Blg00034.0 (mRNA) - B. lanceolatum

Overview
NameBlg00034.0
Unique NameBlg00034.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000280:198795..202199+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00034.0 ID=Blg00034.0|Name=Blg00034.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3405bp|location=Sequence derived from alignment at Sc0000280:198795..202199+ (Branchiostoma lanceolatum)
ATGGTGATTCCCTTCGCGGACATCAAAATCGGCGCAGCGGAGTGCTATGT GGACACGGTCGGCGTGGATGCGGACTACCGCGGGAAGGGCATCGGGAAGG CTCTGATGGAGAGGGCTGATTCTGAGGCAAGGCAACGAGGTTGCACGGTA GGCAAGAAGCAATAAAGCGCTCTTAGTGCAGGTTACTTTTGCCAAGAAGG CTATGTTTTAGGTGTTTATGGTTTGTTAGTTGGTTTCTGGACCGTCTGAG CATAACTTGAGAAACTGCGGTTAGATCTTAATGATATTTGGTCTTTAATG TCCTCTAATCGCTATTCAATAGGCTCCGAGTGGTGAAATTGCCATGCCCT GGAACTTCGTGACTCGGGCAAATTTGCGTCATTTGGCCATTCCTATGCTA CAGCCCAAACTGCTCAAGGGACCACCTCCACATAAGGACCACCTAGCCAA TGTAATTTTTTTGCATTGACACAAGCATCAAGAATTCTGTCTATAAAGAC CTGGCAAATGACGCAAATTTGCCCGAGTCACGAAGTTCCAGGGAATGGCA ATTTCACCACTCGGAGCCTATTGAATAGCGATTAGTGGACAACGGACCGA AAAGGTTTGTTCCATCTGGACAGGTGATCTGTCCAGATTGAACAAACCTT TTCGGTCCGTTGTCTTCTTGGGCAGGTTTGATTGCATCCTTTTAGAAAGA AAAGCAGTCTGGTAGAGACTAGCCTCATTGAACATAATCCAAAGTTAAAA TGAAGTTCAAACTGAAAAATAATAGCGCATCAAATTTTCGACTGTCCTAG TATAATAGACCCTTTTCCAAATACCGCGGCCATTTTGAATCTAGCGCGAG AGCGCGTGGTTCGAGCTCGGGAAAGCACGGGAAAAGTACACACCCGGTAA GTCCGAGCCAGCGGTAATGGCGTCCTCAATAGAAAGCAGCGTTGAGTCAT CTTCGGCGGCGATATGTTCTCCTCCTCGGTGAAATCCATCGATATATTTG CATGGCACAAGTAGATGATATTGTTGTGGACACTTGGACTCGATATCGGC CAGTAAAATTGTGAATTTCTGCTACTTTTCCACAGTTCCTGCCGGGATGT TGAGCGCACGCTACAGTGATAGAATGCTAATATGTTTACACCGCGTGCTT GTAGTTTCCCTAGTAATGTTAGCTTAAGTCGAGAAAATCCCACAAAACAT ACACTTTTCGGGCTGGGATCCTTAGAGCTACTTAGATAGAAATATACAGA ATTTTACCGGTTGTGACCGTAATTTTGAACGATGCCAACTTCGCCTGGGA AAACGCGCGTTGAGAGGGGGTCGTGTGTTCTGTCTAGCCTTTCTTTCTTT TCTGTCTAGCTTTTCCTTTCTTTCTTGTTACATCTCTCCGCATGGCGATA TTTGATATTTCCGCTGAATGCAATCCAACAAAAAAAGACGTGAAAATGTA GGCTTGAGCTTAAGGTCAGTTTGGTTAGGAATTTAGCAGAATTTCGGCGG CTTCTTTTGACGAGTTTTCTGAAATATCAAAACCTAAAGTACGTGAGTGA AGATGGAGTGTTTTCACTTTGCGCCGTAATATCTTAATTTCCGTCGGATG ATATTACAGAAACGTGAAAATATGGGCTTGAGGGCTTTGCGAGTATAGAA ATTTGACGAAACTTCGGTGGCTCCTTTGACTTTGACAATATTTTAGTGCC AAGATTAGCTTGATGAAGTTCGTGAGTGAAAGCAGGGGGCGTGTTTCATT ACATCACTTTTCGCGGAAATATTTTAGATTTCCACAGGATGAAACCCCAC AAAAAAAGGAAAAATATCGGCATGAGGTCCTTCAGTCCTCAAGTCAATAC TATTTAACGTTTTTCGGGTTCCATCCGGGCAACAGATATCTGAAATATTG CCGCGCAAAATGATTTAAAGAAACGTCAGATACAGTGGAAAACACACCTT CACTCACGTACTTGGAGTCCTCAAGACTAAATTCTTGGCATCCTAAAAGA TGATGTTGGCATTGTCACGACAGCCAAAAGGCTCAAGAGTTATATTCATA CCTAAACGAAGCTATAAGGATCCCAGCCCGAAAAGTGTATGTTTTGTGGG ATTTTCTCGACTTAAGCTAATATTACTAGGGAAACTACAAGCACGCGGTG TAAACATATTAGCATTCTATAACTGTAGCGCGCGCTCAACATCCCGGTAG GAACTGTGGAAAAGTAGCAGAAACTCACAATTTTACTGGCCGATATCGAG TCCAAGTGTCCACAACAATATCATCTACTTGTGGCATGCAAATATATCGA TGGATTTCACCGAGGAGGAGAACATCTCGCCGCCGAAGATGACTCAACGC TGCTTTCTATTGAGGACGCCATTACCGCTGGCTCGGACTTACCGGGTGTG TGCTTTTCCCGCGCTTTCCCGCGCTCGAACCACGCGCTCTCGCGCTAGAT TCAAAATGGCCGCGGTATTTGGAAAGGGGTCTATTGCATCCTTCATCAGA ATCCAAGTGATCAAACGACTGGATCACGTGTCATTGCGATCACGTGACGT CAACAATTGGTCACGAAGGTCAGGAAGTCTATACCGCCCGCCGTCTCTGA TTGAACGTATGTTGTTTTCCCCAGTCGATATTCCTATGGGTGACGCAGAG TAACCGCGCGGTCCGCCTGTACGAACGGCAGGGCTACGTCATCACCCATC CATTTGGTACTTGGTTCACGGGGTTTGCGACGGGCTGCAGAGTGAGTCCA TCATACTGTACGGTCTTCTTACCACACCATGAAATATTGTTGTTGTTTTT CGCATTGTCTGTGTACTTGTTTCTCTCTCTCTCTCTCTCCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTCTCTCTCTCCCCTC TCTCTCTCCCCTCTCCCTCCCCCCCTCTCTCTCTCTCTCCCCCTCTCTCT CCCTCTCTCTCTCTCTCTCTCTGCGTGTTTCCGTCTGTGCGTGTGTGTGT CACTATGTGTGTATTTGTGTTTGAGTGCTACAGTACGCGCGCACGCGTCA CTGTGTGTTTCTGTGTGTGTGTTTGTGTGACTGTGTGTGTTTGTGTGTGA GTTTCTGTTTGTGCGCGCGCGTGTGTCAGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGCTGTGTGCTGTGTCTGTGTTTGTGCTTCCAGATTTTTGT AGTATAACTCGAGTGGTCTGTGTGTATGTGTGTATGTGTTTGTGTTGCTG GTTGCGTTATGTGTCGATGTATGCGTGCGTGTGCGTACGTGAGAGCGTGC ATACACCATGCATGTGTGGGTTATGTTGTATTAGGTACAACTGATATCAA CCTTTTTTGTCTGTCCAAACTACAGGACTGGTACAACATGGAGAAGAAAC TGTAA

