Blg00023.1 (mRNA) - B. lanceolatum

Overview
NameBlg00023.1
Unique NameBlg00023.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000280:73766..77437-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00023.1 ID=Blg00023.1|Name=Blg00023.1|organism=Branchiostoma lanceolatum|type=mRNA|length=3672bp|location=Sequence derived from alignment at Sc0000280:73766..77437- (Branchiostoma lanceolatum)
AAATTTTCATAGTAGCGAGCTGCTGTTTTGGGGTACAAGTCGCGAAAAAA GCGTACAAAATCCGTAGTTAATCGACCTTTTGAAGGCAAGACATATCCGG GCTTTTTTCGATGGTACGGACGGCATATGCATTGTACTACAGAAACGGTA ACACAGACAACTTTCCGTCAGTAAGATATACATAGTCCTGTAGACCTCAA TCATTTTGTCTGTCAACTTCCTCATCGTCTTTGAGAGTGTTCTGGACTTA TAGTGAACATTTGAAGTTAAGGAGGTAAGCCCAGAAGTCCCGATGTTAAT GGACGTATTATATGCTAAAGTAAGTATATGCTAAAAAGGATAGATCATTT TGCAGCCAGCATCTGTATAGTAACTAATCAGAACCGTTGACGATACATGA CGCTTCATGTTTGTTCCCTGTTTGATGAATATCACAGGATTTAATACTTT GAAAGACAGTACAGCCCAAAACTCCCTTAACTTTGCGTGGCGTTTAATAG TAACTAATATTATTAATCTGTTCCTTTTTTGTAATTGTGTGAAGATAACA TATCTAGCAAAATGAATCTTAACACTTCTTTTTTTCAACTAACTGCAACT GAATGAGAGCGTCAAATAATTGGTGTGTTCTGCTTAATTTTTAGCCTCAA GGAAAATACAAGGTCTTCAGCAAAGAAAGAAGAACAGAGGCGGAAAATGA CACAATTCCTCAATTCAACGTTTGATCGGTGAAAGAGACCTTAAGCTTGC CACCAAACAAAGTGAAAAAGGTTGAATAGTCGAGTAATTACGTAGGCAAT TTTTCCGAGGACGTCTCAAGTGAATATGGCACCCTGTACCAGTTGGTATT TGTTGACATTCCATTTGATTCTGTCTGTTTTTCAAACTCATCCAAGCTTT TCCGTTTTTGCTGAACAGAATGAAAATATTACAATACCTGAGGATATATC AGTTGGCAGCACAGTGGTTTATTTGCGACATATTCTAGACGCCAATTTTG CTGTTGCAGAAGTCGGAGATGAAACTTTTTGGTCAGTAAACATCACTAGA AGGGACGACTTCGAACGGTTTGAGGTTTGTCCTGAGAACTTGACCGTAAT TTTAGCGGCGCCGTTGGACTATGAGTTGAAGCCGCGGTATAACATTTCGA TGGTGCTGACAGATACCGGGGACGACAGAATTTTGCACGTACGTCTCGTC GTGGTAGTCATGGACGTGTCAGGATACCCACCGCTGTACAATAAACGTTG TGAAACGCCGGTACTATCCGACAGGGGGCGCGGTGAGGACTATCGTATAC TGAGCGGTGACAAATACACTATCACAGCAAACGGCGAACCTGTGTTAGCT CACGACGACATTTTTCGTAATACAGGATTTGGGGAAGGCCAGTTGGCTCG TTTTTCCATAAAAGACGGCTGCTCCTGGCGATTTTTCTTTGGTGCGCCTG AATTTATAAATGAGGGAGCTATCTTAGCGACAGTATTAAAAGGGCGCGGT