Blg00026.0 (mRNA) - B. lanceolatum

Overview
NameBlg00026.0
Unique NameBlg00026.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000280:111396..117092+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00026.0 ID=Blg00026.0|Name=Blg00026.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5697bp|location=Sequence derived from alignment at Sc0000280:111396..117092+ (Branchiostoma lanceolatum)
ATGGGTAAGGTGATTTTTCTGGTTATCCTCGCGTTTCTGCAACAAGGAGG TGCAGCGAACGTCAAGAACCTCCCTGAGATTGTCCAACATGAGGCGGCAG TAGGAGAGAATGAAGTCGCCGGGCAGATTACAGTGCACTGTCCGGCTCAG CCAGCACCGTCTTGCGCGGCTGTGGACCATCTCCTGCTGTACCTGAGTAC ACAGGACAGCATGGAAGAACAGCTGGAACAGCTGAAGAACAAAACTGACA GCCTGGATGGACAGCTGCAACAACTAGCTCAACAGGAGCTGGCTGAAGTA AGTACTATTAAAGACAAAAATGAACGGTATTGTAACCTTCATTTTTGTAA CGTTTGTGTATCTTTTCCTGTGTACGAGCGAGAGAAGTCATGTTTTACCA TACAAATACAGTTACAAGTGGCACAAAATATGGTTTCAAGACATATCACA CCACTAATGGATTTTCTACAATAAAGTCAAAATCAAAGACGTTGAACCCC TACGCGATATGGTGTACAGCACTTCTTTTATACATGCGTTTGTGGGTCTT AGCAACGCGTTATGTTTAAAAGCCCTGTGGTCAAACATTGACATCAAAAT GTTTATTAATCACCTGTCATTCCCTTCATGCAAATAGAACGTGCCAGAAA GTTTGTTTTCTCCTGTCTGTGGTTCCTGTTTCAACCAAAGTTTATCTTAG GCCACAGCAAGTAAATTTTAGGGATGACATCAGCGCGCATTTATTTTCTC TTGATTTTGACATAGAAAAACAAGATTTTAAGCCTTCGGCAATGATCAAC ATACCGGAAATAGTACAATATGACACAAATTAAACTACTGTCAGTTCTAT CGCAAAAACGTTATAGACGCTATAAAAAGACATTTCACATATAGTGGATA ACTTGAGCTGAGGAAAAGTGAGCAGAGCCAGCATAGCAACATGTAGTCAA CGTCAGTCTGCCTCATGACTCAGGAGACCCCCATGCAAAGTGTACGGGAC CCGGATCTAAATTCATAATTTAATCATCTAAATGTTGACATCAGTGTTGG TTAATGTTTTATTGAATACAGTAATAAAGGACTTGTTACATTACCCTGTT TTATCCTTTCAATTCTTCTTACTTGCTCCATTGTATTTAAGTTTGAAAAT GTAAATGTTTTTTTTTTGCTCGCCTTGTTTGTTTGTTTTTTGTCGCCCGC GCCCACTACATTTGGAGTCTGCACAGGATGCCATCCATAAAATATACTTA ATTGCAGTGGCCTTAGTTGCTTTTATATCAAGAGATAGATATCCTACTAT AGCAACGGAACAGCCATAAAACATGTACCAAGTGAGCTTTGAACAGAATG TTGCTGATGGAAGTCAGGCGCAGGCCTAGGGAAAGAATGTTGTGTTTCTG GTTACCCTACTGGCCCCAGCAAAAACCTGCCGACATTAATAGGCATTAAC AGGCATTTTTCGGTCGACTTCTAGGACGGATTCTGCAACTTTCGATCTGC ATGATATCTGAGAGATGGAGATTTAAAAAAAAATATGTAGAATTGCAAAC AGACTTTTAATGTTCCCACTCTTTGAACAGATTAAGGCTTCGAACAGTTG TACAGTTGTGGAAATTTGTAGTAAAGAGTGTATTTCTTGGTTCATTACTG GTGTACAATGTATGTAAAATTACAATGTAATTTTGAACTCTAAAAGAGAG AGGGGGCAGACATAGAGAGAGTGAGGGAGAGAGTTTTCAGTACCTTAGCC AGAAACACTTTCTTAGGCCTTAGTATACAGATTTAGCTGTTTCATTCAAA