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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000280:65505..72329+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00017.0 ID=Blg00017.0|Name=Blg00017.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6825bp|location=Sequence derived from alignment at Sc0000280:65505..72329+ (Branchiostoma lanceolatum) ATGGCTGAGGTAGGTAGGGCTAAGGTGACCTAAGACGTTCTTGAGCTAAG
ATACACAGGCAATTTGTTAATCTGATCGAATGCTATGTTGCGTTTGTCAA
TGTTTACACGACGTGACGCCATGTTGGGGAGGGAGGCAGTACTTTCAGGC
AGGACAGCACTGTCGATCTAGGATCATCTAGATCTTATTGGAATGTTTAG
TATTTCAGGGGGCGGTCCTCGAGGGGGGGAGGGGGTATGACAGAAATAAG
ATTGACTGGGGGTTCATACAAAAAATTGGGCGGGGTGTCTCAGGACCTTG
AGAAATTTGAAAATACATATGGGGAATGTTCATCAATCTTATCGGGTGGT
CAGCAGGAATGAAAATTTATTAAGGTTTCATATTGTGTCGTGTTGACGTT
TTTCAATCAGAATGTGAGTCGATGTACGTAATGTTCTTGAATAGTCCAGA
GCGAGTTCCCTCCTGGTTGTTCTTTTAGGACAAAAATGAGCATTATTCAG
CATGTATAAAATACACAGTTTATTGCACTAGTACATGGCCGATGGCTAAT
TGCAAATACATGCAACATATATATATAAGAATAATGGATAAAATGATTTG
CTACTTCCGATGTCATACTATATCATGAAATATGACCTTAGCATAACTTG
ACTTGTGTTATGTGACAGTTTCTATTTGCCTGTAGTCTTGGTGGATCGCG
TTCCGTAGTCCGTTGGAGATCTATGAGAAGCATGGCAACTTTCTGGTGGC
TGAAATCGCCCTATACACGATGGCAGTGCTCACATTAGGACACGGTGAGT
GGGATGATCGTATGCCAATTAAGTACATGACATTGTGTTGTTACATGAGT
AATACAGAAGTAAACGTTATTTAGGTCAGATTCTTTTTTTTCTTCCTCTT
CTTCTTCTCCAAACAAATAATGTCACTGACTTGGACCAGAAGACTGTCAC
CATGGTTACTGAAGGCGTTGCAGACACCCTGTGGTGTTCAATTATGTTAT
GTAGCAAGTGGCAGGACAAAGCTGGAGGGGCTGGTCACCATATATGAATG
TGTTTAAGTAAGAATAAACAGAGCAGTACGTAAACTGTTTGTTAGGCTAG
ACCATGTACATGTGAAGGGATACATTATGCATAATTTGCTTGTAAATGTG
TCAAATGCCTTTACTCTCTAAACCGCTATCCCTACCGAAGCGTTTCGGAT
CGGTGGGCGGTACCGGAGCCTGTGGTTTGCGGCTCTGCTGCACGGCGTGG
TTACAGAGACGGTTTGCTACTGGACACCGGAAATCAACAACTTCTGGCAT
GCGCAGTCTTCCGTCATGATGCTGGGCAAGAGACTTCCTCTCTACATCAT
GCTTTGTCGTGAGTATTAATCATGTATACGTAGGAGTGCACAGTATGTGT
GGAGACCATAATCGAATAAATCTGTAAACTGTCTCAGTCGCGTTTGGGAC
CGCATTCTTCAAACTTGCAGCAGCGACACCTAGCTGCAGTGCCAAGTATA
ACCAGTCAGTATTTCCCCGAACAGGTGACAGACGGTTACCTATTATAAAC
GTCGGGGAAATGGTTGCACACAGAGAACTTTTTATCATGTATACTGTCTG
TGTATCGCCGTATAACGATAATGTTAAATTGTAAGAAAGCGTACAAGAAC
