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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000280:185908..194403- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00033.4 ID=Blg00033.4|Name=Blg00033.4|organism=Branchiostoma lanceolatum|type=mRNA|length=8496bp|location=Sequence derived from alignment at Sc0000280:185908..194403- (Branchiostoma lanceolatum)
CTCTGTCAGACCATGGCAAAATATTCCGGCACAGAAATTCCTTACTTCCG
GGTATGCGAAAATGCGTCATGCGTCGTCCTGTTGACCGAGTGGACGATCA
GGTCAGGTCAATGACCTGTGACCCAGGGGTCAAAAGAGGGCAGGTTTTAC
CATTTGCTTCATGATGAGGCACCGTCGTTTAGATGTTAGGACAACTTTAG
TTTCCTGTTTAACTCTACCCTAGCAGTAACGTTAACTGTGTGCTTTCGGC
CAAGTGAATTCTACAAACTTTAAGGTAAGTTTGGAGCAAGTCAAGAACAT
TTATTGTTCCTTGTATCTATAATTTGTAGCTAATAAACCAACCTCCTTGC
TTAAACGTTAGATCGACTGAAAGATAATAGAATCTGAGAACTAAGCTTTG
TGCATATCGTGCGTGTGGTTTAACAGTAACATCAATAATATTTTTACAGA
AACGTTACCACGTCTATTGTCTACATATCGCCATAGATGAAAGACTCAAG
GCATCAAACCTAGATTGAAGCATATGTGGACATTTTGATTTACAAATTTA
TGTTTGCACTAGATTAGTCATCACTTTTGTTGCAAATTATGCACAGTGAG
GCCATCAAAGATATGGAGTCTGATCCAGGTGCTCAAAGTGAAGCAGCTGT
GCTGCCTGTGCTTACAGAACAACCAGGTATGTATCATCTAAGGTAAAGGT
AAAAGCATGAGTTGAGTTATAAAGTTTTGCAGATGTGTTTGTGTGTGTGT
GTGAGTGAGTGTGTGTGTGAGTGTGTGTGTGTGTGAGTGTGTCTGTGTGT
GTGTGTGAGTATGTGTGTGTGTGTGTGTGTGTATGAAGCTGGGTGTTATC
CAAACACTCAAGTGTCTAGGAGACGGTTTTCGAAGTCAGCTGCAGATCCC
ATGTCCGGCTCTTCTAATCCTTCCTCAACCGAACTCAGTTAGTAATTGAG
CCATAGGGACATTCCCTTTAACGTTTAAAGCAATCACTGATTAAGAGAAA
AAAATTTTCTCAGACAAATGATGAATTGTTATCAATGACATGTTATAAAC
GACTTGCCTCAAATTCAAATATCAAATATGGTTTCTTTACCTTTACTATC
TTCCACCATCATGTTTCCTTCTACAGGGCTTGAAATACCATGTGCATGTG
CACATCTCCAAAATAGGAGATGTGCACCTAATATTTGACTGCAGATATTT
TTGTAGGCTATAGGGTAAAGATACTATTGTACACAAATATACAGAATATT
CTAGAAATTTGAATATCAGAAAAAAAAGAAAAAAACCTTTGTTGTACTTT
ATTTGATGTACTTCTTGTTTGAATTTTGAAGTTAAATTCTATTGCTGTAT
TATAGAGTGAAGTTCTCAAGAGAGGTAGTAGGGTCGAAAATTATGTTTAG
CCATACCTAGTATGGCTCAACATATTGTTTTTACTCAGGTTTCTTCTTCT
TCTCCTGTGAAATCTTCAAATCGATTCATCTTTGTCATTTTTTGACCAAA
TGACCTGAAATTTGGTACAAAGGTAGTGTAGGCAAATACCCACTGACTTT
TTTTCTTCATTTTTTCGATATTGACCTTGAAAGTGATTTTATTGAGGTTT
TTCTGACCAAAAACGTACATTTTGGCCTCCTGTGCTCTGGAAATACATCC
AAATGACCTGAAATTGGCTATGGGGGTACATTGAACAAATATTCAGAGAA
CCCCATTCGCACTTTTGGCAAACATCACTTCAAAATACAATTTTGCAGGG
TATTTTGGGGAGAACATTGGGTATTTTCCTCATATGACCTAAAGGTCAGT
