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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000368:1527..8685+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00048.1 ID=Blg00048.1|Name=Blg00048.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7159bp|location=Sequence derived from alignment at Sc0000368:1527..8685+ (Branchiostoma lanceolatum)
AAGGCCGCCGTCTCCTATTCAACGTGACAAAAATTCTAAACCATGTACAA
CTTATTGCCATAGTAGACAGAAAAGGTAACACTTTATCGAGAGCAAGTCA
TGCATTTCAGTGACTTCGGAGCGGCACGAAAACGAAAAGCGAAAGTTAGA
ACAATTAAGCACCGTGCAGGATGTTACTATCTCTTTGATTAACAATATAT
ATTGAAAGTATGAATAAGACTGAACATGTGAATGAACTGTTACAAATACT
TACACAGCATTGCCATTGGGTTGTTTATACTTCTGACATGGTAAGCTAGA
AGTAGCAGTGCAATAATACAATAGAAGATGGTATGTAACTTGTTGTGTTA
TATTTGCCTAAATTCCTCCATCCAGGTGGTGATAACACTATACGGTGTGA
AGAAGATGGGCTATGGTCACTGCCTCAGGCGTTTTGCCAGCTGATCTGTG
GTCCACCTCCCCAACAAGATAATGCTAATCTGGCCACTCGGCGGTGCCTG
GACACCAGCAACCACCACGTCGGAACCTCCTGCAAGTTCCGCTGCAAGCG
AGGCTATCACGTGGTCGGTGCGTCCTCCCACAGGTACCGAGCCCAATAAC
TTTTTTTTATATCAACCCATAGCGGGTGTGCCTAAACACCTCACCCGGAC
TAATCCGGGTCATTTGTGGCTGAAAAACACTCTGTGTACAGTTTTTATGA
GTTGATTACGATAAAAGAACTTCCCCATGCAGACCCCAACAAATGAATTA
TGATAATCCAATATGGCGGGCAGAAATCCCTTCCATCTTGGAAACGAGTG
GAATAACATGAAAAAATGTCAAATACTTAAAACTTGTGACGTGTATTCAT
AATTGCATAGACAGAGTGTCATGGTCGGTTCTTGCCTCATGCACACTGCA
TATTAGACCCTAGTTTGAGTGAGGTCGGATGAGGTCGATTTATGTATACC
CTTTATATTTCAAGTTGTCATCACAAACAAATCAATTAGCATATATGCTG
TCTCTGCAATCTTTTCACAAATGTTGACAATATCTCGCGTGGGGTTATGC
ATCAATCTACATTGTCATCAGACATTTTGGAATTTGGTACTTATGAACAA
GACAGTAATGCTGCCAACTGAAAGCTGTAGTATAAAAGTAAATAAAATTG
ATAAGTCCACTGAAACCACCGACTTCAAATTTGCCGATTTTCACAATGTC
ACTACCTTGTACTGATTTGACTATCAGCATGTCACTTCTTATATTGCCTT
TGGTAGCCGCGCCCATGTAGCTTCTGATACAAAGACATACGTTTTGTGAC
ACCTTGCGAAATGTATCAAAATGTAACCAAAACGCAGGATAGTGTACGTC
GGTAACGTTAGTTACATCCAGGCTGGAATTNCCAAAACGCAGGATAGTGT
ACGTCGGTAACGTTAGTTACAACCAGGCTGGAATTTCACCAGGTGAGCGT
GATTTACGTGTGGTCGCAGTTTTTTTTTTTTTTTCGGAGCAAACCCGTTG
CTCCTTAAATTAATTAGCCAAGGTACTTTAGTATCAATTCAATGGTAAAG
AAATGGACTTTCACGCGTTAGGATTAGCTAATTGGATCTAGGTGAACTGT
AAACAAGCCGAGCACAAATAAAGTGACCAAAAATCGCTAGTTTTTCGAAA
GCCATCCCGGCCGCTGTCATTTTGCAAAACATGAAATATCTACTAGTACA
TACCTGCACTGGGCAAATCCTGTAGATATGAAAAAAGTCTAAACATTGTA
TAGGTCTGAGGTTTTTTGTTGCGCTATAGGTAGGTGTTTAAACCCATGCA
AATGGGTCCAACCCCGGTTCAACCGTGAACACCGGCGAACGCCGTCTTAG
AGAACGCTGCACAGAACAGAGGCGCATAGCCGTCTGCGGTTCGACTGCAT
TATTGCATGGGGAGGGAATGAAATATGCTGTATTTGCTCTGGAGCAAATT
