Blg00022.0 (mRNA) - B. lanceolatum

Overview
NameBlg00022.0
Unique NameBlg00022.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000280:143462..145996+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00022.0 ID=Blg00022.0|Name=Blg00022.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2535bp|location=Sequence derived from alignment at Sc0000280:143462..145996+ (Branchiostoma lanceolatum)
ATGCGACCACTCAAAGACACAAAGGAGCGCGGGTTTAATCAACACTCTTC ACGGAACCATGAGGCGCACAAGGTCGCAGGCCACTGTTACTGAGTATTTC GCCTATAGGGATTTACATAGTTAAGGACCCCAAAGTGAGAAGCTTCGACG CTTCAAAATTTATTGTAGGGTCCACAATTAGGGTGCACGATTTTAATGTT TTTGACTTCAGGGTTCAATCTACAAAATATGTGAAAATGAGCATAAATTT GCCGGCTCATTCTCTTTTAAAAGCCACTTTGATTTCACCCCCAGCGGAGG TCATCATACTGCAGTCGACTCACAGTAGTCGGGCGGTAATATTCAGGCGC GAATCTAAGCTAATCGAACGAACATCGCAATCCAACTCATACACACTCAA AACTGATGTATTCCTCTACCATTCACCACATGTTTGGTCTGGTTTATTGT AGATTAGATGTGTCTATCCCAAACATTACATTGACTCTGTCCACTGTTAC TTGCCGTTTCTCAGGGGCAGACTGCGCTGAATATAAAGCCTTTGGAGATA CGACCAGTGGAGTCTACAGACTTGGCGGCTCCCTGGCCGGTGTACAGGCC TACTGTGACATGGATACAGCAGGTAAAAATTGTTGGAACACACATAGGGA TCTGACATATACACAGGTGTGTTTTATAAAAGGACGCAGCTGCCTATTAA GGAGCATTTCTCCAGCCAGTTTCTGTTCTGATACAAAACTAGGCAATGGT GTGGTGTTATCTACACTCTTTTACAGTCTGTAACGTAATTAATTGTGTTT TGTCCTTTTGACACCCCGCATGTACAGGAGGCGGCTGGACTGTGATCCAG CGGCGGCAGGACGGGTCGGTTCCCTTCAACCGGAACTGGAAGGAGTACAA ACAGGGCTTTGGGAACAAGAACGGGGAGTACTGGCTTGGGAACGACAACA TCCACCTCCTGATCAGTCAGAAGAACTACACCCTGCGAGTCGACTTAAAG GACTTGGACAAACAGACACGCTTCGCGGAATACAGCACGTTTAGGTCGGT ACTACTCCTTCTAGTGAGAATTCTGGGCAGACAGCACCATTTACTGTACT AGTTAGGAAGTCCCATGGAAATATAACATAGTGCAAACGAAGGCCTGAGA AAGTACATGACATGTGTACTCAGTTACATTTTAATCTTCCTGATGGCAAG CATGTAATAAATAAGATAACCTCGAATGCTGGGAAATCCATGCGCTCCGT CAAGGGTCGACCAAACAACTCACCTGTCTCCTTACACCATCTAAAACTTG TGAACAGAACTAATTTTAATCAACCTGGGAAAGTTTTACCCTACCTGTTC CTTCTCGCCTAGAATTGTATCACCATTCATCCTGATGTTCTTGCACATTG TAATGAACATTTCGCAATATTTTTGGCTCCTTTTCTTGAGCCAAATGGCT TATGGGTATTTATGAATATGACAGTGTGCCAGTACATTCCATGCACGAGA AGCGATTCCATGGTGACATTAGTACTATCATGCCTTTCTTCACCATTTCC GACATACTGTTGCACATTATCAGCCACATATTTCTTGTTTGTCTGTATTT TGACCTGAAAGTTAAGTTACATACCCAAGCACGTACAGAACAGCCGCATA GTGTAGCCTCAGATCACTTATGTTCTGCCTCTCTAACTGAACGCCTGAGA AAAATAAATTAAATTCATTCGTTTGTTGCTTGGCTTAGGCTCAAAGTCCC ATATTCAGACAGTGCAAACACAGGTACACATCTAAAAACGAACGAAAATG TCTTCAGCTATGATAAATTAGTATGTACGAACAGCACCACTAAACTGTCT CTAACCGAGGACGGACATTGCAAGCTGACTGTAGTGTCGTCAGAACAGAC ATTATGATTTATAACTGCTTACCTTTATTTCATCCAATTTCCCCCTCAGA CAAATAGCTAATCACCATTTACCCGTTAACATCATTGTCTAATGAAGAAG TTCACAAATCATCTTTTAACATCAGCAGCCACAATCTCCTCTACCCCCTC AGCTACCATTACTGGCTCTCCCCTTTTCTTGTCTCCCCACTGTTTTATTT GAAAAAGCAATTACTCAGGCAAGAATTACGAGAAATTCACAACGATTGCA CGTGTGATTAATGTCCACATCCAGGGTGTCCGGTGAGTCGGACGGGTACC GCCTCACCGTCTCCGGGTACACAGGCGACGCGGGAGACGACATGACTCTA CAAGTCGCGGGGGACTCCATGACTGGTCGTTACTCCAGCAACGGGCAGAA GTTCTCCACCATGGACAGGGACAATGATGCCTGTCCCTGCCATTGCTCTC AGCTGAACGGACAGGGCGGCTGGTGGTTTGGCTTCGGCTGCGGCTTCTCC TTCCTCAACGGCCAGTACCTGGGCAACTGTGGGAACATACGATGTCCAAG GGGACAAGGTGTGGTGTGGTTCCACTGGAGAGGCTCGAGTTACTCCCTGA AGTCTGTGTCTATGAAAATCAGGCCATATCCATAA

