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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000280:206266..211984- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00027.5 ID=Blg00027.5|Name=Blg00027.5|organism=Branchiostoma lanceolatum|type=mRNA|length=5719bp|location=Sequence derived from alignment at Sc0000280:206266..211984- (Branchiostoma lanceolatum) AAAATACATTGCATTTTTTATTTCCTATATTTGCAGCACCAGGAACTGAG
CCGGGCAGTCCGCTGCAGGTCAGGAACATGGAGGCAGAAGACATCGAATT
TGTCTCTCGAATGTTGGTGGACGCTTTCAGTGATAAGTTTGAACACGCGG
TTGGCAAGAGTCGGTAAGATTTCCGTAAAGTATATTCAGTTTCATGCGTT
GGCTAGAGCCCTCTCCATTAAATATCTTCTAACCCTTTCTCATTTCTCAG
TGGCTTTTTGAAAGCACAAGCTCATTAGTATGTTTCACAAATGCCTCAGC
TATGATTAAGTGAAATGCAAATGAGCACCTCTATATATCATAACAACACA
CACGCCAATAATGTCACATATGAAAAATGTCGTTCTGTAGGATGGAAGGT
GCGGTCCAACAGACAGTCGCTTCGCTGGGCAGGTCCCAAGACGTCTGGCA
CAGATATCGCGTCGCCGTGTACGAGGGCAGGCCAGCAGGCGCCATGGCCT
TCAAATTTCATGGAGACAGGTCAGTTTATAGGACGTATGTTGGAAAGCTA
AAAGAAATACATGTCTTGGCTAGCGGCCTCGTACTATATATAAATCACAT
ATTGCACAGGTATACACAATTACACATATCGAAGCATTTTAACCTTGATT
GTGGGCATGTTATAAGTTCTGTGAAGAACCAAAGCTTAGGATGCCGCTCC
GTTTCCTTGGTTTCCTGCATGTTGCTCTGATTCTGGCTGGAATCTAAACC
ACTAGAATCTAAATTCCTTTATCTGCTGCAGCGCCATGGGGGATTTCAGC
TGCGGGGAGGCGTGCTCATTTCTTGGATGTGGCACGTGTGGGTATGTATC
TTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTGTATGAACAGTAAACCAT
CTTGTTTTGCAATGCAGGAGTTTTGTACTTGGATTTTTATCGTATACGCC
TTGCTGTTCATGGAATAAGACAACGGCTGAACGATTAAATATGTTCGTAT
TGCATTTCTACATTTAGTGCACGGTGATTCGGACTATGAGATTAGTCCAT
TGTCACAGTTTACTGACGTTAGGGCTCCGTCATATGCATACTTGTGCGTA
TATTTAAGTGCATTACCAGTTGCACATTAACATTTTTTTTTGGTTTAAGT
AAGGTTTGCGGGAAAAAGTTGTTTTCTGCTTTGACTCACCGTTGTGCAGC
CTATAGCTAGTGATTGAACCTAAGAAATCACTTATTCGGCTGCAAACTTA
ACATAAACCCAAAAACATGTTAATACGCAACCAATGCGGACTTGTATATA
CGCACAGGTGTGACAGGGGCTTTATGGCGGGTTGTTTCCATGATGTCTTT
TAAACGCTTACAGGCTCATCTGCATGGGCGCTGCCTTGGAAAACGACAAC
ATTCCTGTGGGGCAGTGTTACCTGGACCACATCGGCGTGGACGCGAGCTT
TCGCGGGAAGGGCATCGGGAAGGTGATGCTGGATAGGGCGGACTATGAGG
CCAGGCAACATGGGTGCACAGTACGTAGGCTGAATAGCCAATAACAGAAA
CATCTTTTGAAATAATCTATGCTTGTGTTTAGTGTAACGTCAAATGACAG