CAAAATGGTCGAATCGAGTTTCAATGTCACGACAAAGAGTGGAAAAAGAA AGGTACGATCACAGTCTTGGATCTTTCCCTTGACAATGAGTTGCCACAGT GGATACATATGGACCACTTGAACGATGAACAAAGTGTCCGTGTGATGATC ATTATAGAGTTCAACGATCTGTGGTGCAGTACATCCTGCTGGTTGCGGTG TGGCGCTAATGTCACGTTGGATGGAACAATGGTACTCGTGGAGTACACAT TTCAGTACAACATTACAGGATGTCCCAAGGACAGGTACGGAGTGGAGTGT GACAAGAAGTGTATTTGTAAGAACGGGGCTCGTTGCCATGGCTTCAGCGG TGCCTGTGAATGCCTCCCGGGTTGGAGAGGGAGGGCCTGCGATGTTCCCT GGCCTGAGGTCGTCATCATAGCGACACCTGGCGACTCAGTCATTACCTAC ATCGGCACCAATCTCTCCCTGACCTGCGTGGCCCCCCACATCCAAGTAGC AAATATGACTTGGTTTTATCAATCAGAAATCGAATATATCGACTCAAACA TAACACAAGGAGTAACACTGAACAATTCCATAAACTTTCAACCAGTAACA GAATCATCCAATGGCAGATATACTTGTATAGTAAAGGATATAGATGGTAA AGTTTTCAGTGCAACGTTTGTGCTAAACGCTACAGAATGCCTCCCCAACT ATTATGGGGAAGTTTGCAGTCAAGTGTGCAATTGTCAATATGGTGGGACG TGTGACAGGTTGAAGGGTTGTCTGTGTCCTCCGGGCCGCCATGGAGACAG GTGTGAGCACACATGCGCACCTGGCACATTCGGGCTGAACTGCAGCATGA CGTGTTACTGTCAGAACGATACCTCGTGTGATCAAGTAAATGGTACCTGT ATTTGTGCAGCCGGACAGTCTGGCGAATTTTGCCAGAGCAGCTCTGAAAA TAAGAGCAGAACCTTTGTTATAGTACTGGCCACCGTTGTTCCTATCATTA TAATAATCGGTTGCATCGTCGTTACTATTGTAACTCTTAAAAGACAACGG CGGTCGCGAGGTCAACGGAATCCAGAAATAGAAATGACAAACGTGGACAG AGTAATTATGGCTCTTAGAGACATCCTTGCGCCGTGGGAATTGGACAAAG AGGACCTTCATCTCGAACACATGATCGGTGAGGGAGAGTTCGGCCATGTC GTGCGAGGGAGACTGCGCATACCCGAGGGCTACCAGGTCTTGGTGGCCGC TAAGAGTATCAGACCTGACCGCATGACAGCGTCCGTTGTCCGTGACTTCG AACGGGAAATGAGCATACTTGCCAGGATCCACGAGGACCAAGAGGGACAT CCCAATATAGCAAAGTTTTATGGCGCTGTGACGAAGTCCGAGCCTCAGTA CATCGTGGTAGAGTACGCGAGCAATGAGGACCTGCGACGATACCTGTGGA GTTTGAGAGAAGACTTTAAGATCACGAGACATAAGAGGGTGTTGGAACGA CTTGGCTTTGCTGCTGACGTGGCCAGTGGTTTATCGGAGCTGGCACGTCT GAAGATCGTGCACCGGGACATCGCAGCTCGCAACGTCGTCATCAGCGACA CGATGGTGGCCAAGATCGCGGATTTCGGGTTGTCGCGTGACGTTTACGTG TCGTCGGCATACGAACGCACAAACCAGAGCGGCCAGGAGGTACTGTTGCC GCTGAAGTGGATGGCCGTGGAGTCGTTACGGGACGGGGTGTACACGTGTG AGAGTGACGTGTGGTCGTACGGCGTGCTGCTGTGGGAGATCGCCAGCTTT GGGGAGGAGCCGCGCTATCCGAGTGGTCCGATGCACCCCGACGTGTGCAC AATGTTGGAGCTGCTGAGGAAGGGGGTGCGTCTGCAGCAGCCACACAACT GTCCGCGACACTTGTACCGCATCATCAGGTCCTGCTGGATAGTCGACCCG TCCAGGCGACCGACTTCTGAAGAACTGGTGCGAAAGATCAAGCTTCTGAT GCCACCGAGGCATGCTGATCATCTATTTAATCACTCACCTACTTCGCCGC CGCTGTCAGCCCGCCACCACGACTTACCGCCACCGCTGCCGGCTCGCCAC CGCGACTTACCGTCGCCTCGACTCACCGACACCGCCGCCGATGCCGCCGC CACTTCCGCCCCGCCGCAGTGA

