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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000280:216427..221269+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00014.0 ID=Blg00014.0|Name=Blg00014.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4843bp|location=Sequence derived from alignment at Sc0000280:216427..221269+ (Branchiostoma lanceolatum) ATGAAGATACACCTTTCTTACAAATACACAGGTTAGAAGATACAAGGCGT
CTTCGAAGATATGGCGGACCCATACGCATACCCGGCGCCAGTGTTTGCGC
AACCCCTACCACCACCGCCAGTATATCCGTCAGGTTCGTACCATCTCATG
CCAACACTCATAGACCCCGTTCATACTAAGCCTTTCATAGCCAGTTGAAT
AAATTAAAATATTTAATCGGCTAATTAACCCGGCTATCTTGGCTTCATGA
ACGGCTAAATAAGGGTTTTAGAAAGCTTGCGTTCTCTCTATTAACAAATC
GGCACATAACTACCACACATTCAACTCAAATAAAAAGAAAAATTCAATAC
CAATTCATATTGATAATTATAAAAAGATCTAGCCCGTAATCGCTAAACTA
ACCTAGCAAACCTGAAGTATATGTAGCACAAATACTTAACTCTAGTTTTT
TAATTCTGTTTGCAGCACCAGGAACTGAGCCGGGTCCGTTGATGGTTAGG
AATCTGGAGGCACATGACGTCGACTTTGTCTCTCGAATGATGGTGGAAGC
TTTCAACGATAAGTTTGAACATGCGGTGGGCAAGAGTCGGTGAGTATAAA
TTCCTCTGGAGTGTGTTCAGACCTCAGATAATTATAAATCAACTTCAGAC
CTGGGAAATTGGTAGGGTAAGGTGTCTGTTTTGCATTTGGGAGATTGAAG
GTTCAAAATCCGGTAAGATCATGCAAAAGACTATAGAATGGTACTAGACT
CTCCAAAATTCTGCTTTCTCTGTTTAGCACTCGGCAGAAGGAGCTCGAGT
ATGGTAGTTTAACACATACCATTACCAGTAGACTAACCGCCGGCTGTGGT
GCTTTCATAACTGTGCGGCCAAATGGGTATATAGAGACAAGAAGGGCACC
ACCCAGTTTAGAACATATAGAGATGTTCTGAAGTTGAAATCTTCTCACAC
CTTTCAGTAAATAGGGGCCCTATATACTGAAAGGTGTGAGAAGATTTCAA
CTTCAGAACATCTCTATATGTTCTGAAATGCAAGCCGGAGGCCTCGTATT
TGAGGAGAGCCACAGCTCGAGCACGTTAAAGGCAACCAAAGCAATATCAA
GGGGGGGGGGGGGNATTTGAGGAGAGCCACAGCTCGAGCACGTTAAAGGC
AACCAAAGCAATATCAGGGGGGGGGGGGGGAAATGTAAATAAAAAAGAAA
TGCTGAAATATATATGATAGTGATATCTACTGACATTGTTTAGCACATTT
GCGTAATAACCTCATACTTTTAGGATTTATAAAACCTCTGAAAATCGTAC
CGTACGATGATCCCCTTAGTATACAAAAACTCCAGTCCAGTGAGTTCTCA
CATCACACCAACGTCATATCATGCGTAGAGATAACTAAATAAATTGACTT
TGAAATCCAATTTTTCGGACCCTGATATTGGTTTCCTTTAAAAAGATCTT
ACCGAACTTATTGATAAGAGTAGGCTAGGGGTCCATCCCGTTGTGAGTGG
ATCAAACCTTGTACTTACTGTACAAAACTGGTGTGAAATGAACGTCACAT
GAAAAATGTTCTGTAGAATGGAAGGTGCCGTCCAACAGTCAGCCAGGATG