Coding sequence (CDS) from alignment at Sc0000280:198795..202199+

>Blg00034.0 ID=Blg00034.0|Name=Blg00034.0|organism=Branchiostoma lanceolatum|type=CDS|length=294bp|location=Sequence derived from alignment at Sc0000280:198795..202199+ (Branchiostoma lanceolatum)
ATGGTGATTCCCTTCGCGGACATCAAAATCGGCGCAGCGGAGTGCTATGT
GGACACGGTCGGCGTGGATGCGGACTACCGCGGGAAGGGCATCGGGAAGG
CTCTGATGGAGAGGGCTGATTCTGAGGCAAGGCAACGAGGTTGCACGTCG
ATATTCCTATGGGTGACGCAGAGTAACCGCGCGGTCCGCCTGTACGAACG
GCAGGGCTACGTCATCACCCATCCATTTGGTACTTGGTTCACGGGGTTTG
CGACGGGCTGCAGAGACTGGTACAACATGGAGAAGAAACTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00034.0Blg00034.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00034.0-exon-Sc0000280-1570713199:198795..198941Blg00034.0-exon-Sc0000280-1570713199:198795..198941Branchiostoma lanceolatumexon
Blg00034.0-exon-Sc0000280-1570713199:201419..201535Blg00034.0-exon-Sc0000280-1570713199:201419..201535Branchiostoma lanceolatumexon
Blg00034.0-exon-Sc0000280-1570713199:202170..202199Blg00034.0-exon-Sc0000280-1570713199:202170..202199Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000280genomeSc0000280:198795..202199 +
Properties
Property NameValue
GeneIDBlg00034