TCGGTCTTTCTAGTTATACTTGAAATTGAAGTTTTGTAATAATAGATGTA
NTGAACTTGAAGTTTTGTAATAATAGATGTATTGCATTCCTCGTTTGTCA
CAATGTAGAATTACAAATAATTACCTTCGCTAAGAAGTTTATGTTTTGCC
GAGCGTGCGCGTGTGTGTTGTGTGTGTGTGTGTTGTGTGTGTGTGTGTGT
GTGTGTTGTGTGTGTGTGTGTGTGTGTGTTGTGTGTGTGTGTGTGTGNTT
CTAGAATAGCCTTCGTTGTTAAGATTACACTGTCATACTTAAGACAGCTT
CTGCTATTTGGGTGGAGAAGATGATCTACTGATATATTATATAAGTCATG
CAGATGATAACCTTATTTCCATGATAAACGAGAAGCATTCATAATACATC
ATTCGAAAAGGTTGAAATCATTTGGCGAAGGTAAGAGGTCGTGGAACTCT
GTTGTGATTATCATGATTAGCACTTTTTACTCTCTACTGCACTGCGCTTA
CATTTACATTTTCAAATCTGTAAATGTCTACATCACAAGACTTCCCACAT
ATGGACAGCTTGGCTATGACGCTAACATGTACCTTTCCTGTAGAAAATAA
TCATCCTGATGATTATCAGATACGACTTTGCTGTGCAATTGATCAGCTAC
CAGCTTTTTATTGTGATTCATTTCTCTATGCTGTTTGCATTTTTCTTTTA
TTCTTTATGACAAAGACAAAATAGTTGTCTTGTCTCCATGAACGTAAACA
AAAATGGCAGGGCATCGATTAAAACGGGCGTCTTGCCTTTAACTCAAAAC
GCTTGTAAATCTCTTGGTCGTCATGAAGACTGCAACAAGTTCATTTTGGG
TGGTCATCCTTTATCTGTCGCCTTGCATGGCTAACTTGCAGTAACTTGCT
CTTCACCTTGGCACATCCTGGCCAACAGTATGCCTCCCTATGACAGACGA
GTGTTTCGTCGAAGCTGCTCTGAGGAGGGCCTCTGGGAGGGACCGACGTG
TGACCGTGTCAAGTGCAAGTCGCCCCCACCCATGTTCAAGGGTCTGTACA
ACTGCACCAGGGGGCTGGACTACCAGAGCAGGTGTACTTTGAAATGTGGA
GAACATGATAAGGTACACATGTCAGACTCTTTTGTTTGTTCTCAAAAGAC
ATTCCATTTCCTTGGTACATTGGTAATGGGTAACTTGGGGTCTGGATGCA
TCACAAATGCTGCAAAATAACAGAGATTGAAAGATACATTCACGTAATGG
CAGCAGTCTCAATGATTAAGATTGGGGGATTATGGAAAAACGCATGTTGG
AGAACCCACAAATTGCAGTGCAAGACAAAACTATTGAGATTTCATGTTGT
AGCTAGTGTATAACCTGATGGCATTTTCATCCGTTTGCCATGTGTTTTTT
TATTAACTGCAAAGTAGCTGCCAATATAAAATGATTAATTAGAAATCGTT
AGGAGCTTAAGAGCCAATGTCTGTAAGGATCAAACAATAGTGCTCACGGT
CAAAAAGTCGATTTGGCTCATATTTTGCACAGAGATAGTACTTGGCCCCC
AACCCCTGAAAATAGCTTTCTTTCCGCTCAACACCCATCGTTGCCATGGC
AACGGCCCAATCAAGTTTTGGGGCCATTTTGACAGATTTGTGTATGGCGA
CAACATGGAAATTGGCAAAGTTTAGAGCACGCTCACTGCCAAATGCTTTA
TTGTAGCGCAAAACTGAATAGGATCTTTTTAGACCAATGCTTAAACTTTT
AGAAAAATGCTGTGAAGTTGATGTAAAGATACATTTAAGCACTTGGGCAT
CCTCAAAACAATATGATGTTTTAAGGCTACAAAAAATTGTCATTTTTGCC
GAACTTTGAGACGCTGAAATTTGAAAGACAAATAGATACATCAAATAGCT
ACTGAATGAATGCTTGCAAAGCTTGGGTTCTTGTTTCAATAGTCTGTGGT
TGCTACTAGAAGTAGGTCACTTTTCGTGATTTCATTAAAAATGGGATTTT
TGCAAACTTTAAAATACAATATCTGACAAACTAAGATGTTTCTGTAGTTC
ATTTTCCTGTCAAAGGTAGACCTTATTGTTGTCTATAGAATGCATGCTAG
CAAAGGTTTCGATAGTTTTCCTTGCCGTGAACTTGTCCCTGAAAGTAGGT
CATTTTTTAGACATGTCATCAAATGTGGATTTCTGGCTGTCTTTCAGCTG
ATGAAAATGCCAAAATTAGATTTTATTCCGGCTCAATTTTTTTGTCAGAT
