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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000280:206266..214153- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00027.1 ID=Blg00027.1|Name=Blg00027.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7888bp|location=Sequence derived from alignment at Sc0000280:206266..214153- (Branchiostoma lanceolatum) AAACAGCCTAACCACGCATCTGCTTGGAGCCATTGTATCGGTTGCTAGGG
GACGCGCTAGCCACTGCGCAAGTCCGGAAGTAAAGACCCAGTGTCACCGT
TCGTGCGGACGCCAGAAGCACTCGGCGCAAATTATTCGCTCAAGAAACGT
ACAAGTTTGACGGTATGTCGTCTTAAAATGCTCTAATTGTCTTGCAGTTT
TGTTAGAATCTGACTTAAGATAGCTGTCGTCGGTGAACACAGTTCCTGTT
TTCCATAACGATGTGTATATTTGTTGTTTTGACCAACAACAGGTTGTTTT
GGCTCGTTATACCTCGGTACGCGGTATCAAATTGGCACAATACAAATTTA
AAGCAGCAGCTGGACAGATCATTGTAAACGGTCAGACGTTTCAGATAGCA
TCCAATTTCTTTCGCAGTGACCGAGGAAAATCCAACAGGTGGTATTCTAT
AGTATAGAGCAAAAACTATGAGTGACTTAATATTGTACTAAATCGTTACT
CTCCAAGCAGAGGTTGGTCTCTGGCTGGTTTTTGATGTGTTTCTAGGCGT
TTTTGTCGGGCTTTCTATTTTGTCCTGTTTTCTCTATGTCACCAGCCCAC
ATAAAGAAAACGTGACCAAGTAGAAAGATCGACAAAAACGCCTAAAACAC
GTCAAAACCTCTGCTTGGAGAGTACTGAATCGCCAATAGAAAACACACTG
TAAGGTACAGGTGTAATACGATCACGAAAGTAGGTCATGTAAACAAGATG
GCTAATGGAAATTATTTAATGCTAAAAATGATATTGGTTTAATTCTGTGC
CTAAATCTGCATTGAATTTTATTTGGCAAAGATTCCAGTCTCAGCCATGT
ACTAAAATGTTGTTGTCCTTGTTTAAAGTCTATTGTTTCGCTAGACATGG
TCTCTTGGTGCTGGGTTTCACTTGGTTCAGTTACAAAATGCAAAGTCATT
GTCTCTGGTGTTTACGTATTGGTGACTTGTGCTTGTGTTTAGCTGGAAGT
GTTTCTAGGAGAGCGCGTCGAGTCTGTGCGTACTCTCAATGTACGTAAGG
ATTTCCACGGCCACGGGTACCAGGTGTGACGCCAAATTTCTGCCCCGCCA
GATTTCTGCTTCGTATGGTTGGGGATTGGTTTAGAGCTAGGGCTAGCAAT
TAGGATTAGGGTCGAGTTAGGGTTAGGGTTAGCCTCCACAGAGCGACCCC
TCCTTCCAAAGTTCTAACAGACTTCTGCTAGGAATATTAGCCCACTCGTA
GATTCGAGTCCGCACGTGCAGTGTCAAAGGTGAAGGCCCCTGGCTTGTAA
ACAGTTCTTGTTTCGATATTGTCTTTTGTTTGCAAAGCACTGCCCAGACG
ATTTTGGTTACGTCTAAAGGGCCTTCACCTTTGATACTGCGCATGCCTAC
TTGAATCTACAAGTGGGCTTATTTACCACGCAACAAGAGTATGATCCACT
TCTTTCACTTCAGGTATACTGAAAAACCCCTAGCAGTGTTGGGGCATTTA
TTTGGCAGGGGACTGAATGACTGCATTACTATTACAGTAACCAATGTATC
AAAAGCATTAGACAGGATACTGAACATAAAGATTCCCCTTTGGTTCAAAT
GCACAGGACAGAAGAGTCGAGACATCTCCAGAGATATCATGGCGGTTGAA
CCTGTAGTTGCTCAGCCTGGAATGGCAGAACTGCCCTCTGAAACAGGTTT
GTATCAGTATCTAATATCAAGTCTCATAGTTCTGCATGTTCTGCATGCAA
