTGTGTGTCTTGGTCACACA
CAGACTGACGCACGGACACATACACACACANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGACTTTCAAGCGTACATTTCTCTA
GGAAAGCGGACGGTCCTCCAGTTGTAAGCGTACATTCCTCTGGAATTGCG
ACATTTCTCTGGGAAAGGGGACATTTCGCGGACACCCCCACCGGCCTGTG
GAATCGGCAGAAAACCTGACAAATCGTTTCCTACTTCAGCTATATCACAA
CATCCGGATTTCTGAGCCGTGCAGTGAGATGGCTAATACTATCAGCTCGG
AAGGTAAGCATAGTTTTGATTGAAAACTGAGGCAGGTTTGAAATGAAAGC
GACCGCGCGGTGGACGATCAGTTCTGTGCAAGGTTTTAATGGCGGCCTGT
TGCACGCCCGACAAACAAAACAACGAGTTTTAGCCTGAATATCCGAGTGA
TTGTCAAGATATAAGGCTCCACTGCTTAGCACACGTTTATGAGAGAAGTT
TATACCAAGATGTTAGTCATAGTTATCGAATATTTCTTGTCAAAAAACCG
CGATATACACATAATGTCCAATAACATCGCCACACATGACGTCACACATA
CATGTACGTACGCGGCAGGACAGTTGAGCCTTGTTTCGACAAGCATACGG
GCGGAAGCCTTGTCTCGACAAGCACGCGGGCATGTAGCCGCGTTGTACAA
GAAATACCCTATAAAGACAACTAGAATTGTGACAAATCTTCTCATAGATA
CATGTACTAGGCAGTGGAGCCTTATATCTTTGTAAAAACCCAAAGGGGCG
AGTACGCCGCTCCCGGTATTAGAACCCCTGCCAATCCCGATCCGCACGGC
TTGGGAAATCAACGCGCTAACCACTAGGCTAAAAGGTCCGGACGAGTTAG
ACTGGTCAGTTAGTGGAGGTTGATCCCCACTGTTACACAATCTGTACATC
TTGACAATCACTCGGATATTCAGGCTAAAACTCGTTGTTTTGTTTGTCGG
GTGTGCCATTGAAACCGTGCACAGAACTGATCATCCACCGCGCGGTCGCT
TTCATTTCCAACGTGCCTCAGTTTTCAATCAAAAACTATGCTTACCTTTC
GAGCTGATAGTATTAGCCATCTCACTGCACGGCTCAGAAGTCCGGATGTT
GTGATTCAGCTGAACTAGGAAAGGATTTGTCGGGTTAACCGCCGATTCCA
CAGGCCGGTGGGGGTGTCCGCGAAATGTCCCCTTTCCCAGAGAAATGTCG
CAATTCCAGAGAAATGTACGCTTACAACTGGAGGACCGTCCGCTTTCCTA
GAGAAATGTACGCTTGAAAGTCGAGGAATGTCCGCTTTTCTGGAGGAATG
TACCAATTCTGGAGGAAGGTCCAGATTCGATTGGCTTTATCTATAAAAAA
TCCTAATCGTATTTTGCAACGTGTTAACTGTAGACTTTTACACAGTGGTT
TAAAGCGCATAAGACACCAAAATACAACATTTTCTTATAATTATCTGTTC
TGGGAATAGTATTATTCTATGAATATAAACGTTTAAAACAAATACACACC
CTTCTGATGTTATCTAACATTGAACTATTAGAAACCATACTTTCAGCTCT
TGATTCGTTTCTGATATTCTCATCAGGTGATTGATCAGTGACTTGCCCCC
TCATGACGTCACAATGAACACTGCAGCCGGTTCGGAACCTAACACCATGG
CTAACACCAAATCCATTATTTGATGAGCAAACAGTACTTAATTATCGTGA
TTACATTAAATTAAAAGACATAAAAATATTTACAGTATTTTGTTTGCTTC
TCAAAAGAACTTTCTTTCAGAGTGCAGTGCAAAGTTCCAAACGGCCGGCT
GCCATGTTCATTGTAACGTGATGGGGGGGGGGGGAAGTCACTGATTAATC
TAATTACTAGTACCTGGTGGGAAGAATCAAAAGCTAGAGGAATGATGTTT
TCATGATTCGATGTTCAATTACATCCAAAGTGTGTATATTTTATGCAAAT
GTCTGGTATCAAACAATATTATTATGATTTATGTACTTTCAGGAAATTCT
TAATTTTGATGTCATTGGTGCCGTATGCACTTTAACAAATTAACTGAAGC
TGCGAAAGCGTCAAAGTATGAAGATAATTGTTGAATGAATATTGACCCCA
TACACCGTGTGGTTCATTGTCTGGTAATTTTTAGCTTAAAAAGCCGTTTG
CTTTAGCCCACTGGTATGAGACTTTTTGTTGTTCTTACCTAAACATGAAA
ACTTCATGATGGTGCCAGTGGTTACAAATTAAACATTTGACTTTGCCTAG
TACGCATTTATCAGAAGAATGGCGTTTTCAAAGCTGTGAATCGGTAACCT
TGCCATACAATACTCACATACGCATGTTCAAACATCCTATGTACATTCAG
ACATACATACATATATACACATACACATATATATTACATTTTACAATGAA
CTGTCCCAAATATGTCTTTCTCCAGGTGCAGCCATTCCCTGCAAATTGCA
GAGAAGAATGTGAATGTAAGGATCCAAACGCCATCGAGAACAGAAACGGA
AAAGGAAAGGATAAGTCCAAGGGTGTGTTAGATCCCATTTGGGACAGAGA
AACCAACTATAGCCAAGAGGTCTCAGCTGAAAAACTGATTGAGTATTCCT
ATAATGACAAAGCTGAAGACGGCTTCGACTATATCTAAATGCATGATGTC