GACCCCGATTGCACCTGGCCTGGCTGTGAGCCTTGCGACCACCCGATTGG
TCAATTGAGTGGTCAATTAAGTTATCTTGCATTTCTGGCGCAGGTGTGCT
AGTATTCATACCAAATGTGGTATGGGAATGCGCAGGACATGTGCTTACAT
GGCTTTGTTCACTCTTTTTTCAACAAAGATACACATCTCCAGTTCCTATG
TAGTAAACCAAAATGATGCAAAATTCGGCATGTGTCTGCCTTGGTCATGT
AGAAATGTTTGGCATACAGCCTTTCAAAACGATTTTTGAAATAAACAATT
TTTTCGTTTCCTTATTTTCAACCCAAATGACTGTATACTATTGAATCATG
CATTCAAACAAAGGGGTGTCACATTTTTATATTTCACCCATACTATCGCT
GCAATATGTTGTTTTTGGTAATTTCCTTCTTCTCCTGTCAAATCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGCGCTAAAATCGGCAAACGCGGTACA
AATGAGCCGATACCTGCCGGTGTAAAGGCGCAATACCGCCAATATGTTTA
AAACTGTTTTGAGTAACAAAAGAAGGCGGTCTCCATTCATTTGACAGTTA
CGTTGATAGGAATGNATTTTTTAGCAGAAGTGTATTTGTTAATCAATTAG
TGGATATGGTTGTGGACTGGTCCATATTGTGTTGAGGTGCTACTGGAAGA
CTCAATTTTGGACTGGGGTGATTCATTTTTTTAGTGCAAGTATTTTAGAA
TGGTCCATTGTTATTTTGGGAGAGTCCATTTTTTGCATGGCGAGGAGTAT
GGCTAAACATGCTGTATTTGCTCGCAAATGTTGCCTTTCTAGTTGATATT
GTTTTCCCGGTATGCCTAAACACCTCACCCGACCTCATCCGACCTCACCC
GACCTCATCCAAGTCTAAAATGCAGTGTATACGGGATAGTAACATTATTT
GACGTTCTTGATACGTTGAATATGCAATTATGAATGCTAAACAAGCAGCA
AGCTCTAAGTATTTACCAGTTTTATAAGTTACTCCGCTCGTTTTTAAGAT
AGAAGATTTCTGGCCGCCATATTGGATCATGCCACTGTTGGGGTCTACAT
GGGGAAGTTCTTCATACCTTTTTTATTTATTTTTGTCCGACAGGACGATA
AGACGGTGGGTGCTAGTTACGTTTTCATCACAAACTACTCATAGTGACTG
TACACAATAACTGTACACAGTATCTGTACACAATAACTGTACACAAAGTG
TTTTTCAGCCTCGAATACACTCACGTAGTGTGTATTCATTGCGCCGGCCG
TCTTGACCTCCCATTACCTATAAAAACTGGTAAATACTTCAAGTTTGCTG
CTTGTTTTGCATTTATAATTGCATATTTAACGTATCCAGAACGTCAAATA
ATGTCCCTGCCCCGTATACACTGCATTTTAGACTCGGATGAGGTGGGGTG
AGGTCGGATGAGGTCGGGTGAGGTGTTTAGGCATACCCTTAGCTTGTTTT
CCTGATACAGTATTCTACTTTATTTAATGCTGTGCACCCGAAATTCTTTC
TATGCACCTTTTTTAGGAAAAAGTGCACCAGTAAACCTATTCCTAAAAAT
GAATTTCGAGCCCTGCTCTGTTTGCAGCACCAGGAACTGCAGAGGGTCCG
CTGCAGGTTAGGAACTTGGAGGCAGAAGACATTGACTTTGTCGCTCGAAT
GCTGGTGGAGGCTTTCAGGGATAAGTTTGAATTTGCAGTTGGAAAGAGTC
GGTAAGATTTCCTTAGAGTGCGTTCAGTTAAATACCTCGGTTAAAGTGTT
TATGACACCAAAATACAACATTTTCTTATTTTCTGTAATAGGAATAGTAT
CATTCAATGAATATAAACGTTAAAAACAAATACACACCCTTCTGATGTTA
TGAGAATTGAACCATAAGAAAACATACTTCCAGCTTTTGATTTTTCTTTG
ATCTCCCCACCAGGTAATTACATTAATCAGTGACTTTACTCTCCCGATGA
CGTCACAATGAACACGGCATCTGGTTCGGAACCTTGCACCATGACTTGTG
AAAAACATTATTTGAAGAGCGAACAGTGTTTGATTATCGTGATTACATTC