AACCACAGATTATGCTGTTACGGCAATGTCAGGGTTCAAATGTCTTTTAA
AAAGAGTTTTACGAAAAATTGTCATTACAGGTATGTTGCACATCAGATCT
TGTAAAATTCTGTTAAATTGATGATCAGAATTGGTGATCAGACTATGAAA
AATGTACACGTGTTTCACAAAATGTCGAATTTAANCATCTGATCTTGTAA
AATTCTGTTAAATTGATGATCAGAATTGGTGATCAGACTATGAAAAATGT
ACACGTGTTTCACAAAATGTCGAATTTAACTCTATCTACAGATTCTACAT
AGATATGGATTGGTGTTTGTGCCATGAAGCTGAATCCGTTTTTGGCGACG
CCTCAGGTGCGAGCCTAATAGTATAGTATTGTGTGCAGTTTGCAAGAATT
ATAGGAATTGTACAGGCATTTGTCTACAGGAATCCTGTTCCATTTGTGTG
TTTTCTCTGTAGATCCAGTCTTCAACTATGTTTCCAACGTCGCCGCCAGT
CGGCTGAAGCTAGGTATCTTCCCAACGGCTTATACATCGGCGCTGGCGGA
CTGTGTTTCTTTTCACGTGTTTGACATCATCGCCATCAAACTGCTATGGT
GGACATGGCATGACACGGATCCGACCATCTACGAACGGCACTTTTGGGTA
AACATTTTCCTCTAACTTACTATATCTAGTCTTAATACCATCAAGCCTTC
GGGTACTGAAGTAGCCACATCGGCGAAACCGGTCTGGGCGACAGTAATGA
TAATCATGATAATGGTTTATTTGTTCAGACATTGCCCGTGCAATGGCAGC
TAGTGCTGAATTGCTGCAGGGTTTACAATCACATGATACAAAGCAGATAC
ATGTACATATTTGCACTTTGTGGAACTGTCGCAAGGGTTTGGTACACATT
TTTATTTGACTATTGTATAGTGCGAGGCGGAAGATGGTGTAACCGTAGTC
GATCCATAAAACATACTATATTTCACGGAGGTATGAGATCTTACGTGTGT
TTTTAGGTGCCGTTCACCAGTACCTTGTACCGGCTCACATTCTCTCCTAC
ATTCACCCTGTTCTTTTACGGAACTCACAAGGTGATGACAGGAAAACGCA
TGTTACAAGCCGGAAGGTACGTAACGTTAGGTCAATTTAGTGCATACTTT
ATTGAACTGTGTTTTGTTTTACATTATTGGCAAAATCAATTGTTGGCAAA
ATCAATTGTCACAAGGAATGATAGATGTCTTTAGGCTTTCGGGACAAAGC
TAGTATACTTCCACAGGGGTCGTGTGACGTAACGGCAGGTTGCTCGGCCC
AGAACCCAGCGGTTCCTGGTTCGAATCCCTTCACGTCACCGATGTTGTGT
CCCTGGGAAAGGCACTTTACACGACTTTCCTCAATCCACCCAGATGTAGA
AATGGGTATACTGATCTCTGTACGTGGTACTTGAGTGCAGTGCCACGTCA
TCCTTGTCTGTCCAAAAACGACGTAACACAATATCACAGGGAATTTTCTC
TGTCTTGGATTGAGAACGGTGACTCATACCAATGACCACCAGAACCGGTC
CCGAGCACTTAGGCAAGAACATGTAGCTACACAAACTCGTGATTTAGAGG
TTGGGTTATCAACCACAACACCACAGCATACATGATTTTAAAACAATGTC
TGTGTTCGACATAGCTCTCCTTGGTACACAGCTGTATAGTCAACTCTTTT
CCAGCTGATGTATATGCTACCATCAACGGCATCAGAGCAGCTGATAGCAG
AGAAACAATAGTGCTATGTACCAGAGAGAACTATGTTGAATACCTTTCCC
AAACTGCAGCTGATGAAATAATTTACGAATGTCTATGTTTTTTTACCAGT
TTTCTCCAGGAGACCGCTTCCATCCTTCTCACGGGCCTCCTGACCTTCCC
CGCGGCCGTCGCGACGCACTTCATCCCGCTCTACCACAGCCTGCACGACG
