Blg00033.8 (mRNA) - B. lanceolatum

Overview
NameBlg00033.8
Unique NameBlg00033.8
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000280:186591..190761-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00033.8 ID=Blg00033.8|Name=Blg00033.8|organism=Branchiostoma lanceolatum|type=mRNA|length=4171bp|location=Sequence derived from alignment at Sc0000280:186591..190761- (Branchiostoma lanceolatum)
CTAAAAATGAATTTCGAGCCCTGCTCTGTTTGCAGCACCAGGAACTGCAG AGGGTCCGCTGCAGGTTAGGAACTTGGAGGCAGAAGACATTGACTTTGTC GCTCGAATGCTGGTGGAGGCTTTCAGGGATAAGTTTGAATTTGCAGTTGG AAAGAGTCGGTAAGATTTCCTTAGAGTGCGTTCAGTTAAATACCTCGGTT AAAGTGTTTATGACACCAAAATACAACATTTTCTTATTTTCTGTAATAGG AATAGTATCATTCAATGAATATAAACGTTAAAAACAAATACACACCCTTC TGATGTTATGAGAATTGAACCATAAGAAAACATACTTCCAGCTTTTGATT TTTCTTTGATCTCCCCACCAGGTAATTACATTAATCAGTGACTTTACTCT CCCGATGACGTCACAATGAACACGGCATCTGGTTCGGAACCTTGCACCAT GACTTGTGAAAAACATTATTTGAAGAGCGAACAGTGTTTGATTATCGTGA TTACATTCAATTAACAAGACATTATGATATTTAGTTTGTTTGTTTCTCAA AAGAACGTTATTTCCGAGCCACAGAGCAAAGTTCCAAACTGGCTGCCATG TTCATTGTGACGTCATCGATAGAGAAGTCACCGATTAATATAATTACCTG ATGGGAAGAATCAAAAGCTGGAGGTATGATGTTTTGATGGTTCGATCTTC AATAACATCCGAAGGGTGTATATTTTGTGCAAATGTCTATGTTATTATAT GGTTATGTAATTTCAGGATTTTTATTTCTAGTATAATGTCATTGGTGTCT TATACACTTTAATTCTACTTGAGACTGGTGCAATAGTGGGTATAGGTTGA TATGATGGGCAGTCATCTTAAGCTGCTAAAAAAAAAAGAAAGTGGTCAGG TTTTTATGAATGAAATTATGAATGAAACACAATAATCTCAAGAACACACA CCGGTGAGAAATACGTTCAGGATCATAAGTTTGAATTTGCAGTTAAAAAG AGTCAGTAAGACTTTATCTGAGTGTATTGGGACCTCGAGCTCCCAGTGTC TTTGCAATTGTTTTTAATGTCTTTAAACACAGTTAACATTGAGCACTACA GCAAGTACTTAAGTCCACTGGTAGGTGATACTCTGGGCCGTGATGTTTCA GTGTAAGGTTGAAGGACAAATGATCCTTAACCTGCTTATACCCCATACTA CAGGATTGAAGCCACAATACAACAACAGGCCAGCTCACTTAGCCGTTCTC CCAATGTTTGGCACAGATATTATGTGGCATTGTACGAGGGAAAGTTGGCC GGTGCTATGTGCATTGTATTTTATGGAGACAGGTTAGTTTGATTATTAGT ATTACAATTTTTACTTCACCCTTACACACACTAAGGGACTAAAGTACTGT TTTTGTCTTGTCTGTGCATGTGTGTCTGTGTGAGTACATGTGTGTATATG CATGTGTATGAGTGAGTGTGTGTTTGTGTGTGTGTATGTGTGTGTGCAAG TGTGTGTGTCTGTGTGTGTTTGGATGTGGATGTGTGTCTGTGTCGCTCTG TGTGTGTGTTTGTGTGTATGCGTGTATGCGTGTGTGTGTGTTTGGATGTA