CTGGGCAGGTCCCGTCAAGTGTGGCACAGATATTTCATCGCCTTGTATGA
AGGCAGGCCAGCAGGCGCCATGGCCATCAGATTCCACGGAGACAGGTCAG
TTTATAGTGTGTGGCATTGGTGTGGCAAATGGTGTGGCATTAAGCCTCCC
CAACTGGAGTCAACGGCAACTGATAGAACAGCCTGGAGAGCACTTATATT
CCGAGCTACAACCAACTTTGAAGAAGAACGGAGGCAGCGGCTGAATGCTG
CCAGAGCCAAGCGCCACAGGACAGCAGCAACAGCGGTCCAGACAGCGGAC
CACCAGTGCACAACATGTGGACGGCTGTGTGCCTCAAGCTTTGGACTGAG
AAGCCACATGAGGGCACATCCCCCGTGAATGAGCAACACACGACAGTCAT
CTTCGACTTCGAAGGACTACCAAGATAACTCGCACGACTTATAATGTTGG
ATGCCTTATTATCTTCGCCAAGAAGATTATGTTTTGGGTAGCGTTTGTAT
GTGTGTGTGTGTGTGTAATCTAGCAGCTTAACTCAAGAAGGCTAGGATGG
ATTGTCTTGATATTTGGTAGGTTGGTAGGTCTTGTTATTGATGCAGACAT
GCCGGGTTTTGATTTGGCAATCGTGAAGATTGTGGGGTCGTGTGGCGTAA
CAACAGGGTGTTCAGCCAAGAACCAAGAGCCAAGTCCCGGGTTCAAATCT
CCCCAACGCCACCGATGTTGTGCCTTGGGAAAGGCACTTTACACGACTTT
CCTCACTCCACCCAGATGTAAAAATTGGTGTATTTGTACGTGGCACTGTT
AGAAATAAATTATAAAAACTTGAATGCATTGTCACATCGTCCTTGTCTGT
CAAAAAGCGAAGCAAAAAAAAATCGGAATACTTTCAGGCTTCAGTCATAA
ACTAGACTACACATTGCAGACAATAATCTATTTTGAGTGGAAATGAACAA
CGCGTGAATGTGAATAATTTCTGCTGTCATCAAATCTATCGATCCTGTTT
ACTTTTCTATCAAAATGGCCTATACTGTTAGTCCGTGACTCGGTTTTCTA
GATATGCTCATCAGAATGTAACCTGGTTCCTTTGTCTCTTGCAGTGCGGA
GGAGGATTTCGAATGCGGGGAGGCTTGCTCATATCTCGGCTGCTGGGGCA
CTCGTGGGTATGGATCACATTTATTTGTTTGTTTGTTTGTTTGTTTGTTT
GTTTGTTTGTTAAATTCCTGGTGTAGATTAACAAACAGTAAACCACCTTG
TGGTGTAACACTTCAGTTCGTTACTTGCAGTTAGAATGCAAGTTCATCAA
ATACTGTTAAATTGCATTTATTTTCGAAGGGAGAAACCTTCATTTTCCCA
ATGTTTTAAGCTCGCGGTTGGTAGTTCTATTGTACAGAAGTACTCCATTG
GAAATGCATCTTTATATTGTCATGATTTTTCCGTGGGGAAGTCACTGCAA
AAATAAAACCACGGCGAACGAAGTGGCTAAACATTGATGAAATGTTATGT
CTTTGTTTTGCATATCTACATTTGAAGCATGGTGCACTGGGCTATGGGAT
CTTTCTATTTTCTTACAATCTTTATAAACCATTGCAGACTCATTTGTCTG
GGCTGTGCCACGGGAAGCGAAAGCGTTCCTATGGGGGAGTGTTACGTGGA
CCATATCGGCGTGGACGCAAGCTTTCGCGGGAGAGGCATCGGCAAGATGC
TGATGGATAGGGCTGATTATGAGGCCAGGCAACGGGGATGCAGGGTAGGC
TGAATGGCAACATTGTATACATCTTGAAATATTCTATTGTAAATTCATTT
TTCAGTAGTTTTATTTCATGCTAATTGCCATTCTCGCATTGGTTGAACTG
CTAATTGATAGTGATGGACAGTCAGGATTGGTCTTGATTGGATCAATTTC
TTGTCAAACTTTCTCTTTTCTTACAACACTAGATTTGATGTACAGTCAAA
CCTGGATTCATCAACCCCTAATTGTAGAGGGACTGAGGACAAATCATTGT