GCCACACTTTGAAAAATAATGGTGAATTATTAAAAAAGATGTGCTAGATG
CAGCGTTAGCAATCCCCAAAGATGGCACACGTCGGATATCCAGGTGTTCA
AAGTCCTAGATAACACGGTCTTAGGATAAAAGAAAATTTGGAGCTAAAGC
CACCCTCTCATTGGACCCGGGGCACGCTGGCGGCGTCGCTGCATCCTAAA
CTGGATTTGTGTTACCCTTGACTTTATAATGGGAATATCGTTCAAAACGT
ACAAGTATGACCAAAAAGACAACAAAACACACATTAGCTTAAAAATATTC
GTTTTTTGTCGATGAAATTCGATCGGCCGCAGCGACGCCGCCAGCGTGCA
ACGGGTTCAGTGAGAGGGGGGCTTAAGAACTCCGGCGGTATTAAGTGATT
TGTGATTACCACCCTGATGAAAATACATTGCATTTTTTATTTCCTATATT
TGCAGCACCAGGAACTGAGCCGGGCAGTCCGCTGCAGGTCAGGAACATGG
AGGCAGAAGACATCGAATTTGTCTCTCGAATGTTGGTGGACGCTTTCAGT
GATAAGTTTGAACACGCGGTTGGCAAGAGTCGGTAAGATTTCCGTAAAGT
ATATTCAGTTTCATGCGTTGGCTAGAGCCCTCTCCATTAAATATCTTCTA
ACCCTTTCTCATTTCTCAGTGGCTTTTTGAAAGCACAAGCTCATTAGTAT
GTTTCACAAATGCCTCAGCTATGATTAAGTGAAATGCAAATGAGCACCTC
TATATATCATAACAACACACACGCCAATAATGTCACATATGAAAAATGTC
GTTCTGTAGGATGGAAGGTGCGGTCCAACAGACAGTCGCTTCGCTGGGCA
GGTCCCAAGACGTCTGGCACAGATATCGCGTCGCCGTGTACGAGGGCAGG
CCAGCAGGCGCCATGGCCTTCAAATTTCATGGAGACAGGTCAGTTTATAG
GACGTATGTTGGAAAGCTAAAAGAAATACATGTCTTGGCTAGCGGCCTCG
TACTATATATAAATCACATATTGCACAGGTATACACAATTACACATATCG
AAGCATTTTAACCTTGATTGTGGGCATGTTATAAGTTCTGTGAAGAACCA
AAGCTTAGGATGCCGCTCCGTTTCCTTGGTTTCCTGCATGTTGCTCTGAT
TCTGGCTGGAATCTAAACCACTAGAATCTAAATTCCTTTATCTGCTGCAG
CGCCATGGGGGATTTCAGCTGCGGGGAGGCGTGCTCATTTCTTGGATGTG
GCACGTGTGGGTATGTATCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG
TGTATGAACAGTAAACCATCTTGTTTTGCAATGCAGGAGTTTTGTACTTG
GATTTTTATCGTATACGCCTTGCTGTTCATGGAATAAGACAACGGCTGAA
CGATTAAATATGTTCGTATTGCATTTCTACATTTAGTGCACGGTGATTCG
GACTATGAGATTAGTCCATTGTCACAGTTTACTGACGTTAGGGCTCCGTC
ATATGCATACTTGTGCGTATATTTAAGTGCATTACCAGTTGCACATTAAC
ATTTTTTTTTGGTTTAAGTAAGGTTTGCGGGAAAAAGTTGTTTTCTGCTT
TGACTCACCGTTGTGCAGCCTATAGCTAGTGATTGAACCTAAGAAATCAC
TTATTCGGCTGCAAACTTAACATAAACCCAAAAACATGTTAATACGCAAC
CAATGCGGACTTGTATATACGCACAGGTGTGACAGGGGCTTTATGGCGGG
TTGTTTCCATGATGTCTTTTAAACGCTTACAGGCTCATCTGCATGGGCGC
TGCCTTGGAAAACGACAACATTCCTGTGGGGCAGTGTTACCTGGACCACA
TCGGCGTGGACGCGAGCTTTCGCGGGAAGGGCATCGGGAAGGTGATGCTG
GATAGGGCGGACTATGAGGCCAGGCAACATGGGTGCACAGTACGTAGGCT
GAATAGCCAATAACAGAAACATCTTTTGAAATAATCTATGCTTGTGTTTA
GTGTAACGTCAAATGACAGTCACAGTAACTGGATAGAATTTGAAAACAGT
CAGACGTTTCAGACAGCATCCGCTGTCTTTCGTCAGTGATTAAAGGGGGG