AATTAACAAGACATTATGATATTTAGTTTGTTTGTTTCTCAAAAGAACGT
TATTTCCGAGCCACAGAGCAAAGTTCCAAACTGGCTGCCATGTTCATTGT
GACGTCATCGATAGAGAAGTCACCGATTAATATAATTACCTGATGGGAAG
AATCAAAAGCTGGAGGTATGATGTTTTGATGGTTCGATCTTCAATAACAT
CCGAAGGGTGTATATTTTGTGCAAATGTCTATGTTATTATATGGTTATGT
AATTTCAGGATTTTTATTTCTAGTATAATGTCATTGGTGTCTTATACACT
TTAATTCTACTTGAGACTGGTGCAATAGTGGGTATAGGTTGATATGATGG
GCAGTCATCTTAAGCTGCTAAAAAAAAAAGAAAGTGGTCAGGTTTTTATG
AATGAAATTATGAATGAAACACAATAATCTCAAGAACACACACCGGTGAG
AAATACGTTCAGGATCATAAGTTTGAATTTGCAGTTAAAAAGAGTCAGTA
AGACTTTATCTGAGTGTATTGGGACCTCGAGCTCCCAGTGTCTTTGCAAT
TGTTTTTAATGTCTTTAAACACAGTTAACATTGAGCACTACAGCAAGTAC
TTAAGTCCACTGGTAGGTGATACTCTGGGCCGTGATGTTTCAGTGTAAGG
TTGAAGGACAAATGATCCTTAACCTGCTTATACCCCATACTACAGGATTG
AAGCCACAATACAACAACAGGCCAGCTCACTTAGCCGTTCTCCCAATGTT
TGGCACAGATATTATGTGGCATTGTACGAGGGAAAGTTGGCCGGTGCTAT
GTGCATTGTATTTTATGGAGACAGGTTAGTTTGATTATTAGTATTACAAT
TTTTACTTCACCCTTACACACACTAAGGGACTAAAGTACTGTTTTTGTCT
TGTCTGTGCATGTGTGTCTGTGTGAGTACATGTGTGTATATGCATGTGTA
TGAGTGAGTGTGTGTTTGTGTGTGTGTATGTGTGTGTGCAAGTGTGTGTG
TCTGTGTGTGTTTGGATGTGGATGTGTGTCTGTGTCGCTCTGTGTGTGTG
TTTGTGTGTATGCGTGTATGCGTGTGTGTGTGTTTGGATGTAGATGTGTG
TCTGTGTCACTGTGTGTGTGTGTGTATGTTTATGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGACAGCATTCAAAAGGGGCTTGAAG
GGTTGATTAGTACGGGTGATTTGAATTGCAACAGTATCATAATACAATAA
TATCGCAATATCATAATCTCTATCATCATGACATCTTAGATTGCCTCTGT
TATTATACTTTACAATTGATTTATTGGCATTGCTGTTTGTTTCTACAGTG
CTGATGAGGGTTCCCAGTGCTGTGATTCCCAGCTGGGCTATTACGGTTCA
ACCAGGTATGGATGTTTGTAAATGTTGTTGTTGTTGCTAACCTTGTAGTG
CCTAGTGGCACATAAGTCAGCAGGTTTCCTTGCTGTCTCAGTTGCAGGGG
ATATCTTGCTAGCCCTTCCCCTTAAACATTGCTTGAGGCCCCTCCTCAAA
AACAGGACCCCCATTTTATGTCCCTTCCAAAAGATGGGTGCAGCTCCAAC
CGAGATGTCCTGTCACAGAATTGAACCAGGGCCTATTGGTTACCATTGTA
ATTGGGCATCCCCTCAAGACACCTCTTCAAACATGGGACCCCCATTTTAT
GTCTCTTCCGAAAGACGGGGGGTGTCTGCTTCAAATTACTTGGACCAGAA
GGCCCGGGTTCAAGCCCCGGGTAGGACACCTCTGGACAAGAGGCACATTG
AGTTATACCAAAGACTTTAAAAAATGCCATGGTACATACTTCTGAAACAG
TATGGAAGTTAGACACACTCCACTGTCAGTGGACTAGCCCCCTGCTGCAG
TGATTGCACCACAGTGTGGCCCAGGGTTATGAAACGGAGATGGGCTCCGC
CCTATACATCTTATGGTGTGGGAGGACTTTAACTAACTTTCGAAAGACGG
GTGCAGCCCCAACCGAGATGCCCTTCCCAGGATGTTACCTCATCACTTTG
GTCCTTGATTCTGGTGCAAAGTTTTCTTACATCATGAGGGCTAAAAATAC
ATTTTTCTTTTTAGACAACCTGAACCAGCACTAGTACACACTCAGGTACA