Coding sequence (CDS) from alignment at Sc0000280:73766..77437-

>Blg00023.1 ID=Blg00023.1|Name=Blg00023.1|organism=Branchiostoma lanceolatum|type=CDS|length=2847bp|location=Sequence derived from alignment at Sc0000280:73766..77437- (Branchiostoma lanceolatum)
ATGGCACCCTGTACCAGTTGGTATTTGTTGACATTCCATTTGATTCTGTC
TGTTTTTCAAACTCATCCAAGCTTTTCCGTTTTTGCTGAACAGAATGAAA
ATATTACAATACCTGAGGATATATCAGTTGGCAGCACAGTGGTTTATTTG
CGACATATTCTAGACGCCAATTTTGCTGTTGCAGAAGTCGGAGATGAAAC
TTTTTGGTCAGTAAACATCACTAGAAGGGACGACTTCGAACGGTTTGAGG
TTTGTCCTGAGAACTTGACCGTAATTTTAGCGGCGCCGTTGGACTATGAG
TTGAAGCCGCGGTATAACATTTCGATGGTGCTGACAGATACCGGGGACGA
CAGAATTTTGCACGTACGTCTCGTCGTGGTAGTCATGGACGTGTCAGGAT
ACCCACCGCTGTACAATAAACGTTGTGAAACGCCGGTACTATCCGACAGG
GGGCGCGGTGAGGACTATCGTATACTGAGCGGTGACAAATACACTATCAC
AGCAAACGGCGAACCTGTGTTAGCTCACGACGACATTTTTCGTAATACAG
GATTTGGGGAAGGCCAGTTGGCTCGTTTTTCCATAAAAGACGGCTGCTCC
TGGCGATTTTTCTTTGGTGCGCCTGAATTTATAAATGAGGGAGCTATCTT
AGCGACAGTATTAAAAGGGCGCGGTCAAAATGGTCGAATCGAGTTTCAAT
GTCACGACAAAGAGTGGAAAAAGAAAGGTACGATCACAGTCTTGGATCTT
TCCCTTGACAATGAGTTGCCACAGTGGATACATATGGACCACTTGAACGA
TGAACAAAGTGTCCGTGTGATGATCATTATAGAGTTCAACGATCTGTGGT
GCAGTACATCCTGCTGGTTGCGGTGTGGCGCTAATGTCACGTTGGATGGA
ACAATGGTACTCGTGGAGTACACATTTCAGTACAACATTACAGGATGTCC
CAAGGACAGGTACGGAGTGGAGTGTGACAAGAAGTGTATTTGTAAGAACG
GGGCTCGTTGCCATGGCTTCAGCGGTGCCTGTGAATGCCTCCCGGGTTGG
AGAGGGAGGGCCTGCGATGTTCCCTGGCCTGAGGTCGTCATCATAGCGAC
ACCTGGCGACTCAGTCATTACCTACATCGGCACCAATCTCTCCCTGACCT
GCGTGGCCCCCCACATCCAAGTAGCAAATATGACTTGGTTTTATCAATCA
GAAATCGAATATATCGACTCAAACATAACACAAGGAGTAACACTGAACAA
TTCCATAAACTTTCAACCAGTAACAGAATCATCCAATGGCAGATATACTT
GTATAGTAAAGGATATAGATGGTAAAGTTTTCAGTGCAACGTTTGTGCTA
AACGCTACAGAATGCCTCCCCAACTATTATGGGGAAGTTTGCAGTCAAGT