TAACTGGAATAAGCAGGTTTTAAACCAAAACTCTATAGATATGTTGATCA
CGTGAAGACAATTTTAAGTATCACGTTGTTTAAGGTTTGTTTTAACATAA
AACACTGGGATATTGTACATCTAATACAGAAATGTCTACATCCATATTAA
AAGATTAATGACAGAAAAATTACCATGCTACAAAAGAAAAAGCATACTTT
ATGCATTTTTGTCTGACACCAAATTTTGCTGTTACAGGGTATGTCGGACA
ACCCGGCACCATGTCAATAGGACTGTTTCTAGTCATTTTGCAGTCAAGAA
TACGCCTAACTCTAACCCTAACCTAATTCTAACTCAGGCCTAACCCTAAT
CCTTACTCTAACCATAACTCGAGTCGTCCTGGACCTGGTGCCGAATCGTC
CTGATTGGCTATGTGCCGAATAGGCCGATTCTGACAGTCTATGACAATTA
GCAGTTCAACCAATGATAGCATGGCAAATGGCATTCAACCAATGAGACAG
CGGTTGCATGTCGGTCAATATTTGAATTTTCATGTTTTTAGTTTGCATTT
CTACGTTGTGATGAAGGTAAAATAAATGATAATTTAACGGTTGACAGTGG
CAAACGTGCTAGATGTTGCACATCGGCAACCAAATCTGCAGTGTGTTTTT
TGGCACACAGTTTGACAGATTAGCCGAATAGGCTCGGTGGGCGTCACTCC
ACCGTCCGGAAAGGTAGTGTAAAGTGCCTTTCCCAAGGGCACAACGTCGG
GGCATGGTGAGTATCGAACTCGGGACCTATTGATTCCGAGTTCAACGCTC
TAACCGTTACGCCACGCCGACGTCACTAGCATTGTGATGAAGGTGGACCG
GACTATGAGATCTGTTTATTGACCTGATACCGTCACATTGTCTCAAAGAA
GTTTTAATTGGTATTTCAAACTTAATGTGGTTGGTGCTCCTTCTTTTTCT
GGAATCCGTGAATGAACGAATGAATGAATGAATGAATGAATGAAAACTTT
ATTATCGTGTCTTGCGACATTTTGCGCCCAGCCCATGCGGGCTTTTAAGA
CACCGTATATCTTACATTAAATGCATAAAGAAAAGATCAGGAGTACATTG
ATGTCAAACGTTCTCTTTTCTTACAACCACAGGCGATTTTCCTGTGGGTG
AAGAAGGGCAACCGTGCTGTTCACCTGTACGAACGTCAGGGCTACGTCAT
CACCCATACGTTCGGCGGCTGGTTCAAGCGATGTGCGACGGGCTCCAGAG
TGAGTCTGATTCTCACTGTAGCGTAACATCTTCCATCTTCTTACTTCACT
CTTACGTGTTGTTTTTCTGTTTGGGTGACTGGTTGTCTTTGTCTCTCTCT
CTATCTCTCTCTCTCTGCATTCCTCTCCTTACGATCGGATGTCACCCAGA
CTATCTCTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCA
CTCACTCACTCACTCGCTCGCTCACCCACTCACTCACTCACTCAGTCACT
CACTGCCATGTATCCTCCGTATTATGCTTATTTCTATACATGTGAAGCCA
GTGTCTTCGGTGCCTTGTATGTGCTTATAGATATATCTGTGTGTGTGTGC
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGCTTGTGTGTGTTA
GAGAGTGTGTGTGTGTGTGCGTGCGTGCGAGTGTGTGGTCTATTTTTGTG
TGCGCGTGTGTTTGCATGTGCGATTTGTGTTTGTCCATGTGTGCTATGCT
GTTATTCCACTTTTGAAATGTTCTGCCCAAACTGCAGGACTGGCACAACA
TGGAGAAGCAACTGTAACGCCCCGGAAATGACGTCACAACAACGTCTCAA
GTTTCCATCTTGTCACAGAGATGTGATGACCACAAGGCTGATACTAAAGG
AAGGAAGAAACAGTTCCGTCATGCATGCACGCATATATACCAACATTCCC
TGAGTGACGTGTTCTTTCTACAAATTAACAATCTATACAGCCTTATCTTC
TAAACGTGCTTAGGGCCATGTCACACTTGTGCGTATATTCAAGTGTGCGT
GAGTTGCGCAGTAACATTTTTTTGGTTTAAGTAAGGCGAAAAAGTTGTTT