CGCTCGACGCCAGCTCCGAGGTCTGCGTCCTCGCCGTCATCTACCTGTAC
ATCCTCATCGTGTGGGTGTCGGACAGGAACGGTCCGGAGGAGGCCAGGCC
CAGGAAGAAAGGTGAGTTAACTCAATACAGTTTTCAAGTCAAGTCAAAGC
CTTTATTTCTTTCGAATGTTTGTTCGGCCAGTTTTCCGCTTTTCAACAAG
GTCGAAGTGGAGGGGGATCCGGAGGAGTCACGGATAAAGAGTGAGGTTTT
GAGGAGGTTTCTGGTGTCTTTTTTCCGCACTCATGTCTTAGGAGGAGTGG
TTAGGCTAGCGGACACAAGTTTGAAAGGTGAAGGGTTCGATTCCTGGTAT
CCCTGGCTAGACGCTTTGTCCTTGAGAAAGGCACTTAACACGACTTTCCT
CACTCCACCCAGGTGCAAAAATGGGTACCTGACTTCGGTTGGGGAGGCAA
AAGGTTGTGGAAGGCGAGGGATTGGCACCGCTCTTCCATACCTTGCCCTA
AACACATTGCATAACAACCCAAGAGCCACTACAGCCTCAAAAAGGCTATG
ACAGTACCTTTGCCCGTTTCGTGTCTTTTAAAAAATATATTTTTCAAATA
TATTTTTCCATTCTTAAGTATATGTTTTGCAGAAAATGGATATCATCACG
GAAATATTTATGTTGAGCCCAACATACTGTTGGGCGCAACATACTGTGTT
CGTAAGGTTTCTTTCTCCTGTCAAATCTTACAGTCGACGCAGCTCGGTCG
TCCCCCAGTGGACCAACTGAGCTGAAATTTGGTATACAGGTAGAGTGGGT
AAATACCCTGGCTGGGACCTTTTTTTCATTTTTTCGATATTGACCTTGAA
AGTGATTTTATTGAGGTTTTTCTGACCAAAAACGTACATTTTGGCCTCCT
GTGCTCTGGAAATACATCGAAATGACCTGAAATTTGCTATGGGGGTACAT
TGAACAAATTTTCAAAGAATCCCATTCGCACTTTCGGCATAAAACACTTC
GCAATACGATTTTAGAGGGTATTTGGAGGAGAATATCGGCTATTTTCCTC
ATATGGGGTCACTGACCTTTAGGTCACATCTTTATTCATCTGGCCAGGTG
GACTAATTCGGTAAGCCAATGAGAGAGCGCGGATTTAACAAGCTCAACCT
GATTGGTTGAAATAGTCAATTTAATTAGGGGCACTGCTCTGACAGGGGCC
AACACAACTTCACTACTCCCTGGCTCCCATCCTTGATTTGTTATTGTTGT
GTCCTACTGAAGTTAAGTGCAATTGAGAAGGTTGAAAACTTACGACACAC
GACATTTTTCGACACACACGGTGTTTTTCTTATTTTAACACTGCATGGAA
ACAAAGATTTCCACAAGTTTGCAAGCTTGGACACTATGGTGAAACTTGAC
ATTTCCTCGCTATGTACACGAATTTTCTACCCCTGTGTCACCAAGATTGG
ACACCAGTGCGCACAATAGTGCACACAAAGTGTCCAAAGTTTCCCACCTT
CGGAAACATCCCGTGTCGGGACGTTGACAATAACATTAACAATAACAATA
GAGAGTTGTGAAGTGCGTGAAAATTTACCTTGAGCAAGGAGGCCCTCGCT
TAGAGTAATTGTTTAAATTTTTAGGCTAAAAATTACGTAAACCTAAGAAT
TTTCAACCTCCTTGCGTAAACCCCTGTTACATGTCTACACTATCGGGCCG
CGGGAAAGTCTTGAATATCGGCGCTGATCGATAGCGTATTAAACAGAATG
TGTGGCGTAGCGTTGTACTAAAAAAATAGTATTTTCATCGCAACCTGACT
GGCACTTGTTTAAAAAAGTCGAAGATTTCTCCACACACAATCGTCTGCAA
CTTGTTTTGTTTGCGGTACCAGATAGTCGGCTTGATGGCGAGGTTTTGTT
GGTCGCCTTTTTGCATATATTAACAGTGTCATGCCAGCGCCATATTGTAT
TATCGGCCCTTCATCTATATCGTTAGCCTCTATGCCACAGTCGCTTTTTG
