Blg00033.7 (mRNA) - B. lanceolatum

Overview
NameBlg00033.7
Unique NameBlg00033.7
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000280:184688..189607-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00033.7 ID=Blg00033.7|Name=Blg00033.7|organism=Branchiostoma lanceolatum|type=mRNA|length=4920bp|location=Sequence derived from alignment at Sc0000280:184688..189607- (Branchiostoma lanceolatum)
AAGGTTGAAGGACAAATGATCCTTAACCTGCTTATACCCCATACTACAGG ATTGAAGCCACAATACAACAACAGGCCAGCTCACTTAGCCGTTCTCCCAA TGTTTGGCACAGATATTATGTGGCATTGTACGAGGGAAAGTTGGCCGGTG CTATGTGCATTGTATTTTATGGAGACAGGTTAGTTTGATTATTAGTATTA CAATTTTTACTTCACCCTTACACACACTAAGGGACTAAAGTACTGTTTTT GTCTTGTCTGTGCATGTGTGTCTGTGTGAGTACATGTGTGTATATGCATG TGTATGAGTGAGTGTGTGTTTGTGTGTGTGTATGTGTGTGTGCAAGTGTG TGTGTCTGTGTGTGTTTGGATGTGGATGTGTGTCTGTGTCGCTCTGTGTG TGTGTTTGTGTGTATGCGTGTATGCGTGTGTGTGTGTTTGGATGTAGATG TGTGTCTGTGTCACTGTGTGTGTGTGTGTATGTTTATGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACAGCATTCAAAAGGGGCTT GAAGGGTTGATTAGTACGGGTGATTTGAATTGCAACAGTATCATAATACA ATAATATCGCAATATCATAATCTCTATCATCATGACATCTTAGATTGCCT CTGTTATTATACTTTACAATTGATTTATTGGCATTGCTGTTTGTTTCTAC AGTGCTGATGAGGGTTCCCAGTGCTGTGATTCCCAGCTGGGCTATTACGG TTCAACCAGGTATGGATGTTTGTAAATGTTGTTGTTGTTGCTAACCTTGT AGTGCCTAGTGGCACATAAGTCAGCAGGTTTCCTTGCTGTCTCAGTTGCA GGGGATATCTTGCTAGCCCTTCCCCTTAAACATTGCTTGAGGCCCCTCCT CAAAAACAGGACCCCCATTTTATGTCCCTTCCAAAAGATGGGTGCAGCTC CAACCGAGATGTCCTGTCACAGAATTGAACCAGGGCCTATTGGTTACCAT TGTAATTGGGCATCCCCTCAAGACACCTCTTCAAACATGGGACCCCCATT TTATGTCTCTTCCGAAAGACGGGGGGTGTCTGCTTCAAATTACTTGGACC AGAAGGCCCGGGTTCAAGCCCCGGGTAGGACACCTCTGGACAAGAGGCAC ATTGAGTTATACCAAAGACTTTAAAAAATGCCATGGTACATACTTCTGAA ACAGTATGGAAGTTAGACACACTCCACTGTCAGTGGACTAGCCCCCTGCT GCAGTGATTGCACCACAGTGTGGCCCAGGGTTATGAAACGGAGATGGGCT CCGCCCTATACATCTTATGGTGTGGGAGGACTTTAACTAACTTTCGAAAG ACGGGTGCAGCCCCAACCGAGATGCCCTTCCCAGGATGTTACCTCATCAC TTTGGTCCTTGATTCTGGTGCAAAGTTTTCTTACATCATGAGGGCTAAAA ATACATTTTTCTTTTTAGACAACCTGAACCAGCACTAGTACACACTCAGG TACATTCAAAGTTGCCTGAACCAAACAAGTTTTACTCTCACTGGACTGCA CCTGTTTGCAATAAATTATTGGGCCAACTGTCCAAAGTTTTCGCCAATTT TCCCTTGTGGTCACACTGTTGTGTGGGTAAAATATGTGACTGCTACAAAC AAAATGACTGCCCCTGGGATGTCACATACAAGATTATCCCTTTATTGGAA ATCGTAGTGTTTCAACTGAATTAAAAACAATTAATGTACAATGACCGAGA TTCATCAAAAAGAGATTTGCAATGACTACACCTACTGGTGCTGTTTGAAT AAAATTTGACATTTCAGGCAAAAAATTGGCTCCCATTGGTGCTGATTGGC