Blg00031.1 (mRNA) - B. lanceolatum

Overview
NameBlg00031.1
Unique NameBlg00031.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000280:262793..265570+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00031.1 ID=Blg00031.1|Name=Blg00031.1|organism=Branchiostoma lanceolatum|type=mRNA|length=2778bp|location=Sequence derived from alignment at Sc0000280:262793..265570+ (Branchiostoma lanceolatum)
TGTAAAGTGCCTTTCCCAAGGGCGCAACATTATAGCATATCACGGGTTAT ACATATATTCATGACCACTTCAGAATCAAACTCTCAAAAGAAAACTGCGT GGCCGCCAGTGGCACCGTGACAGTGACCCATTACTTTACTCCTGTAACGC GATACCGCCGGCCTATCCCAGTAATGCCGAGCGGCGCCTAGCGGCCGGTA CTTCACTCAAAAGCATTGCGCAGTTCATAATAACGGTCTCTGTGGACAAA CAAGCAAGACGGTACGAAAACATTCCCAGTTCCGTATTCTCAGGTTAGTT AATTGAATTATCGTATCTATTCTTATTCATTGGTTTGGCTGTGATTGACA TGTAACGTTACAGACAGGGCTGCCCAACAGGCTATTGCGAAATGATATCC CTGCTGACAAGACAGTACAAGACAAGATAGTAACGTTAAATCTATGTATG TGAACGTGAACGTTAATGCAATGCGTAAAGGCTTGCTTGCAGTCGAGCTC TAGCACTATAGCTAAAAGAAGGCAGGCTTCAAACTGATAGAATGTTACAT ATAGGACAAAACTTCTCATGTGTCACCGGTGTTTGCAGGAAAACGCAGTT GCCCCTTGCTCTAGTTCATGCGCAATGTTGTTGTTGGTAACACTATTTGA ATTTGATATGTAACGTTATATATAGAGGGGTAGTTACCCTTAGAAATATT GTATGTTGTCGTAAGATCATGGAAAGCACACCCTGGAAAAGCATGGAAAA CCGATGTGGACTTCGATATGTAGTTTAAGTCGTTTCATGTTTGCCTAAAG TCAAGAGAGGACCTCTTTATTTGCACTCGATGGCCGTCTACCACATGCAT GTATGTTCGTATATAAACTGGGCATGGAGCCAACGTGGTGCGTCTATTAG CAGAATGGGGGAGGGGGAGGGCAAGTTGTAGTACGCAGTACAGGGCAGTC GTTACAGTGGAATCTCATTGGAGACCGTTGTGAAAGTACTTACCCAAAGT TCAATCTCAAAAATTCATCTCCACCACACAGCCACAAGGGTATACTTGAT AAACATGCAAAGAGGCTGTTATCCATATCAAACGACGAGCACAGCTGCCG GAAGTCAACAAACCTAACCTTAGACCCAGATTTATAATAGGCTGTATTCA TCCGCTCAGGGCAGGCCTGACCCAACAACACAGACATGTTCTTACGCCAA CTAAACCTGCCCCTTCTAACCAAAAAAAGTCTACAGATTGGGCCAAAATT GTCAAGGAAAATAAAGGTTTTCAAGGATTTTAAGTTGGCACTACAATTTT TTTTGCCTCCACTGCGCAGGTACACTGTAACGTCTACCCTACAGTTCACA TACAATTAATGACAAAATAAAAACTTATTAAAGCACATTTGAAAATATAC CATGGATATTGCAGCACAGTGGAAAACACACCTTGGATACAATGTACACA AAAGTTGCTGCAAATTACCTTACTTGCTCTAACGTTAACATTGATTTTGT TTTCTGTTTTCGGAAAAAGAGGACAAATCAACATTAAATATGGCGGAGGA AAGCGAGAAAAGGGTTCCGAGAACCAATAAGAAGCCGTTTAAGAGGCCGG AAATAAAACCTTACAAGGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTATG TTTTCTTCGCATAGTTGGTAAACTGCCTTTAGGCACAGTAATTTTGTACA GTAGGTACAAGCTGCGTAACTTAGACCAGACTGTACAGTTTGAGCCAATC ACACCGGGAAGGACCCATACTCTTTTCGATAAATGTGGTGGTTCTTTTTT AATGTGCTCGAGGTTGGGCTCTCCTCAAACACGGGACCTCCGACTTTACG TCCCATCCTAACCAAAGCTCTTCTTTTCGTCCAATAAGGAAGAATTTGTG ATTGTAATTTGAGACGATTGATTTGATAAGATTATGAAAAATTTAAGAAA AAAGTTTAAAGCGCCCTTCCCAAGGGCACAACATTGGGGACAGATAGTGA TTCTAACCCAGAACCTTTGGCTTCTAAGTCAATGACTCTAACCACAAGAC CACTTTGCCGCCTTGTAGATTAAGAACCTGGCGGCGTTTGATGCGAAACT GCCGGTGTGCCACGGGGAGTCCCTCATGCTCCCGAGGGAAGACAGACTCG CCATTGCCGTGCCGAGAAGTACCATCACCCCCGACGTAGGTTTTTTTCTT TCTTTTAAATTAGTACCTTCGCCAGGAAGGTTGTATTTTTGGTAGCGTTT GTTTGCAGCACTGTGCATCTGTGGTAGAACAGTATAACTCAAGAAGAAGC AGACGGATTGTCATGAAATTTGGTTTGTGCCTATAGAAGAAATTAACTTC TGGCGACTTTGCCTGGCACTGCAGCAGAACTGACTTGCTTCTGTATCTCG TGTTCTAGGCATGCTATGGACTTAGTTAACAATAGAACCTAATACATACA AACTTAGAAGGAAACATAAATATCTTAGGAATTAATTGAGACGTATATGA CAAAGGCAAAAAAGGTAAATACATGTACATAAACTATACCATATATATCT GATGTCACGTGATCTTGTTTCAGATGAGCCCGGAGGATTGGGTGAGGGCG TACATACGCATGCGCAATGCCACCATGAACTACGACAGGCTGTTTGTGGA GATAGTGAACTACCTGGAGAAGGGACCGGAAGATTTCGACAAAATGGTCA GTCTTCTGTACATATAAATTGAAGATGAACAGCACTTTATCCTAGATTGT CCATGATATCATGATAAACGCTCAAAGC