TTAAAAAGGAAGTATTTTCATACAGCTCCAGGTTGAAGCTGATCTGAAGG CCACCGTTGAGGCTCTGGAGACGACAGTCAGCAGTCAGAACAACATCATC CAGCAGCAGGCTGCAACTTTACAGCAGTTACAAGGAACTCTGCAGCAACA AGCAAGCAACCTTCATGCTATGGAAACAACCCACCAGCAGCAGGAAGCAA CCCTGCAACATCAGGAAGCAACCCTGCAGCAGCAAGGAGCAACTTTGCAG CAACAGGAAGCAACCCTGCAGCAGCAAGCAGCAACTCTGCAGCAACAGGA AGCAACCCTGCAGCAACAAGGAGCAACCCTGCAACAACAGGGAGCAACCC TGCAGCAACAGGAAGCAACCCTGCAGCAACAAGCAGCAACCTTACAACAA TGTACCACAAATCTGCAGCAGCTGGAAGGTACGTGCATATATCCATATAC GGAGTAGTATGCCTTCATAAGAACTGTCGTAGATCAGCAAAACTTGGATA AAATAGAATGAAAGTGTCATCAGAGAGTTACCCTTGTAAATGTAGTGAAA GGGGTTTCTTTTACACTTTGTTACCTGTAATACGTATATTGACTCACCTC TATGTCCTGTCCACAGACAAGATTACCGGCCCTCGGACCTGCAAGGAACT TCTCAACAGCGGCCGCAACACGAGTGGAGTCTACACCATCTACCCAACTG GAGAAGTCAAAAGCCCCATCGATGTCTACTGTGACATGGACACTGACGGG GGAGGATGGACGGTACTTACAATACTGATAACTTCAGAAAGACACTCAGG ACCTGAACATTGACAATGTCTAACATCATCTTGAAATACACAATGTCAAT AAAAATTACACAATGCAGAAAGTCTGTAAATCATCAACAGCTTTGAAAAG CTAAAAAGAATTTCAGATTTTGAACATTGACTATCTCAATCACTATAACC CATATAACCGACAGGAAGACGATACAGTATGGCTGGAATAATGGTCTTGC AATCAGTAAAAGGTTAAAAGGGCTAAAAAGAACGAACAGTAGGGTTTCCA AAGACTGCATGTACTTCCGAAATGGAAGATGATTTCCAAACGAAAGAAAG TCAACAAATCCATACCTGCACATAACAGAGATAAAACCAATTCGAAAAGT GTAACCCTTATCATACGAGTTTCAAATTGTCTAATTGACGACACAATAAT GTTGCTAAAAAAAGGAAAAATTCATTGACACATGTTTGCCTTTTAGGTGT TCCAGAGGCGAAAAGATGGCTCGGTAGATTTCTTCCGCGACTGGCAGAAC TACAAGACAGGCTTTGGGGACTTAGGGGGGGAATTCTGGCTTGGTAGGTG ACAATTTCGTACATTTTGCTTATCTGTTTTCAACAAGACTTTCTTCAGAA ACCTATAAGTTACTAACATCATCGAACTGCCTTTCATCAGGCAATGACAA CCTGCACCACCTGACGGCACAGGGAGGGTACGAACTGAGGGTGGACCTGG CGGACTTCGAGGGAAACTCGGCCTACGCCAAGTACAGTAACTTCAGTGTG GAGGATGAAGGGCATAAGTACAAGCTGACTTTAGAGGGATACTCAGGAAA TGCAGGTATATCCAACCGCTTAAGTTTTTACTACACCATGCCAACATCTG CAATATGGCTGAGAATAATGTCAAAATCATCTAATAATGTCATCATCTAA GCAACTGTATTCAAATGACTATATGCTATTTTGAGCATTTTGTGTACTTG AGCTTACGTTTCTAAACCAATCTTGAAAAATATCATTATCTCTTTTCATA CACTAGAATGTGTATACTGTGATCATGAAAAGAGTAAATAACAACTTAAG CAAAGCATGAGTCGTCCTGTTTTAGTAGCTGTCTTGATAAGGTACATTTC CTTTTAGGAGACGCCATGGCTGTTCATTCGTCAATGTTCTTCTCAACCAA GGATAAGAGAAATGATATTCACGAGACTATCAACTGTGCCCAGACATTTA AGGGAGGCTGGTGGTACTCCTGGTGTCACCATGCAAACCTGAATGGCCTG TACCATAGTGGAGTTCATCAGTCCTACGCGGATGGGGTTAACTGGTACCA ATGGAAGGGTCGCAACTATTCTCTCAAACACACTGAGATGAAGATCAGGC