GATGTGTGTCTGTGTCACTGTGTGTGTGTGTGTATGTTTATGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACAGCATTCAAAAGGG GCTTGAAGGGTTGATTAGTACGGGTGATTTGAATTGCAACAGTATCATAA TACAATAATATCGCAATATCATAATCTCTATCATCATGACATCTTAGATT GCCTCTGTTATTATACTTTACAATTGATTTATTGGCATTGCTGTTTGTTT CTACAGTGCTGATGAGGGTTCCCAGTGCTGTGATTCCCAGCTGGGCTATT ACGGTTCAACCAGGTATGGATGTTTGTAAATGTTGTTGTTGTTGCTAACC TTGTAGTGCCTAGTGGCACATAAGTCAGCAGGTTTCCTTGCTGTCTCAGT TGCAGGGGATATCTTGCTAGCCCTTCCCCTTAAACATTGCTTGAGGCCCC TCCTCAAAAACAGGACCCCCATTTTATGTCCCTTCCAAAAGATGGGTGCA GCTCCAACCGAGATGTCCTGTCACAGAATTGAACCAGGGCCTATTGGTTA CCATTGTAATTGGGCATCCCCTCAAGACACCTCTTCAAACATGGGACCCC CATTTTATGTCTCTTCCGAAAGACGGGGGGTGTCTGCTTCAAATTACTTG GACCAGAAGGCCCGGGTTCAAGCCCCGGGTAGGACACCTCTGGACAAGAG GCACATTGAGTTATACCAAAGACTTTAAAAAATGCCATGGTACATACTTC TGAAACAGTATGGAAGTTAGACACACTCCACTGTCAGTGGACTAGCCCCC TGCTGCAGTGATTGCACCACAGTGTGGCCCAGGGTTATGAAACGGAGATG GGCTCCGCCCTATACATCTTATGGTGTGGGAGGACTTTAACTAACTTTCG AAAGACGGGTGCAGCCCCAACCGAGATGCCCTTCCCAGGATGTTACCTCA TCACTTTGGTCCTTGATTCTGGTGCAAAGTTTTCTTACATCATGAGGGCT AAAAATACATTTTTCTTTTTAGACAACCTGAACCAGCACTAGTACACACT CAGGTACATTCAAAGTTGCCTGAACCAAACAAGTTTTACTCTCACTGGAC TGCACCTGTTTGCAATAAATTATTGGGCCAACTGTCCAAAGTTTTCGCCA ATTTTCCCTTGTGGTCACACTGTTGTGTGGGTAAAATATGTGACTGCTAC AAACAAAATGACTGCCCCTGGGATGTCACATACAAGATTATCCCTTTATT GGAAATCGTAGTGTTTCAACTGAATTAAAAACAATTAATGTACAATGACC GAGATTCATCAAAAAGAGATTTGCAATGACTACACCTACTGGTGCTGTTT GAATAAAATTTGACATTTCAGGCAAAAAATTGGCTCCCATTGGTGCTGAT TGGCGGCAGATTGGAGATAATAAGCGCCCTGTTTGTGTCAGTTGGTGAAT GTCTTTCACAAACAGTTGCAGCGTAGTGTGACCAACAGTGCTTTAGTGCA GGGCAAATAATTTTGTGTGTTTGTTTGATTGATTGTTTGTTTGAACCTTT GTTTATTCATGATAAGCTCAAATCGGCACGCAGGCCGCTTTTCATTGAGG TCATGAGGGAAGAGGTACATGTAAGGGTCAGATACAATATAGCAGAGATA CACAGTCATTTGAGTCCTAATAACCCTTTTTTTAACATATATCATTACAT ACATATGATACAGCAATATACAATTGCTACAACATACAACATATAGTAGG GCGAAAGCCGTTCGTTTTGTTCATTTCCGTTACTTCAAGAGTCTCTTAAA GGAAGTCAGATTCCGAGCCGTACGTGTGTCTGGCGGTAGGCTGTTCCAGA CATTTGGTCCGTGGTGCCTGCTACCGATCTACCATAATGAGGAATGTTTT CACAAACTGTAGGCTCTGGTGTGTACATTGCTGTTTGGACAACTCTGACA TGCGCAGAGGGGAGTGTTACATAGACCGCATCTGTGTGGACGCAGGCTAT