AAATGTATATACTGGATACTTGTGTGATAACCCACAGAGTATGACAAACC
AAGCACATGTACATTTGCAGCTTCAGCGTAGCTGTGACTAAGTGGGGTTC
AGTGAGTATCCAGCCCACAATGCCTTGCTAATCAGGATACATATCTTCAG
TGGAAGGATGCATCTGGGAAACTTAGTGAGTAGTGCTAGATGTACATATA
ATATATGATAATCCATATCAAACAGGACATCACAACATAAATGCATGACA
TATTCTTCCGATGACTGCCATGGTATTTGAATGGTTGGTGAACAGCGTTG
GCATTTGGTCATTTGGATGACAGGAATTGCGGAATTGATGCTTATGAAAT
CACCCTGTTTTATGATTATGTTTGTCTGGTTCTTCTGACGGTAAATTGCT
ATCATACTTGTGCGATGTTTTCAAAAAGAGTGTCAATTTCTGGTCGGAAA
AGTTTTCATATTTATCTTGAATGCCTCCTTCGGGAGAGAAAGCCACGAAG
CATGCCAAGGAAAAATCAGTTGTCTGACAACAAGGACGTGAATGTTACCA
CAGAACCACTTCCCAGCAAGGAAGTAGTATGGCGTTGCTTGGAGGATGAG
GATTGTGTATTTTCCTATGACCTCATAACAAACACTTTTATTGGCTATAA
TCACTGACGATGGATTGCAGGGACGAAGGTCACAATTACTTTTGACGTAC
AGTAACATTGATTCGTTTGAAGCATATATTTGTACCTTCAGTCATGTACC
AAGCTGTATTATTGCTATAGTGTCACCCACATTGGTCAAACCATGTAGTC
ACACTAGTGGATCATGGAACGTAACGTCACCAGTTGTCGTGCTCTACCTA
TTATCGCCCACTTTGGGACACATCTACACATGTCAAGGTGTATTTTACCA
AAGGCAGTTCTTATGAGCAATAAAGAAAGACATAAGTATGATCC Coding sequence (CDS) from alignment at Sc0000368:3817..13410+ >Blg00048.2 ID=Blg00048.2|Name=Blg00048.2|organism=Branchiostoma lanceolatum|type=CDS|length=801bp|location=Sequence derived from alignment at Sc0000368:3817..13410+ (Branchiostoma lanceolatum)
ATGCCTCCCTATGACAGACGAGTGTTTCGTCGAAGCTGCTCTGAGGAGGG
CCTCTGGGAGGGACCGACGTGTGACCGTGTCAAGTGCAAGTCGCCCCCAC
CCATGTTCAAGGGTCTGTACAACTGCACCAGGGGGCTGGACTACCAGAGC
AGGTGTACTTTGAAATGTGGAGAACATGATAAGATGGGTACTACCATAAC
CTGTCAGCGGGATGGCAACTGGGACGGGGTTTTCAAGATGTGTAAGAACC
TGAAAGGAGACTGTCCCAAGATACAGAACAGGGATGATGTTGCCTTCCAG
TGCAGAGGCTCTAGCATTGGAGCAACATGCAAGGCAGTCTGCACGCTAGG
AGGGAATATTCCAATCTTCACAAGAGCAAACGACAAAGTGTTCCTGACTC
TACGTAGTGAAGATCGACGAGCGTCCCCTCACAGCTGGTCGTACAAGTCT
TTGGTCGACAAGTTCGAGAAGATGGCCAAATCCAAGATGACGATGAACAC
CGTGAAAGACGTTCTGTTGACGTGTACTGGAGGGCTTGTCTGGTACCCTG
ACCCACTGGATGTGGGATGTGTGAAAGAATGCAGTGAGGTGCAGCCATTC
CCTGCAAATTGCAGAGAAGAATGTGAATGTAAGGATCCAAACGCCATCGA
GAACAGAAACGGAAAAGGAAAGGATAAGTCCAAGGGTGTGTTAGATCCCA
TTTGGGACAGAGAAACCAACTATAGCCAAGAGGTCTCAGCTGAAAAACTG
ATTGAGTATTCCTATAATGACAAAGCTGAAGACGGCTTCGACTATATCTA
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00048.2-exon-Sc0000368-1570713199:3817..4588 | Blg00048.2-exon-Sc0000368-1570713199:3817..4588 | Branchiostoma lanceolatum | exon |
| Blg00048.2-exon-Sc0000368-1570713199:8101..8236 | Blg00048.2-exon-Sc0000368-1570713199:8101..8236 | Branchiostoma lanceolatum | exon |
| Blg00048.2-exon-Sc0000368-1570713199:8354..8622 | Blg00048.2-exon-Sc0000368-1570713199:8354..8622 | Branchiostoma lanceolatum | exon |
| Blg00048.2-exon-Sc0000368-1570713199:12242..13410 | Blg00048.2-exon-Sc0000368-1570713199:12242..13410 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000368 | genome | Sc0000368:3817..13410 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00048 |
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