Coding sequence (CDS) from alignment at Sc0000280:262793..265570+

>Blg00031.1 ID=Blg00031.1|Name=Blg00031.1|organism=Branchiostoma lanceolatum|type=CDS|length=339bp|location=Sequence derived from alignment at Sc0000280:262793..265570+ (Branchiostoma lanceolatum)
ATGGCGGAGGAAAGCGAGAAAAGGGTTCCGAGAACCAATAAGAAGCCGTT
TAAGAGGCCGGAAATAAAACCTTACAAGATTAAGAACCTGGCGGCGTTTG
ATGCGAAACTGCCGGTGTGCCACGGGGAGTCCCTCATGCTCCCGAGGGAA
GACAGACTCGCCATTGCCGTGCCGAGAAGTACCATCACCCCCGACATGAG
CCCGGAGGATTGGGTGAGGGCGTACATACGCATGCGCAATGCCACCATGA
ACTACGACAGGCTGTTTGTGGAGATAGTGAACTACCTGGAGAAGGGACCG
GAAGATTTCGACAAAATGGTCAGTCTTCTGTACATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00031.1Blg00031.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00031.1-exon-Sc0000280-1570713199:262793..263085Blg00031.1-exon-Sc0000280-1570713199:262793..263085Branchiostoma lanceolatumexon
Blg00031.1-exon-Sc0000280-1570713199:264314..264409Blg00031.1-exon-Sc0000280-1570713199:264314..264409Branchiostoma lanceolatumexon
Blg00031.1-exon-Sc0000280-1570713199:264861..264977Blg00031.1-exon-Sc0000280-1570713199:264861..264977Branchiostoma lanceolatumexon
Blg00031.1-exon-Sc0000280-1570713199:265366..265570Blg00031.1-exon-Sc0000280-1570713199:265366..265570Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000280genomeSc0000280:262793..265570 +
Properties
Property NameValue
GeneIDBlg00031