GGCAGATTGGAGATAATAAGCGCCCTGTTTGTGTCAGTTGGTGAATGTCT TTCACAAACAGTTGCAGCGTAGTGTGACCAACAGTGCTTTAGTGCAGGGC AAATAATTTTGTGTGTTTGTTTGATTGATTGTTTGTTTGAACCTTTGTTT ATTCATGATAAGCTCAAATCGGCACGCAGGCCGCTTTTCATTGAGGTCAT GAGGGAAGAGGTACATGTAAGGGTCAGATACAATATAGCAGAGATACACA GTCATTTGAGTCCTAATAACCCTTTTTTTAACATATATCATTACATACAT ATGATACAGCAATATACAATTGCTACAACATACAACATATAGTAGGGCGA AAGCCGTTCGTTTTGTTCATTTCCGTTACTTCAAGAGTCTCTTAAAGGAA GTCAGATTCCGAGCCGTACGTGTGTCTGGCGGTAGGCTGTTCCAGACATT TGGTCCGTGGTGCCTGCTACCGATCTACCATAATGAGGAATGTTTTCACA AACTGTAGGCTCTGGTGTGTACATTGCTGTTTGGACAACTCTGACATGCG CAGAGGGGAGTGTTACATAGACCGCATCTGTGTGGACGCAGGCTATCGAG GAAAGGGCATCGGAAAAGCGATGCTGGACAAGGCCGAATCTGAGGCTCGG GAACACGGATCCACGGTAGGCTGGACGGCAAGATGTTTGTTTGTTTGTTT ATTTGTATTGTATACCTGATAAACAGGTTTGTAACACACCAGGTTTGTAC TGATCAGTATAAGCTGGATATCTTGACAGATTTATTTGATCCTCTCACAC CGGGATGGATCCTTACTCTTTTTGATAAGTGAGGTGGGTTCCTTTACATG CTGGAGGTCTGACTCTGCTAAGACACAGGACCTCCTTTTAAAGTTAGAGC TTTTGCACAGTAATCAGTCAATGGATATCAGGGTACTTGCTGTTAGCTCA CTTGTCTGAATTTGAGCGACCTTGAATTTGCAATGTGTCTTGTCTCGGAT AGTTCTTCTATCTCTTGGTAGGGTTCCAATGTCAATGACACCATGTTAGG ATGCACTTTCTGTTTATTCACTTTGTCTCTCACAGACGTCCATGTAACTG TGAGGTCTTAGACCCTCAACTTAGAGGTCTGTCTATTACGCATGCATGTT TGAGTTTATTATGTCACGTAGGGCTGTGTACCTAAACAAAAATTTAGGTA CAGGTATGGTACAGGTACAGCAGTTTAGGTACAGGGCTGAACCTGTACAT GCACAAGTTTGGTCAATTATCTATAAGTTAACCATGGAGCCAACTGTTTT TTTAGTGGTAAATTGTCATCTTTGTATGAAAATTTATGTATTTCAATCTC AAAAGAAGTCTATTTGCAGGTTTTCTTCATTTTCATCTGTGAGGTTATCA AAATTGTCATATCTGTCAAGCGACCTACCTTTAGTCTAAAGAAGGGTGTC CACTCAAGTGTTTTAGTTTGTTTAGGTACAGGTAGAGCCGTACAGGTACA TCAGATGTTCAGGTCTGGACCTGTACCTGAATAACTTTACAGGTACAGGT ATGGGTTTTAGGTACACAGCTCTAAATTGTCATTTTTAGTTCATATGCTA ATGCTGCTAACTAGCACCACATGTTACACAACTGATTTTCATTCCAACTT TCTACCCAACTATAGCTGATGTCCCTGTGGGTGAAGCAGACGAATCGTGC TGTTCATCTGTACGAGCGACAGGGCTACAGCATCAGCATGAACTGCTGCT GGCCCTGCACATGGTTTGCCGTGGGAACTGCGGTGGGTACAATTACAGTG TCACCTGTCCGCAGCTAGTCCCCAAGCATATGTAAGGATCCAGCTCATTC CTTGTGTTTTATGCCTTTTTCTTGCAACATTTAGTAAAGATTCGTCCTAG TTTAAGTCAAACTTTAACAGAGGCGTAAAACACTGAGGAGCCGGATCCTT ACATCTGCTTGGAGATTCGTCTGTGGCGTCTTTACATTTGGGAGGTCGCT GGTTCAAACCCTGGCTGAGTCATACTGGACACTTTAGAAACATTGCTTTC TTTGCTTAGCACTCAGCACTTATGGGAAAGAGTATGGGAGTTACACACAC ACAACTACTAGTGGACTAGAGCCCCCTGCTGTAGAGCTTGCATAACTATG TGACCCAGGGGCTTATGATAGAAATGCTGTATACACCAAAAGGTGTGGGA TTGATATTGACTTTCACGTTTTAATTTGACACCACACAACTTTTACTATT TGTTCTATCTGTGTTTGTAGTTACTCATTCTTTTTCTCTACTGATTTATT