Blg00028.0 (mRNA) - B. lanceolatum

Overview
NameBlg00028.0
Unique NameBlg00028.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000280:274917..276583-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00028.0 ID=Blg00028.0|Name=Blg00028.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1667bp|location=Sequence derived from alignment at Sc0000280:274917..276583- (Branchiostoma lanceolatum)
ATGGGACAAAAAGACCAAGGTACAGTGTCTTCTGTACAGGCCTACCTGCT TGCTGGATTTCACGTTATTCCAAGCTCTAGTTTTGGAGATATTCATGTTT CTTATTTGTGCGGAGAAGAGGAAGAAGAAGAGGAAACGTAGCAAAAACAA TATGTTTACTTCTGTGAAGGTTAACATAACTATTTGTCATCAACAAACAT CCATTAAAACTAACCTTTACACCGTCGCCATGGCAATACTTTTTCATTGC CACTCTTGTTTATTTTTTTCTTTCAAGTAAGCCACCATCGGAAAAAGTGG CTATAAGGAAGCCACCAAAACATTATCTTTCGCCTAAGGCCACATCACGT TGAGAACACCCGATCCCGTTCGGTTCGTTGTTTAAAGGGGGACATCTGTA GTGAATGAATTGGTGAGGGAACAGTGATATTTTCCTTTTTCGAATCTTTA GAGCGTCGTTTGTTTACAAGAGTTGTATGATACTAACCATATTTTCATGT ATCATTTCTTTCTCATTTGTTTTTCAGGATTTCGAAACGCCAGATTCATA AAGAAACCCTCTCTTTAGAGACATAAAAATAAAAATAAAACAATTATATA AAGGAATATAGCACACAAGAAGTTCAAAAGGGATTAACGAAAAACAATCA AGGGGGAACAAGAGACGAATCGGTGTACATTAGTTCAAATGTGAAAATGA AGTGTATTATTTCAGTAGTGTACTGTCATTGTGCTGCTGTATGTGTACAA TATTTTGATTTATATCTAATGTTCCCCGTCTATCCATCTTTGCAGGTTGC GGCTTTAGCGCTAGAAATAGCAACCCGACCATCTGTATCAATGACCTGGT GAAACAACACAACAAACTCCACGACAAAGACCTCCCTGAGTTCACCACAG AGGAGCTCATCGCACGGGCGGTAACCATCACGGAGGGGCTCCTGCAGCAG TTCCAAGAGGACGGCAGTGGCGCGTTCGGCTTGCAGAGATACTACAAGTA TTGGCTTCACAGGTGAGAAAGTAACTGTTACATGCTCAAGACATACAAGA TCCGCACTGCTTTGATCATCAGGCACATGGATTGTGAGCTAGGTAACATT TATCACCTTTAAGTTCAGTTGTATCACTACGCTAGTCAGCCCACATAGCA CAGGAATTAAAGAACCACAGTTCAGCTCACGAATATGTCTTTTTTTGCGT CATTAAGGACAACAATTACCAGTCCCAATGACGCAATGTTTCAGCGTAGA AATTCTTACTCTAGCGACATCCGTGCCGTGTTTATATGTAACCTTAATTT TGGAATGTTAACTCTAAGATGTACAATCCACTCGCGATCGTTGAATCGTC ATTATTTACAAAATAACCTCCCCTGATTGTTCCAATGTAACATATAGATA AGTAGGTTGACAGTGATGAACGTGGACTTAAAGTTCCATGTCTAGAGCCA TTACTACTCCTAATTTTACTGTTTCTTCTCTCGTTGCTCCAGTAAGCAAA GGGTCCACCTGGATATTGAGACTGGACCGCAGGCGACTATTGCGGGGCTT GACCACTCAGGCTCCCTGTATGTGGCCATGGAGGATGGAGAGGAAGTCAG TGTAGAGCCAGACGGCAACAGCTTTGACATGTTCAAGAGCCTTATCACCA AGAAGACTCGGCCATAA

Coding sequence (CDS) from alignment at Sc0000280:274917..276583-

>Blg00028.0 ID=Blg00028.0|Name=Blg00028.0|organism=Branchiostoma lanceolatum|type=CDS|length=411bp|location=Sequence derived from alignment at Sc0000280:274917..276583- (Branchiostoma lanceolatum)
ATGGGACAAAAAGACCAAGGTTGCGGCTTTAGCGCTAGAAATAGCAACCC
GACCATCTGTATCAATGACCTGGTGAAACAACACAACAAACTCCACGACA
AAGACCTCCCTGAGTTCACCACAGAGGAGCTCATCGCACGGGCGGTAACC
ATCACGGAGGGGCTCCTGCAGCAGTTCCAAGAGGACGGCAGTGGCGCGTT
CGGCTTGCAGAGATACTACAAGTATTGGCTTCACAGTAAGCAAAGGGTCC
ACCTGGATATTGAGACTGGACCGCAGGCGACTATTGCGGGGCTTGACCAC
TCAGGCTCCCTGTATGTGGCCATGGAGGATGGAGAGGAAGTCAGTGTAGA
GCCAGACGGCAACAGCTTTGACATGTTCAAGAGCCTTATCACCAAGAAGA
CTCGGCCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00028.0Blg00028.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00028.0-exon-Sc0000280-1570713199:276565..276583Blg00028.0-exon-Sc0000280-1570713199:276565..276583Branchiostoma lanceolatumexon
Blg00028.0-exon-Sc0000280-1570713199:275572..275788Blg00028.0-exon-Sc0000280-1570713199:275572..275788Branchiostoma lanceolatumexon
Blg00028.0-exon-Sc0000280-1570713199:274917..275091Blg00028.0-exon-Sc0000280-1570713199:274917..275091Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000280genomeSc0000280:274917..276583 -
Properties
Property NameValue
GeneIDBlg00028