TCACAGTAACTGGATAGAATTTGAAAACAGTCAGACGTTTCAGACAGCAT
CCGCTGTCTTTCGTCAGTGATTAAAGGGGGGTAACTGGAATAAGCAGGTT
TTAAACCAAAACTCTATAGATATGTTGATCACGTGAAGACAATTTTAAGT
ATCACGTTGTTTAAGGTTTGTTTTAACATAAAACACTGGGATATTGTACA
TCTAATACAGAAATGTCTACATCCATATTAAAAGATTAATGACAGAAAAA
TTACCATGCTACAAAAGAAAAAGCATACTTTATGCATTTTTGTCTGACAC
CAAATTTTGCTGTTACAGGGTATGTCGGACAACCCGGCACCATGTCAATA
GGACTGTTTCTAGTCATTTTGCAGTCAAGAATACGCCTAACTCTAACCCT
AACCTAATTCTAACTCAGGCCTAACCCTAATCCTTACTCTAACCATAACT
CGAGTCGTCCTGGACCTGGTGCCGAATCGTCCTGATTGGCTATGTGCCGA
ATAGGCCGATTCTGACAGTCTATGACAATTAGCAGTTCAACCAATGATAG
CATGGCAAATGGCATTCAACCAATGAGACAGCGGTTGCATGTCGGTCAAT
ATTTGAATTTTCATGTTTTTAGTTTGCATTTCTACGTTGTGATGAAGGTA
AAATAAATGATAATTTAACGGTTGACAGTGGCAAACGTGCTAGATGTTGC
ACATCGGCAACCAAATCTGCAGTGTGTTTTTTGGCACACAGTTTGACAGA
TTAGCCGAATAGGCTCGGTGGGCGTCACTCCACCGTCCGGAAAGGTAGTG
TAAAGTGCCTTTCCCAAGGGCACAACGTCGGGGCATGGTGAGTATCGAAC
TCGGGACCTATTGATTCCGAGTTCAACGCTCTAACCGTTACGCCACGCCG
ACGTCACTAGCATTGTGATGAAGGTGGACCGGACTATGAGATCTGTTTAT
TGACCTGATACCGTCACATTGTCTCAAAGAAGTTTTAATTGGTATTTCAA
ACTTAATGTGGTTGGTGCTCCTTCTTTTTCTGGAATCCGTGAATGAACGA
ATGAATGAATGAATGAATGAATGAAAACTTTATTATCGTGTCTTGCGACA
TTTTGCGCCCAGCCCATGCGGGCTTTTAAGACACCGTATATCTTACATTA
AATGCATAAAGAAAAGATCAGGAGTACATTGATGTCAAACGTTCTCTTTT
CTTACAACCACAGGCGATTTTCCTGTGGGTGAAGAAGGGCAACCGTGCTG
TTCACCTGTACGAACGTCAGGGCTACGTCATCACCCATACGTTCGGCGGC
TGGTTCAAGCGATGTGCGACGGGCTCCAGAGTGAGTCTGATTCTCACTGT
AGCGTAACATCTTCCATCTTCTTACTTCACTCTTACGTGTTGTTTTTCTG
TTTGGGTGACTGGTTGTCTTTGTCTCTCTCTCTATCTCTCTCTCTCTGCA
TTCCTCTCCTTACGATCGGATGTCACCCAGACTATCTCTCACTCACTCAC
TCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCGCTC
GCTCACCCACTCACTCACTCACTCAGTCACTCACTGCCATGTATCCTCCG
TATTATGCTTATTTCTATACATGTGAAGCCAGTGTCTTCGGTGCCTTGTA
TGTGCTTATAGATATATCTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGCGTGTGTGCTTGTGTGTGTTAGAGAGTGTGTGTGTGTGTG
CGTGCGTGCGAGTGTGTGGTCTATTTTTGTGTGCGCGTGTGTTTGCATGT
GCGATTTGTGTTTGTCCATGTGTGCTATGCTGTTATTCCACTTTTGAAAT
GTTCTGCCCAAACTGCAGGACTGGCACAACATGGAGAAGCAACTGTAACG
CCCCGGAAATGACGTCACAACAACGTCTCAAGTTTCCATCTTGTCACAGA
GATGTGATGACCACAAGGCTGATACTAAAGGAAGGAAGAAACAGTTCCGT