CGAGGAAAGGGCATCGGAAAAGCGATGCTGGACAAGGCCGAATCTGAGGC TCGGGAACACGGATCCACGGTAGGCTGGACGGCAAGATGTTTGTTTGTTT GTTTATTTGTATTGTATACCTGATAAACAGGTTTGTAACACACCAGGTTT GTACTGATCAGTATAAGCTGGATATCTTGACAGATTTATTTGATCCTCTC ACACCGGGATGGATCCTTACTCTTTTTGATAAGTGAGGTGGGTTCCTTTA CATGCTGGAGGTCTGACTCTGCTAAGACACAGGACCTCCTTTTAAAGTTA GAGCTTTTGCACAGTAATCAGTCAATGGATATCAGGGTACTTGCTGTTAG CTCACTTGTCTGAATTTGAGCGACCTTGAATTTGCAATGTGTCTTGTCTC GGATAGTTCTTCTATCTCTTGGTAGGGTTCCAATGTCAATGACACCATGT TAGGATGCACTTTCTGTTTATTCACTTTGTCTCTCACAGACGTCCATGTA ACTGTGAGGTCTTAGACCCTCAACTTAGAGGTCTGTCTATTACGCATGCA TGTTTGAGTTTATTATGTCAC

Coding sequence (CDS) from alignment at Sc0000280:186591..190761-

>Blg00033.8 ID=Blg00033.8|Name=Blg00033.8|organism=Branchiostoma lanceolatum|type=CDS|length=450bp|location=Sequence derived from alignment at Sc0000280:186591..190761- (Branchiostoma lanceolatum)
ATGCTGGTGGAGGCTTTCAGGGATAAGTTTGAATTTGCAGTTGGAAAGAG
TCGGATTGAAGCCACAATACAACAACAGGCCAGCTCACTTAGCCGTTCTC
CCAATGTTTGGCACAGATATTATGTGGCATTGTACGAGGGAAAGTTGGCC
GGTGCTATGTGCATTGTATTTTATGGAGACAGTGCTGATGAGGGTTCCCA
GTGCTGTGATTCCCAGCTGGGCTATTACGGTTCAACCAGGCTCTGGTGTG
TACATTGCTGTTTGGACAACTCTGACATGCGCAGAGGGGAGTGTTACATA
GACCGCATCTGTGTGGACGCAGGCTATCGAGGAAAGGGCATCGGAAAAGC
GATGCTGGACAAGGCCGAATCTGAGGCTCGGGAACACGGATCCACGGTAG
GCTGGACGGCAAGATGTTTGTTTGTTTGTTTATTTGTATTGTATACCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00033.8Blg00033.8-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00033.8-exon-Sc0000280-1570713199:190603..190761Blg00033.8-exon-Sc0000280-1570713199:190603..190761Branchiostoma lanceolatumexon
Blg00033.8-exon-Sc0000280-1570713199:189430..189558Blg00033.8-exon-Sc0000280-1570713199:189430..189558Branchiostoma lanceolatumexon
Blg00033.8-exon-Sc0000280-1570713199:188849..188905Blg00033.8-exon-Sc0000280-1570713199:188849..188905Branchiostoma lanceolatumexon
Blg00033.8-exon-Sc0000280-1570713199:186591..187249Blg00033.8-exon-Sc0000280-1570713199:186591..187249Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000280genomeSc0000280:186591..190761 -
Properties
Property NameValue
GeneIDBlg00033