GTGCAATTGTCAATATGGTGGGACGTGTGACAGGTTGAAGGGTTGTCTGT
GTCCTCCGGGCCGCCATGGAGACAGGTGTGAGCACACATGCGCACCTGGC
ACATTCGGGCTGAACTGCAGCATGACGTGTTACTGTCAGAACGATACCTC
GTGTGATCAAGTAAATGGTACCTGTATTTGTGCAGCCGGACAGTCTGGCG
AATTTTGCCAGAGCAGCTCTGAAAATAAGAGCAGAACCTTTGTTATAGTA
CTGGCCACCGTTGTTCCTATCATTATAATAATCGGTTGCATCGTCGTTAC
TATTGTAACTCTTAAAAGACAACGGCGGTCGCGAGGTCAACGGAATCCAG
AAATAGAAATGACAAACGTGGACAGAGTAATTATGGCTCTTAGAGACATC
CTTGCGCCGTGGGAATTGGACAAAGAGGACCTTCATCTCGAACACATGAT
CGGTGAGGGAGAGTTCGGCCATGTCGTGCGAGGGAGACTGCGCATACCCG
AGGGCTACCAGGTCTTGGTGGCCGCTAAGAGTATCAGACCTGACCGCATG
ACAGCGTCCGTTGTCCGTGACTTCGAACGGGAAATGAGCATACTTGCCAG
GATCCACGAGGACCAAGAGGGACATCCCAATATAGCAAAGTTTTATGGCG
CTGTGACGAAGTCCGAGCCTCAGTACATCGTGGTAGAGTACGCGAGCAAT
GAGGACCTGCGACGATACCTGTGGAGTTTGAGAGAAGACTTTAAGATCAC
GAGACATAAGAGGGTGTTGGAACGACTTGGCTTTGCTGCTGACGTGGCCA
GTGGTTTATCGGAGCTGGCACGTCTGAAGATCGTGCACCGGGACATCGCA
GCTCGCAACGTCGTCATCAGCGACACGATGGTGGCCAAGATCGCGGATTT
CGGGTTGTCGCGTGACGTTTACGTGTCGTCGGCATACGAACGCACAAACC
AGAGCGGCCAGGAGGTACTGTTGCCGCTGAAGTGGATGGCCGTGGAGTCG
TTACGGGACGGGGTGTACACGTGTGAGAGTGACGTGTGGTCGTACGGCGT
GCTGCTGTGGGAGATCGCCAGCTTTGGGGAGGAGCCGCGCTATCCGAGTG
GTCCGATGCACCCCGACGTGTGCACAATGTTGGAGCTGCTGAGGAAGGGG
GTGCGTCTGCAGCAGCCACACAACTGTCCGCGACACTTGTACCGCATCAT
CAGGTCCTGCTGGATAGTCGACCCGTCCAGGCGACCGACTTCTGAAGAAC
TGGTGCGAAAGATCAAGCTTCTGATGCCACCGAGGCATGCTGATCATCTA
TTTAATCACTCACCTACTTCGCCGCCGCTGTCAGCCCGCCACCACGACTT
ACCGCCACCGCTGCCGGCTCGCCACCGCGACTTACCGTCGCCTCGACTCA
CCGACACCGCCGCCGATGCCGCCGCCACTTCCGCCCCGCCGCAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00023.1-exon-Sc0000280-1570713199:77291..77437Blg00023.1-exon-Sc0000280-1570713199:77291..77437Branchiostoma lanceolatumexon
Blg00023.1-exon-Sc0000280-1570713199:73766..76793Blg00023.1-exon-Sc0000280-1570713199:73766..76793Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00023.1Blg00023.1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000280genomeSc0000280:73766..77437 -
Properties
Property NameValue
GeneIDBlg00023