CATGCATGCACGCATATATACCAACATTCCCTGAGTGACGTGTTCTTTCT
ACAAATTAACAATCTATACAGCCTTATCTTCTAAACGTGCTTAGGGCCAT
GTCACACTTGTGCGTATATTCAAGTGTGCGTGAGTTGCGCAGTAACATTT
TTTTGGTTTAAGTAAGGCGAAAAAGTTGTTTTCTACTTCGACCCACCGTT
GTGCAGCCTAGTCATCGAACCTAAGAAATCACTTATTCGGTTGCAAACTT
AACCTAAACCAAAAACACGTTAATACGCAACTCATGCGGACTTGTGGACA
AGTGTGACAGGGGCTTTATGTTTAAGTCCGTATGAGTTCCGTATCAACAT
TTTTTTGGCTTAGGTAAACAAAAGTTTTTTCACCCACCGTTTTGCAGCCT
GGTTTAATATAGAACCGGAAAATACTTTTTCGGCCGCAAACTATACCTCG
CACAAAAAATGTGCGAAATGCATACGGCCAGAATTATACGCACAAATATG
AACGGGCCCTTTGATAGGCCATGTATTTAGATATCAGTCACTTTTCAATG
AAGGCTTTCAAGTAGAGATGATAAGTAAAACCAGACACTATCATGGTACA
AACTGATTCCACTTGTGTTCACCTTTTTGTTTGCAGTTGAAAAAGTCCCT
CGACTTTCAGAATGAATTTGTGAACTTGTTTTGTGTCAAAATAAACTGAA
CTATTCTATCAACAGTCTCCCTGGTTAGAATTTACCCGGGATCCGGTAAC
AAATAGGCGCCGTAAGCTAATCGTGAAAACACCGAGAGGTACCCCCAGTT
ATGCTTCGATCCCAATTGCAATCCGGGGCCCGGCCGGGCTGTTTGCGAAA
ACGGAAAAAAAAATGCATATCAAGAAAGTATACATTATATGGTTAGGAGT
GATTTTTTTCGTTTTGTATCTTTTGTTGTCTTTTATTTCATACTTTCTGT
TCCAACTAGCTGCCCGGCCGGGCCCCGGATCGGAAATGGGACCAAACCAT
AACCGGCAGTCCACCGGGACTACAGCCCCTACGTACGAGCACGGGTGAAA
AGTTGACCGAAGTATTACAGAGGCTCCGAGTAGCATATCACGATGCCCTT
AAAATCTCGTTGTCCCAACCCAGGTATACCAGCAACAGTCTTTGTTTTGT
ACAGCTTGGTGTTGACCGGGAGGCGAAAGTTGACGCATTGTTTCGTCGCC
TCTTGGTGTCGGGAACGACGTCATCAAACGTCTGCTATATTGAGCAGCAT
TCTCTTCGAATAGGTCCTGGTATTAATACTGTCACGTTCGCTGTAAGAGG
CCGCTTACTTTGAATGTCGCTTTTATGTAGTCATTGTAAATACCTGTAGT
TTTTTTTAGATGTTTGTATGTGTTGATGTATGGGTCTGAGGAAAACAATA
AATATGTAAAATGAATTCATCCAAAACTCTGTGAATTGGTATGCTATACA
TAGTAAGGTGAAGTCTATTCTAAGATGGTTCAATTGAAGACGGCATCAAG
ACAAGGTTGTATGCTGATAAGTTAATTGTGTTGTTTTAGCACAGGCTCTA
ATGTTGTCTCGTAGGGTGGGAGGGCAGAAACTAAGTGCTGGAAAGTTCGA
CACGAAGGCCTCCTTTCCTGTACTACACCCAATCCCATAATAGTCTACCT
CATTTCAGTCAGTTAATGTAGGGGCTCTGCCCCCTCCACTCAAAGAGGAG
GAAATCTTAATTATCATGTAATTACAAGAAATATTCAAATATTCATAACT
TTGATTATAGTTAGACATTTCACTAATTTTAGGAGCCTCTAAATGTAGAA
CATGTAACTGCTATGTTTTGCACTTGACGAAAACTATATATGCATGCTAG
ATATACATAAGAATCTTGACTATTTTAATTGGTACCTGTGACTTATTGAC
AACAATAGATGGGACATTAGAACGTTCTTTTAAATGAATAAATGAAGCAC
TTTATTGTAAACCCATGCTTCGAATGGCTAGGCGCAGGTCGTCTACGTAT