TCTACTTCGACCCACCGTTGTGCAGCCTAGTCATCGAACCTAAGAAATCA
CTTATTCGGTTGCAAACTTAACCTAAACCAAAAACACGTTAATACGCAAC
TCATGCGGACTTGTGGACAAGTGTGACAGGGGCTTTATGTTTAAGTCCGT
ATGAGTTCCGTATCAACATTTTTTTGGCTTAGGTAAACAAAAGTTTTTTC
ACCCACCGTTTTGCAGCCTGGTTTAATATAGAACCGGAAAATACTTTTTC
GGCCGCAAACTATACCTCGCACAAAAAATGTGCGAAATGCATACGGCCAG
AATTATACGCACAAATATGAACGGGCCCTTTGATAGGCCATGTATTTAGA
TATCAGTCACTTTTCAATGAAGGCTTTCAAGTAGAGATGATAAGTAAAAC
CAGACACTATCATGGTACAAACTGATTCCACTTGTGTTCACCTTTTTGTT
TGCAGTTGAAAAAGTCCCTCGACTTTCAGAATGAATTTGTGAACTTGTTT
TGTGTCAAAATAAACTGAACTATTCTATCAACAGTCTCCCTGGTTAGAAT
TTACCCGGGATCCGGTAACAAATAGGCGCCGTAAGCTAATCGTGAAAACA
CCGAGAGGTACCCCCAGTTATGCTTCGATCCCAATTGCAATCCGGGGCCC
GGCCGGGCTGTTTGCGAAAACGGAAAAAAAAATGCATATCAAGAAAGTAT
ACATTATATGGTTAGGAGTGATTTTTTTCGTTTTGTATCTTTTGTTGTCT
TTTATTTCATACTTTCTGTTCCAACTAGCTGCCCGGCCGGGCCCCGGATC
GGAAATGGGACCAAACCATAACCGGCAGTCCACCGGGACTACAGCCCCTA
CGTACGAGCACGGGTGAAAAGTTGACCGAAGTATTACAGAGGCTCCGAGT
AGCATATCACGATGCCCTTAAAATCTCGTTGTCCCAACCCAGGTATACCA
GCAACAGTCTTTGTTTTGTACAGCTTGGTGTTGACCGGGAGGCGAAAGTT
GACGCATTGTTTCGTCGCCTCTTGGTGTCGGGAACGACGTCATCAAACGT
CTGCTATATTGAGCAGCATTCTCTTCGAATAGGTCCTGGTATTAATACTG
TCACGTTCGCTGTAAGAGGCCGCTTACTTTGAATGTCGCTTTTATGTAGT
CATTGTAAATACCTGTAGTTTTTTTTAGATGTTTGTATGTGTTGATGTAT
GGGTCTGAGGAAAACAATAAATATGTAAAATGAATTCATCCAAAACTCTG
TGAATTGGTATGCTATACATAGTAAGGTGAAGTCTATTCTAAGATGGTTC
AATTGAAGACGGCATCAAGACAAGGTTGTATGCTGATAAGTTAATTGTGT
TGTTTTAGCACAGGCTCTAATGTTGTCTCGTAGGGTGGGAGGGCAGAAAC
TAAGTGCTGGAAAGTTCGACACGAAGGCCTCCTTTCCTGTACTACACCCA
ATCCCATAATAGTCTACCTCATTTCAGTCAGTTAATGTAGGGGCTCTGCC
CCCTCCACTCAAAGAGGAGGAAATCTTAATTATCATGTAATTACAAGAAA
TATTCAAATATTCATAACTTTGATTATAGTTAGACATTTCACTAATTTTA
GGAGCCTCTAAATGTAGAACATGTAACTGCTATGTTTTGCACTTGACGAA
AACTATATATGCATGCTAGATATACATAAGAATCTTGACTATTTTAATTG
GTACCTGTGACTTATTGACAACAATAGATGGGACATTAGAACGTTCTTTT
AAATGAATAAATGAAGCACTTTATTGTAAACCCATGCTTCGAATGGCTAG
GCGCAGGTCGTCTACGTATGAGTTAACAAACGTGTAAAAAACATATATGT
AGAAAAGTAATATGTAAAGGCAAGAAATACACCAGTTAAACCATAGGCGG