GTTAACCTTATTGTTGTCTATCAAATGAAAGGTTTCAAAGCCTGGGTTCT
TGTTTCATAGATGTGTGGCAGTCCCTGAAAGTAGGTCATTCTTTGAGTTG
TCTCAAAAATTGGATTTCTGACTTTCTTTGAGCTGATGAAAATGCCAAAG
TGAGATTTTCTTTTGGCTTAATTTTTTGTCAGATGTGGACCTTATTGTTG
TCTATTGAATGCATATTTTCAAAGCCCGGGTTCGTGTTTCATTGGTACGT
GGCAGTCTCAGAAAGTAGGTCATTCTTTGCACTTGTCTCAAAAATATGAT
TTTCGACTGTCTTTCAGCTGATGAAAATACCAATTTCAAAATAAGATCTT
TTTTTCGACTCAATTTTTTATCAGATGTTGACCTTACTGTTGTCTATCCA
ATGAATGGTTCCATCGATTTTTCAAAGACAAAGCAACTATTAACAGATAA
TCCAAAAATGTACTGTCGTACTATGGCAGCAATCCAACACTATACATCAA
AGTAATTATCAAAATCGTAAGATTCATCACATATGTGATACACAAACCAT
GTGAAAGTAGACTGTAAATGTCTTACAATTGTATGGTCAGCAAATTGAAT
GTAAGTAGCTTAGGTTTCTCGAATCAAAGTATTATTAGTAACTTGCGATC
GTAGTTGCTAGGGGAATTACACTTTTGATCAGAGGGTCAATCCCGAGTCA
TGCCATAGCCAGCCACCGTCACCCATTCATGCAACCTCTGGCTCTGCGAC
AAGCCAGGGATGGGTTTGGAGTTTGTGGTCATTAATTGAAAAACTTACTA
ATTCTCTTTTCCTGAACACTGCCAGAAGTGGAGGTATTCATTTACCTTAG
CCAAAAAGGCAGATTTGCGTCGGCGGTCTGTAATGGTTGATTAACATTTA
TTTCACAGCATTGCAAAGACAGCTGAAAAAAACCTTTCAGGTATACGCAA
ACTAGAAATGGCAGAAACGATCGCACAACAATATAACAAGACCTTAGTCT
TTGACGCCATTCGTTTGATGGACAGCACCATGGTAAATTAATATCTGATA
AAAAGAAAACAAATCGCATACATGTGGGTATCTTAATGACCTCAAAGACA
GCCGAAAATCCCAATTCGGGCAAAAAGGCAAATATTGACCTACTTTCAGA
TACAGCCACACGGTAATTAAACAAGAACCCAGGCGTTAAAGCCTTTTATA
TGATAGACAACAATAAGGTCAACATCTGATAAACATTTGAGTCAGAAAAA
AAACCTTACTTAATGTATTTTCAACAGCTGGAAGACAACCAAATATCCCA
ATTCTGAAACACTTTCAGTGACTGCCACGTACCAATGAAACAAGAACCCA
GGCTTTGAAAATATTCAATTGATAGACAACAATAAGGTCCACATCTGACA
AAAAATTGAGCCAAAAGAAAATCTCACTTTGGTATTTTCATCAGCTCAAA
GAAAGTCAGCAATCCAATTTTTGAGACAAGTGCAAAGAATGACCTACTTT
CAGGGACTGCTACATACCAATGAAACAAGAACCCAGGCCTTGAAAATATT
CAATTGATAGAGAACAATAAGGTCCACATCTGACAAAAAATTGAGCCAAA
AGAAAATCTAATTTTGGCATTTTCGTCAGCTCAAAGAAAGTCAGAAATTC
CATTTTTGAGACAAGTGCAAAGGATGACCTACTTTCAGGGACTGTCACAC
GTCGATGAAACAAGAACCCAGGCTTTGAAACCTTTCATTTGATAGACAAC
AATAAGGTTAACATGTGATAAAGAATTGAGCCGGAATAAAATCTCGCTTT
GGTATTTTCATCAGCTGAAAGACAGCCAGAAATCCACATTTGAGGACAGG
TGTAAAAATGACCTACTTTCAGGGACAAGTTCACGGCAAGGAAAAAACAT
CGAAACCTTTGCTAGCATGCATTTTATAGACAACAATAAGGTCTACCTTT
GACAGGAAAATGAACTACAGAAACATCTTAGTTTGTCAGATATTGTATTT
TAAAGTTTGCAAAAATCCCATTTTTAATGAAATTAAGTCTAAAAAGATCC
TATTCAGTTTTGCGCTACATTAAAGCATTTGGCAGTGAGCGTGCTCTAAA
CTTTGCCAATTTCCATGTTGTCGCCATACACAAATCTGTCAAAATGGCCC
CAAAACTTGATTGGGCTGTTGCCATGGCAACGATGGGTGTTGAGCGGAAA
GAAAGCTGTTTTCAGGGGTTGTGGGCCAAGTACTATCTCTGTGCAAAATA
TGAGCCAAATCAATTTTTTGACCGTGAGCACTATTGTTTGATCCTTACAG