Coding sequence (CDS) from alignment at Sc0000280:143462..145996+

>Blg00022.0 ID=Blg00022.0|Name=Blg00022.0|organism=Branchiostoma lanceolatum|type=CDS|length=771bp|location=Sequence derived from alignment at Sc0000280:143462..145996+ (Branchiostoma lanceolatum)
ATGCGACCACTCAAAGACACAAAGGAGCGCGGGTTTAATCAACACTCTTC
ACGGAACCATGAGGCGCACAAGGTCGCAGGCCACTGGGCAGACTGCGCTG
AATATAAAGCCTTTGGAGATACGACCAGTGGAGTCTACAGACTTGGCGGC
TCCCTGGCCGGTGTACAGGCCTACTGTGACATGGATACAGCAGGAGGCGG
CTGGACTGTGATCCAGCGGCGGCAGGACGGGTCGGTTCCCTTCAACCGGA
ACTGGAAGGAGTACAAACAGGGCTTTGGGAACAAGAACGGGGAGTACTGG
CTTGGGAACGACAACATCCACCTCCTGATCAGTCAGAAGAACTACACCCT
GCGAGTCGACTTAAAGGACTTGGACAAACAGACACGCTTCGCGGAATACA
GCACGTTTAGGGTGTCCGGTGAGTCGGACGGGTACCGCCTCACCGTCTCC
GGGTACACAGGCGACGCGGGAGACGACATGACTCTACAAGTCGCGGGGGA
CTCCATGACTGGTCGTTACTCCAGCAACGGGCAGAAGTTCTCCACCATGG
ACAGGGACAATGATGCCTGTCCCTGCCATTGCTCTCAGCTGAACGGACAG
GGCGGCTGGTGGTTTGGCTTCGGCTGCGGCTTCTCCTTCCTCAACGGCCA
GTACCTGGGCAACTGTGGGAACATACGATGTCCAAGGGGACAAGGTGTGG
TGTGGTTCCACTGGAGAGGCTCGAGTTACTCCCTGAAGTCTGTGTCTATG
AAAATCAGGCCATATCCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00022.0Blg00022.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00022.0-exon-Sc0000280-1570713199:143462..143546Blg00022.0-exon-Sc0000280-1570713199:143462..143546Branchiostoma lanceolatumexon
Blg00022.0-exon-Sc0000280-1570713199:143976..144083Blg00022.0-exon-Sc0000280-1570713199:143976..144083Branchiostoma lanceolatumexon
Blg00022.0-exon-Sc0000280-1570713199:144289..144505Blg00022.0-exon-Sc0000280-1570713199:144289..144505Branchiostoma lanceolatumexon
Blg00022.0-exon-Sc0000280-1570713199:145636..145996Blg00022.0-exon-Sc0000280-1570713199:145636..145996Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000280genomeSc0000280:143462..145996 +
Properties
Property NameValue
GeneIDBlg00022