CTCGCTAGATTCACCCTTTATGTAGGAAGGCTAATGGTCAAACTGTAATG TTGGCATTGAACCTAGACATGTTAGTTGCCAGTCTGTCTGAGGCTGCCAT TGCATTATCATCATCTTGGCGTGAGAATGTCACGGATGAACATAATTCTC CTCCTCCAGTCCTCTCTGTCCTTCATTGCTCTTGGCCTTGGTGTGCATCC TCACAGAGNGATTACCGGCCCTCGGACCTGCAAGGAACTTCTCAACAGCG GCCGCAACACGAGTGGAGTCTACACCATCTACCCAACTGGAGAAGTCAAA AGCCCCATCGATGTCTACTGTGACATGGACACTGACGGGGGAGGATGGAC GGTACTTACAATACTGATAACTTCAGAAAGACACTCAGGACCTGAACATT GACAATGTCTAACATCATCTTGAAATACACAATGTCAATAAAAATTACAC AATGCAGAAAGTCTGTAAATCATCAACAGCTTTGAAAAGCTAAAAAGAAT TTCAGATTTTGAACATTGACTATCTCAATCACTATAACCCATATAACCGA CAGGAAGACGATACAGTATGGCTGGAATAATGGTCTTGCAATCAGTAAAA GGTTAAAAGGGCTAAAAAGAACGAACAGTAGGGTTTCCAAAGACTGCATG TACTTCCGAAATGGAAGATGATTTCCAAACGAAAGAAAGTCAACAAATCC ATACCTGCACATAACAGAGATAAAACCAATTCGAAAAGTGTAACCCTTAT CATACGAGTTTCAAATTGTCTAATTGACGACACAATAATGTTGCTAAAAA AAGGAAAAATTCATTGACACATGTTTGCCTTTTAGGTGTTCCAGAGGCGA AAAGATGGCTCGGTAGATTTCTTCCGCGACTGGCAGAACTACAAGACAGG CTTTGGGGACTTAGGGGGGGAATTCTGGCTTGGTAGGTGACAATTTCGTA CATTTTGCTTATCTGTTTTCAACAAGACTTTCTTCAGAAACCTATAAGTT ACTAACATCATCGAACTGCCTTTCATCAGGCAATGACAACCTGCACCACC TGACGGCACAGGGAGGGTACGAACTGAGGGTGGACCTGGCGGACTTCGAG GGAAACTCGGCCTACGCCAAGTACAGTAACTTCAGTGTGGAGGATGAAGG GCATAAGTACAAGCTGACTTTAGAGGGATACTCAGGAAATGCAGGTATAT CCAACCGCTTAAGTTTTTACTACACCATGCCAACATCTGCAATATGGCTG AGAATAATGTCAAAATCATCTAATAATGTCATCATCTAAGCAACTGTATT CAAATGACTATATGCTATTTTGAGCATTTTGTGTACTTGAGCTTACGTTT CTAAACCAATCTTGAAAAATATCATTATCTCTTTTCATACACTAGAATGT GTATACTGTGATCATGAAAAGAGTAAATAACAACTTAAGCAAAGCATGAG TCGTCCTGTTTTAGTAGCTGTCTTGATAAGGTACATTTCCTTTTAGGAGA CGCCATGGCTGTTCATTCGTCAATGTTCTTCTCAACCAAGGATAAGAGAA ATGATATTCACGAGACTATCAACTGTGCCCAGACATTTAAGGGAGGCTGG TGGTACTCCTGGTGTCACCATGCAAACCTGAATGGCCTGTACCATAGTGG AGTTCATCAGTCCTACGCGGATGGGGTTAACTGGTACCAATGGAAGGGTC GCAACTATTCTCTCAAACACACTGAGATGAAGATCAGGCCTCGCTAG

Coding sequence (CDS) from alignment at Sc0000280:111396..117092+

>Blg00026.0 ID=Blg00026.0|Name=Blg00026.0|organism=Branchiostoma lanceolatum|type=CDS|length=1359bp|location=Sequence derived from alignment at Sc0000280:111396..117092+ (Branchiostoma lanceolatum)
ATGGGTAAGGTGATTTTTCTGGTTATCCTCGCGTTTCTGCAACAAGGAGG
TGCAGCGAACGTCAAGAACCTCCCTGAGATTGTCCAACATGAGGCGGCAG
TAGGAGAGAATGAAGTCGCCGGGCAGATTACAGTGCACTGTCCGGCTCAG
CCAGCACCGTCTTGCGCGGCTGTGGACCATCTCCTGCTGTACCTGAGTAC