TGGGCCACCGAAATTTTGTTGAAAATTTTTTAGTCTAG Coding sequence (CDS) from alignment at Sc0000280:206266..214153- >Blg00027.1 ID=Blg00027.1|Name=Blg00027.1|organism=Branchiostoma lanceolatum|type=CDS|length=678bp|location=Sequence derived from alignment at Sc0000280:206266..214153- (Branchiostoma lanceolatum) ATGGCGGTTGAACCTGTAGTTGCTCAGCCTGGAATGGCAGAACTGCCCTC TGAAACAGCACCAGGAACTGAGCCGGGCAGTCCGCTGCAGGTCAGGAACA TGGAGGCAGAAGACATCGAATTTGTCTCTCGAATGTTGGTGGACGCTTTC AGTGATAAGTTTGAACACGCGGTTGGCAAGAGTCGGATGGAAGGTGCGGT CCAACAGACAGTCGCTTCGCTGGGCAGGTCCCAAGACGTCTGGCACAGAT ATCGCGTCGCCGTGTACGAGGGCAGGCCAGCAGGCGCCATGGCCTTCAAA TTTCATGGAGACAGCGCCATGGGGGATTTCAGCTGCGGGGAGGCGTGCTC ATTTCTTGGATGTGGCACGTGTGGGCTCATCTGCATGGGCGCTGCCTTGG AAAACGACAACATTCCTGTGGGGCAGTGTTACCTGGACCACATCGGCGTG GACGCGAGCTTTCGCGGGAAGGGCATCGGGAAGGTGATGCTGGATAGGGC GGACTATGAGGCCAGGCAACATGGGTGCACAGCGATTTTCCTGTGGGTGA AGAAGGGCAACCGTGCTGTTCACCTGTACGAACGTCAGGGCTACGTCATC ACCCATACGTTCGGCGGCTGGTTCAAGCGATGTGCGACGGGCTCCAGAGA CTGGCACAACATGGAGAAGCAACTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00027.1-exon-Sc0000280-1570713199:213992..214153 | Blg00027.1-exon-Sc0000280-1570713199:213992..214153 | Branchiostoma lanceolatum | exon |
Blg00027.1-exon-Sc0000280-1570713199:212458..212547 | Blg00027.1-exon-Sc0000280-1570713199:212458..212547 | Branchiostoma lanceolatum | exon |
Blg00027.1-exon-Sc0000280-1570713199:211822..211948 | Blg00027.1-exon-Sc0000280-1570713199:211822..211948 | Branchiostoma lanceolatum | exon |
Blg00027.1-exon-Sc0000280-1570713199:211466..211594 | Blg00027.1-exon-Sc0000280-1570713199:211466..211594 | Branchiostoma lanceolatum | exon |
Blg00027.1-exon-Sc0000280-1570713199:211144..211203 | Blg00027.1-exon-Sc0000280-1570713199:211144..211203 | Branchiostoma lanceolatum | exon |
Blg00027.1-exon-Sc0000280-1570713199:210465..210621 | Blg00027.1-exon-Sc0000280-1570713199:210465..210621 | Branchiostoma lanceolatum | exon |
Blg00027.1-exon-Sc0000280-1570713199:209055..209171 | Blg00027.1-exon-Sc0000280-1570713199:209055..209171 | Branchiostoma lanceolatum | exon |
Blg00027.1-exon-Sc0000280-1570713199:206266..208516 | Blg00027.1-exon-Sc0000280-1570713199:206266..208516 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000280 | genome | Sc0000280:206266..214153 - |
Properties
Property Name | Value |
GeneID | Blg00027 |
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