CGTGGGGAGGGAAATGGGCGAAACATGTTGCATTTGCTCCCGCAAATGTT
GCCTTTCTAGTTCATTCTATTTCTATTCTTCGTGAACAGGTAAGCACCCC
TGGAAGGACGAGCTGACCCTGGTTGTTCTGATCCACTTCCTGACCTTCGC
TGGACTGGCCGTTTTCGCTAAACCGGAGTCGATCGTGTCTACTGGGGTAC
ACGAACCACTCGGACCCTGCAACGAGACAGTGCATTTCTACAATGCCATT
GGACAGGTCTGTATATCACAAACTGAAAGAGCACTGTAGACGGTGTGTGT
TTCATCGTGCATGCACTTATACGTTGGAAATACATACACCACCACTCTAC
CACGATCGTTAGACCGGTTGAACGGCCGGCTGAGTAGAGTGTTCGCTTTG
CATTTGGTAGGTCGTGAGTTCGATCCCGGCCGATCATACCACAGAGTTTA
AAAAACGATACACACTACTTTCCTACTTAGCACTCAGCATCTGGGAGTGT
GGTAGTTGAACACACACAACTACCAGTGAACTAACCCCCTGCTGTAGTGA
TTGCACAAAGTTGTGTGGCCCAAGGGCTATTGAAACGGAAATGGGCGCGA
CATATTCGCCATCTGGTGAAGGAAGAACTTTGATACTACGCTCATCATTG
AAAAATCCATCCAGTTGCTTGAGTAACGTCTGTATTGTGTATACCAAGCT
CAAATGTGCTATTCACCCATAGCGTTCATCAGTGATCATGATAGCTTTAC
ACTATAACCAAAAATACATAGAATGCTACATTAGGTGTGCATATCACAAG
GAAAATACAATGTTATAGTACATATTACGTGACAGTTTTGCAAGGCCTGA
CAATTTCCTGAAAGCAAATGAAATGCATTTATTCGTCAGGGAAAGGTGAA
GTTATCCTCATTCTCGTTTCTCTGGAACTGTGCTTATCATAATGAAAAAG
AGGGTTTTCCCTATTCACAGGTTGTATCTAAGAGGAAGTATCTGTGTCCC
ACCGACTATGACGAGGGCTACATGGATTTCCACTGCGTTCACGGTGGTAA
GGCTCCCCCTGGCGTGCACCACTGGTACACCATCTGTGGAACCCCTTACG
AGAACCATGCCGAATACATTACTGTTGTGTGGGGCTTCTGTCTGCTGGGT
CTGGCCTACTACTACAACCTACTGGCCTGTTCTGGTCTGGACGAGGCACC
GAACAAGAAACACAAAACAAACTAA Coding sequence (CDS) from alignment at Sc0000280:65505..72329+ >Blg00017.0 ID=Blg00017.0|Name=Blg00017.0|organism=Branchiostoma lanceolatum|type=CDS|length=1215bp|location=Sequence derived from alignment at Sc0000280:65505..72329+ (Branchiostoma lanceolatum) ATGGCTGAGTCTTGGTGGATCGCGTTCCGTAGTCCGTTGGAGATCTATGA GAAGCATGGCAACTTTCTGGTGGCTGAAATCGCCCTATACACGATGGCAG TGCTCACATTAGGACACGCGTTTCGGATCGGTGGGCGGTACCGGAGCCTG TGGTTTGCGGCTCTGCTGCACGGCGTGGTTACAGAGACGGTTTGCTACTG GACACCGGAAATCAACAACTTCTGGCATGCGCAGTCTTCCGTCATGATGC TGGGCAAGAGACTTCCTCTCTACATCATGCTTTGTCATCCAGTCTTCAAC TATGTTTCCAACGTCGCCGCCAGTCGGCTGAAGCTAGGTATCTTCCCAAC GGCTTATACATCGGCGCTGGCGGACTGTGTTTCTTTTCACGTGTTTGACA TCATCGCCATCAAACTGCTATGGTGGACATGGCATGACACGGATCCGACC ATCTACGAACGGCACTTTTGGGTGCCGTTCACCAGTACCTTGTACCGGCT