ACAGGACAGCATGGAAGAACAGCTGGAACAGCTGAAGAACAAAACTGACA
GCCTGGATGGACAGCTGCAACAACTAGCTCAACAGGAGCTGGCTGAACTC
CAGGTTGAAGCTGATCTGAAGGCCACCGTTGAGGCTCTGGAGACGACAGT
CAGCAGTCAGAACAACATCATCCAGCAGCAGGCTGCAACTTTACAGCAGT
TACAAGGAACTCTGCAGCAACAAGCAAGCAACCTTCATGCTATGGAAACA
ACCCACCAGCAGCAGGAAGCAACCCTGCAACATCAGGAAGCAACCCTGCA
GCAGCAAGGAGCAACTTTGCAGCAACAGGAAGCAACCCTGCAGCAGCAAG
CAGCAACTCTGCAGCAACAGGAAGCAACCCTGCAGCAACAAGGAGCAACC
CTGCAACAACAGGGAGCAACCCTGCAGCAACAGGAAGCAACCCTGCAGCA
ACAAGCAGCAACCTTACAACAATGTACCACAAATCTGCAGCAGCTGGAAG
ACAAGATTACCGGCCCTCGGACCTGCAAGGAACTTCTCAACAGCGGCCGC
AACACGAGTGGAGTCTACACCATCTACCCAACTGGAGAAGTCAAAAGCCC
CATCGATGTCTACTGTGACATGGACACTGACGGGGGAGGATGGACGGTGT
TCCAGAGGCGAAAAGATGGCTCGGTAGATTTCTTCCGCGACTGGCAGAAC
TACAAGACAGGCTTTGGGGACTTAGGGGGGGAATTCTGGCTTGGCAATGA
CAACCTGCACCACCTGACGGCACAGGGAGGGTACGAACTGAGGGTGGACC
TGGCGGACTTCGAGGGAAACTCGGCCTACGCCAAGTACAGTAACTTCAGT
GTGGAGGATGAAGGGCATAAGTACAAGCTGACTTTAGAGGGATACTCAGG
AAATGCAGGAGACGCCATGGCTGTTCATTCGTCAATGTTCTTCTCAACCA
AGGATAAGAGAAATGATATTCACGAGACTATCAACTGTGCCCAGACATTT
AAGGGAGGCTGGTGGTACTCCTGGTGTCACCATGCAAACCTGAATGGCCT
GTACCATAGTGGAGTTCATCAGTCCTACGCGGATGGGGTTAACTGGTACC
AATGGAAGGGTCGCAACTATTCTCTCAAACACACTGAGATGAAGATCAGG
CCTCGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00026.0Blg00026.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00026.0-exon-Sc0000280-1570713199:111396..111692Blg00026.0-exon-Sc0000280-1570713199:111396..111692Branchiostoma lanceolatumexon
Blg00026.0-exon-Sc0000280-1570713199:113221..113623Blg00026.0-exon-Sc0000280-1570713199:113221..113623Branchiostoma lanceolatumexon
Blg00026.0-exon-Sc0000280-1570713199:113812..113957Blg00026.0-exon-Sc0000280-1570713199:113812..113957Branchiostoma lanceolatumexon
Blg00026.0-exon-Sc0000280-1570713199:114442..114538Blg00026.0-exon-Sc0000280-1570713199:114442..114538Branchiostoma lanceolatumexon
Blg00026.0-exon-Sc0000280-1570713199:116375..116539Blg00026.0-exon-Sc0000280-1570713199:116375..116539Branchiostoma lanceolatumexon
Blg00026.0-exon-Sc0000280-1570713199:116842..117092Blg00026.0-exon-Sc0000280-1570713199:116842..117092Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000280genomeSc0000280:111396..117092 +
Properties
Property NameValue
GeneIDBlg00026