TTCAAAGTTGCCTGAACCAAACAAGTTTTACTCTCACTGGACTGCACCTG
TTTGCAATAAATTATTGGGCCAACTGTCCAAAGTTTTCGCCAATTTTCCC
TTGTGGTCACACTGTTGTGTGGGTAAAATATGTGACTGCTACAAACAAAA
TGACTGCCCCTGGGATGTCACATACAAGATTATCCCTTTATTGGAAATCG
TAGTGTTTCAACTGAATTAAAAACAATTAATGTACAATGACCGAGATTCA
TCAAAAAGAGATTTGCAATGACTACACCTACTGGTGCTGTTTGAATAAAA
TTTGACATTTCAGGCAAAAAATTGGCTCCCATTGGTGCTGATTGGCGGCA
GATTGGAGATAATAAGCGCCCTGTTTGTGTCAGTTGGTGAATGTCTTTCA
CAAACAGTTGCAGCGTAGTGTGACCAACAGTGCTTTAGTGCAGGGCAAAT
AATTTTGTGTGTTTGTTTGATTGATTGTTTGTTTGAACCTTTGTTTATTC
ATGATAAGCTCAAATCGGCACGCAGGCCGCTTTTCATTGAGGTCATGAGG
GAAGAGGTACATGTAAGGGTCAGATACAATATAGCAGAGATACACAGTCA
TTTGAGTCCTAATAACCCTTTTTTTAACATATATCATTACATACATATGA
TACAGCAATATACAATTGCTACAACATACAACATATAGTAGGGCGAAAGC
CGTTCGTTTTGTTCATTTCCGTTACTTCAAGAGTCTCTTAAAGGAAGTCA
GATTCCGAGCCGTACGTGTGTCTGGCGGTAGGCTGTTCCAGACATTTGGT
CCGTGGTGCCTGCTACCGATCTACCATAATGAGGAATGTTTTCACAAACT
GTAGGCTCTGGTGTGTACATTGCTGTTTGGACAACTCTGACATGCGCAGA
GGGGAGTGTTACATAGACCGCATCTGTGTGGACGCAGGCTATCGAGGAAA
GGGCATCGGAAAAGCGATGCTGGACAAGGCCGAATCTGAGGCTCGGGAAC
ACGGATCCACGGTAGGCTGGACGGCAAGATGTTTGTTTGTTTGTTTATTT
GTATTGTATACCTGATAAACAGGTTTGTAACACACCAGGTTTGTACTGAT
CAGTATAAGCTGGATATCTTGACAGATTTATTTGATCCTCTCACACCGGG
ATGGATCCTTACTCTTTTTGATAAGTGAGGTGGGTTCCTTTACATGCTGG
AGGTCTGACTCTGCTAAGACACAGGACCTCCTTTTAAAGTTAGAGCTTTT
GCACAGTAATCAGTCAATGGATATCAGGGTACTTGCTGTTAGCTCACTTG
TCTGAATTTGAGCGACCTTGAATTTGCAATGTGTCTTGTCTCGGATAGTT
CTTCTATCTCTTGGTAGGGTTCCAATGTCAATGACACCATGTTAGGATGC
ACTTTCTGTTTATTCACTTTGTCTCTCACAGACGTCCATGTAACTGTGAG
GTCTTAGACCCTCAACTTAGAGGTCTGTCTATTACGCATGCATGTTTGAG
TTTATTATGTCACGTAGGGCTGTGTACCTAAACAAAAATTTAGGTACAGG
TATGGTACAGGTACAGCAGTTTAGGTACAGGGCTGAACCTGTACATGCAC
AAGTTTGGTCAATTATCTATAAGTTAACCATGGAGCCAACTGTTTTTTTA
GTGGTAAATTGTCATCTTTGTATGAAAATTTATGTATTTCAATCTCAAAA
GAAGTCTATTTGCAGGTTTTCTTCATTTTCATCTGTGAGGTTATCAAAAT
TGTCATATCTGTCAAGCGACCTACCTTTAGTCTAAAGAAGGGTGTCCACT
CAAGTGTTTTAGTTTGTTTAGGTACAGGTAGAGCCGTACAGGTACATCAG
ATGTTCAGGTCTGGACCTGTACCTGAATAACTTTACAGGTACAGGTATGG
GTTTTAGGTACACAGCTCTAAATTGTCATTTTTAGTTCATATGCTAATGC
TGCTAACTAGCACCACATGTTACACAACTGATTTTCATTCCAACTTTCTA
CCCAACTATAGCTGATGTCCCTGTGGGTGAAGCAGACGAATCGTGCTGTT
CATCTGTACGAGCGACAGGGCTACAGCATCAGCATGAACTGCTGCTGGCC
CTGCACATGGTTTGCCGTGGGAACTGCGGTGGGTACAATTACAGTGTCAC