ACATTGGCTCTTAAGAACCAATATACATTGTATACATTTTACCAAATCTA
GTTGTATGATTTCTTCTCCATTAGATGGGTACTACCATAACCTGTCAGCG
GGATGGCAACTGGGACGGGGTTTTCAAGATGTGTAAGAACCTGAAAGGAG
ACTGTCCCAAGATACAGAACAGGGATGATGTTGCCTTCCAGTGCAGAGGC
TCTAGCATTGGTGAGCGCCTATATCTTAAGATTGATGCAACAGTAGTCCT
CCCTTGTGATAACAACAACATGCTAGTTCTAGCTGTTTGTCATCATGATT
CAAATCTGGCGAATATTAATTTATTAGGAGCAACATGCAAGGCAGTCTGC
ACGCTAGGAGGGAATATTCCAATCTTCACAAGAGCAAACGACAAAGTGTT
CCTGACTCTACGTAGTGAAGATCGACGAGCGTCCCCTCACAGCTGGTCGT
ACAAGTCTTTGGTCGACAAGTTCGAGAAGATGGCCAAATCCAAGATGACG
ATGAACACCGTGAAAGACGTTCTGTTGACGTGTACTGGAGGGCTTGTCTG
GTACCCTGACCCACTGGATGTGGGATGTGTGAAAGAATGCAGTGAGGTAT
ATATAATATTAACACCAGCACGTTATCTTATTTTGAACATATCCTTACAT
TGAAATGTT Coding sequence (CDS) from alignment at Sc0000368:1527..8685+ >Blg00048.1 ID=Blg00048.1|Name=Blg00048.1|organism=Branchiostoma lanceolatum|type=CDS|length=645bp|location=Sequence derived from alignment at Sc0000368:1527..8685+ (Branchiostoma lanceolatum)
ATGCCTCCCTATGACAGACGAGTGTTTCGTCGAAGCTGCTCTGAGGAGGG
CCTCTGGGAGGGACCGACGTGTGACCGTGTCAAGTGCAAGTCGCCCCCAC
CCATGTTCAAGGGTCTGTACAACTGCACCAGGGGGCTGGACTACCAGAGC
AGGTGTACTTTGAAATGTGGAGAACATGATAAGATGGGTACTACCATAAC
CTGTCAGCGGGATGGCAACTGGGACGGGGTTTTCAAGATGTGTAAGAACC
TGAAAGGAGACTGTCCCAAGATACAGAACAGGGATGATGTTGCCTTCCAG
TGCAGAGGCTCTAGCATTGGAGCAACATGCAAGGCAGTCTGCACGCTAGG
AGGGAATATTCCAATCTTCACAAGAGCAAACGACAAAGTGTTCCTGACTC
TACGTAGTGAAGATCGACGAGCGTCCCCTCACAGCTGGTCGTACAAGTCT
TTGGTCGACAAGTTCGAGAAGATGGCCAAATCCAAGATGACGATGAACAC
CGTGAAAGACGTTCTGTTGACGTGTACTGGAGGGCTTGTCTGGTACCCTG
ACCCACTGGATGTGGGATGTGTGAAAGAATGCAGTGAGGTATATATAATA
TTAACACCAGCACGTTATCTTATTTTGAACATATCCTTACATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00048.1-exon-Sc0000368-1570713199:1527..2109 | Blg00048.1-exon-Sc0000368-1570713199:1527..2109 | Branchiostoma lanceolatum | exon |
| Blg00048.1-exon-Sc0000368-1570713199:4405..4588 | Blg00048.1-exon-Sc0000368-1570713199:4405..4588 | Branchiostoma lanceolatum | exon |
| Blg00048.1-exon-Sc0000368-1570713199:8101..8236 | Blg00048.1-exon-Sc0000368-1570713199:8101..8236 | Branchiostoma lanceolatum | exon |
| Blg00048.1-exon-Sc0000368-1570713199:8354..8685 | Blg00048.1-exon-Sc0000368-1570713199:8354..8685 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000368 | genome | Sc0000368:1527..8685 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00048 |
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