TACAGCGCTGGTATCAGATGGAGAAACAGCTGTAGTGCTGAAGGCAAACC TAGCAGACTTCTCTGGAACTGCAGTTTTTTACTTGTGTCTTATTCAGGGA GTTAAGAAATCTAGAATTCTATGACTATTTTACTATTTTATAAAATGATG AGATATGATGAGGATTCACAACATCTCTAATTATAACTGAAGCAGGTTTA ATCATTTTAACATAGAAGTTATGCAAATAAGGAGGACATTGTTGGCATGA TTAATGAGCAAATGACATTACCCTTTGGTTTAAAACTCCTCATTTGCAGA AGAATACATTCCACAGACCCCTATGTTCAATGTAACAAAATTTGTCACTT TATTTGCTTTACTAGGAAATTATGTAAATAAATAAGTAAGTCGCTTTATT TGCTTTATTCAGGAAAGTACATGTATGTAGATAAGTAGTGTTACAGGGTG TTAGATTTGTTATGGCTACAAACATTCTGTGTCAACTATTGTGTATAATT TTATCTAGCATTACTGTAAAAGCAAGTGCAATTTCCACCTTAAACCTACA ATCCCTGAATGCAGGTGTCATTCAATCCCTTGTCGGAAGGGGTAAGAATG AAATACAGGCACAACAACTGACGACAATGTTTTGACCTCATGTTTTATTA AATGATATGTGTGGGTGTGTCTTTTACATTGAAAAATATCCATCTTTGTA CACAGTTCCCCCCCCCCCTCAATTATGGACCTATTCTGTGAAATTGAAAT AAACGTGAGAAAGTTCAAAT

Coding sequence (CDS) from alignment at Sc0000280:184688..189607-

>Blg00033.7 ID=Blg00033.7|Name=Blg00033.7|organism=Branchiostoma lanceolatum|type=CDS|length=387bp|location=Sequence derived from alignment at Sc0000280:184688..189607- (Branchiostoma lanceolatum)
ATGTGCATTGTATTTTATGGAGACAGTGCTGATGAGGGTTCCCAGTGCTG
TGATTCCCAGCTGGGCTATTACGGTTCAACCAGGCTCTGGTGTGTACATT
GCTGTTTGGACAACTCTGACATGCGCAGAGGGGAGTGTTACATAGACCGC
ATCTGTGTGGACGCAGGCTATCGAGGAAAGGGCATCGGAAAAGCGATGCT
GGACAAGGCCGAATCTGAGGCTCGGGAACACGGATCCACGCTGATGTCCC
TGTGGGTGAAGCAGACGAATCGTGCTGTTCATCTGTACGAGCGACAGGGC
TACAGCATCAGCATGAACTGCTGCTGGCCCTGCACATGGTTTGCCGTGGG
AACTGCGCGCTGGTATCAGATGGAGAAACAGCTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00033.7Blg00033.7-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00033.7-exon-Sc0000280-1570713199:189430..189607Blg00033.7-exon-Sc0000280-1570713199:189430..189607Branchiostoma lanceolatumexon
Blg00033.7-exon-Sc0000280-1570713199:188849..188905Blg00033.7-exon-Sc0000280-1570713199:188849..188905Branchiostoma lanceolatumexon
Blg00033.7-exon-Sc0000280-1570713199:187093..187249Blg00033.7-exon-Sc0000280-1570713199:187093..187249Branchiostoma lanceolatumexon
Blg00033.7-exon-Sc0000280-1570713199:185976..186092Blg00033.7-exon-Sc0000280-1570713199:185976..186092Branchiostoma lanceolatumexon
Blg00033.7-exon-Sc0000280-1570713199:184688..185452Blg00033.7-exon-Sc0000280-1570713199:184688..185452Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000280genomeSc0000280:184688..189607 -
Properties
Property NameValue
GeneIDBlg00033