CTGTCCGCAGCTAGTCCCCAAGCATATGTAAGGATCCAGCTCATTC Coding sequence (CDS) from alignment at Sc0000280:185908..194403- >Blg00033.4 ID=Blg00033.4|Name=Blg00033.4|organism=Branchiostoma lanceolatum|type=CDS|length=684bp|location=Sequence derived from alignment at Sc0000280:185908..194403- (Branchiostoma lanceolatum)
ATGGAGTCTGATCCAGGTGCTCAAAGTGAAGCAGCTGTGCTGCCTGTGCT
TACAGAACAACCAGCACCAGGAACTGCAGAGGGTCCGCTGCAGGTTAGGA
ACTTGGAGGCAGAAGACATTGACTTTGTCGCTCGAATGCTGGTGGAGGCT
TTCAGGGATAAGTTTGAATTTGCAGTTGGAAAGAGTCGGATTGAAGCCAC
AATACAACAACAGGCCAGCTCACTTAGCCGTTCTCCCAATGTTTGGCACA
GATATTATGTGGCATTGTACGAGGGAAAGTTGGCCGGTGCTATGTGCATT
GTATTTTATGGAGACAGTGCTGATGAGGGTTCCCAGTGCTGTGATTCCCA
GCTGGGCTATTACGGTTCAACCAGGCTCTGGTGTGTACATTGCTGTTTGG
ACAACTCTGACATGCGCAGAGGGGAGTGTTACATAGACCGCATCTGTGTG
GACGCAGGCTATCGAGGAAAGGGCATCGGAAAAGCGATGCTGGACAAGGC
CGAATCTGAGGCTCGGGAACACGGATCCACGCTGATGTCCCTGTGGGTGA
AGCAGACGAATCGTGCTGTTCATCTGTACGAGCGACAGGGCTACAGCATC
AGCATGAACTGCTGCTGGCCCTGCACATGGTTTGCCGTGGGAACTGCGGT
GGGTACAATTACAGTGTCACCTGTCCGCAGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00033.4-exon-Sc0000280-1570713199:194130..194403 | Blg00033.4-exon-Sc0000280-1570713199:194130..194403 | Branchiostoma lanceolatum | exon |
| Blg00033.4-exon-Sc0000280-1570713199:193728..193807 | Blg00033.4-exon-Sc0000280-1570713199:193728..193807 | Branchiostoma lanceolatum | exon |
| Blg00033.4-exon-Sc0000280-1570713199:190603..190726 | Blg00033.4-exon-Sc0000280-1570713199:190603..190726 | Branchiostoma lanceolatum | exon |
| Blg00033.4-exon-Sc0000280-1570713199:189430..189558 | Blg00033.4-exon-Sc0000280-1570713199:189430..189558 | Branchiostoma lanceolatum | exon |
| Blg00033.4-exon-Sc0000280-1570713199:188849..188905 | Blg00033.4-exon-Sc0000280-1570713199:188849..188905 | Branchiostoma lanceolatum | exon |
| Blg00033.4-exon-Sc0000280-1570713199:187093..187249 | Blg00033.4-exon-Sc0000280-1570713199:187093..187249 | Branchiostoma lanceolatum | exon |
| Blg00033.4-exon-Sc0000280-1570713199:185908..186092 | Blg00033.4-exon-Sc0000280-1570713199:185908..186092 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000280 | genome | Sc0000280:185908..194403 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00033 |
|