CACATTCTCTCCTACATTCACCCTGTTCTTTTACGGAACTCACAAGGTGA TGACAGGAAAACGCATGTTACAAGCCGGAAGTTTTCTCCAGGAGACCGCT TCCATCCTTCTCACGGGCCTCCTGACCTTCCCCGCGGCCGTCGCGACGCA CTTCATCCCGCTCTACCACAGCCTGCACGACGCGCTCGACGCCAGCTCCG AGGTCTGCGTCCTCGCCGTCATCTACCTGTACATCCTCATCGTGTGGGTG TCGGACAGGAACGGTCCGGAGGAGGCCAGGCCCAGGAAGAAAGGTAAGCA CCCCTGGAAGGACGAGCTGACCCTGGTTGTTCTGATCCACTTCCTGACCT TCGCTGGACTGGCCGTTTTCGCTAAACCGGAGTCGATCGTGTCTACTGGG GTACACGAACCACTCGGACCCTGCAACGAGACAGTGCATTTCTACAATGC CATTGGACAGGTTGTATCTAAGAGGAAGTATCTGTGTCCCACCGACTATG ACGAGGGCTACATGGATTTCCACTGCGTTCACGGTGGTAAGGCTCCCCCT GGCGTGCACCACTGGTACACCATCTGTGGAACCCCTTACGAGAACCATGC CGAATACATTACTGTTGTGTGGGGCTTCTGTCTGCTGGGTCTGGCCTACT ACTACAACCTACTGGCCTGTTCTGGTCTGGACGAGGCACCGAACAAGAAA CACAAAACAAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00017.0-exon-Sc0000280-1570713199:65505..65513 | Blg00017.0-exon-Sc0000280-1570713199:65505..65513 | Branchiostoma lanceolatum | exon |
Blg00017.0-exon-Sc0000280-1570713199:66190..66298 | Blg00017.0-exon-Sc0000280-1570713199:66190..66298 | Branchiostoma lanceolatum | exon |
Blg00017.0-exon-Sc0000280-1570713199:66695..66862 | Blg00017.0-exon-Sc0000280-1570713199:66695..66862 | Branchiostoma lanceolatum | exon |
Blg00017.0-exon-Sc0000280-1570713199:67617..67801 | Blg00017.0-exon-Sc0000280-1570713199:67617..67801 | Branchiostoma lanceolatum | exon |
Blg00017.0-exon-Sc0000280-1570713199:68161..68270 | Blg00017.0-exon-Sc0000280-1570713199:68161..68270 | Branchiostoma lanceolatum | exon |
Blg00017.0-exon-Sc0000280-1570713199:69004..69215 | Blg00017.0-exon-Sc0000280-1570713199:69004..69215 | Branchiostoma lanceolatum | exon |
Blg00017.0-exon-Sc0000280-1570713199:71194..71360 | Blg00017.0-exon-Sc0000280-1570713199:71194..71360 | Branchiostoma lanceolatum | exon |
Blg00017.0-exon-Sc0000280-1570713199:72075..72329 | Blg00017.0-exon-Sc0000280-1570713199:72075..72329 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000280 | genome | Sc0000280:65505..72329 + |
Properties
Property Name | Value |
GeneID | Blg00017 |
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