GAGTTAACAAACGTGTAAAAAACATATATGTAGAAAAGTAATATGTAAAG
GCAAGAAATACACCAGTTAAACCATAGGCGGTGGGCCACCGAAATTTTGT
TGAAAATTTTTTAGTCTAG Coding sequence (CDS) from alignment at Sc0000280:206266..211984- >Blg00027.5 ID=Blg00027.5|Name=Blg00027.5|organism=Branchiostoma lanceolatum|type=CDS|length=579bp|location=Sequence derived from alignment at Sc0000280:206266..211984- (Branchiostoma lanceolatum) ATGGAGGCAGAAGACATCGAATTTGTCTCTCGAATGTTGGTGGACGCTTT CAGTGATAAGTTTGAACACGCGGTTGGCAAGAGTCGGATGGAAGGTGCGG TCCAACAGACAGTCGCTTCGCTGGGCAGGTCCCAAGACGTCTGGCACAGA TATCGCGTCGCCGTGTACGAGGGCAGGCCAGCAGGCGCCATGGCCTTCAA ATTTCATGGAGACAGCGCCATGGGGGATTTCAGCTGCGGGGAGGCGTGCT CATTTCTTGGATGTGGCACGTGTGGGCTCATCTGCATGGGCGCTGCCTTG GAAAACGACAACATTCCTGTGGGGCAGTGTTACCTGGACCACATCGGCGT GGACGCGAGCTTTCGCGGGAAGGGCATCGGGAAGGTGATGCTGGATAGGG CGGACTATGAGGCCAGGCAACATGGGTGCACAGCGATTTTCCTGTGGGTG AAGAAGGGCAACCGTGCTGTTCACCTGTACGAACGTCAGGGCTACGTCAT CACCCATACGTTCGGCGGCTGGTTCAAGCGATGTGCGACGGGCTCCAGAG ACTGGCACAACATGGAGAAGCAACTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00027.5-exon-Sc0000280-1570713199:211822..211984 | Blg00027.5-exon-Sc0000280-1570713199:211822..211984 | Branchiostoma lanceolatum | exon |
Blg00027.5-exon-Sc0000280-1570713199:211466..211594 | Blg00027.5-exon-Sc0000280-1570713199:211466..211594 | Branchiostoma lanceolatum | exon |
Blg00027.5-exon-Sc0000280-1570713199:211144..211203 | Blg00027.5-exon-Sc0000280-1570713199:211144..211203 | Branchiostoma lanceolatum | exon |
Blg00027.5-exon-Sc0000280-1570713199:210465..210621 | Blg00027.5-exon-Sc0000280-1570713199:210465..210621 | Branchiostoma lanceolatum | exon |
Blg00027.5-exon-Sc0000280-1570713199:209055..209171 | Blg00027.5-exon-Sc0000280-1570713199:209055..209171 | Branchiostoma lanceolatum | exon |
Blg00027.5-exon-Sc0000280-1570713199:206266..208516 | Blg00027.5-exon-Sc0000280-1570713199:206266..208516 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000280 | genome | Sc0000280:206266..211984 - |
Properties
Property Name | Value |
GeneID | Blg00027 |
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