TTAGGACAGTTGGTTGCTTAGGACACGGTGGAGTTAATCATGTTAATCAA
ATTAAAGTGGACGGGACTGTTTTAATGTGGCTTGTGACTGGAGGTGGCTG
GCTGCGACAGGTGGTTGTAAATACTTTGCATTTGGGACCGCATCTGTTAG
CAGCGACACCTAGCTGCAGTTACAGTGAAATAGAACCAGTCAGCATTGTC
CTGATGAAGGTGGCAGACAGTCATGGAAACATTGGCTTCTGTAAATTTCT
TGGTTGTGAATGAAGAACCTTGTTTGTTGTCCAACAGACGATTTTCCTGT
GGGTGAAGCAGAGTAACCGCGCTGTTCACCTGTACGAACGTCAAGGCTAC
TCAATCTCTGAAACCGTCAACGGGAGCTGCTTGCTGCAATGTGCTTTAGG
AAGTGCGGTGAGTCTGATTTACTTATTGGTTTATCAGTAAGAAGATTAAA
AGACTGTGTCAAGGGCACATTGTTAGAAGGCGGAGCCCATCCCTAAATTC
CTTCCACCACTGTTCACCTCCCTAACCGAAGTCAGGTACCCATTTTTACA
CTTTTCCCAGGGACACATTGTCTAGCCAGGAGTACCAGGAACCAAACCCG
TGATCTCTTGATCTCGTGTCTGCTATGCCACTTTGCCATTCGATGCCACA
AATGGTATTAGTATCTACAGTTACAACCACTGCGAAGCTCAGTGCAAACT
AGATGACCTTCGCTTTAGTAACCTTAAAAATCGAGGGGACATTGGACTAG
CTGGAAATGGTGAACTAGAATCTGTCATAAAGGACAGAGCGGTGTGTGGA
AACATGTTGTGGAGGACATTAACAGAAATAACTAATCTGATGTCCACCTT
TTGCATCCCGTACCTCCAATCGCGTGATCAGCTATCATTCCATTAATTTC
ATACATGTACTTCTGCACACTATAAGTGCAGGCACATTCGTTGTACGATT
TTCTGCAGTACTCAGCTTTTGCATGTAGACTATGACAGAACTGTTGATAA
AGATCTGCAACAACCTTATCGAGACAGCTTACAAATCCACGACTGTTCCA
ACAATGCTATCAATTTGCACTCATCCATTAATTGTACAAGGAATGTGTCG
CCTAATTTTTGTGGAAATCTCAGCTACCAAATTTTATATCTGATGATAGT
TGCAGTGTTTTCCAATGTTCATCCCTTGCCTTACAGGTACTGTTTGAAGT
AGTTTTTTTGTTTATTGTGACGTCGGCGTGGCGTAACGGTTAG Coding sequence (CDS) from alignment at Sc0000280:216427..221269+ >Blg00014.0 ID=Blg00014.0|Name=Blg00014.0|organism=Branchiostoma lanceolatum|type=CDS|length=681bp|location=Sequence derived from alignment at Sc0000280:216427..221269+ (Branchiostoma lanceolatum) ATGAAGATACACCTTTCTTACAAATACACAGCACCAGGAACTGAGCCGGG TCCGTTGATGGTTAGGAATCTGGAGGCACATGACGTCGACTTTGTCTCTC GAATGATGGTGGAAGCTTTCAACGATAAGTTTGAACATGCGGTGGGCAAG AGTCGAATGGAAGGTGCCGTCCAACAGTCAGCCAGGATGCTGGGCAGGTC CCGTCAAGTGTGGCACAGATATTTCATCGCCTTGTATGAAGGCAGGCCAG CAGGCGCCATGGCCATCAGATTCCACGGAGACAGTGCGGAGGAGGATTTC GAATGCGGGGAGGCTTGCTCATATCTCGGCTGCTGGGGCACTCGTGGACT CATTTGTCTGGGCTGTGCCACGGGAAGCGAAAGCGTTCCTATGGGGGAGT GTTACGTGGACCATATCGGCGTGGACGCAAGCTTTCGCGGGAGAGGCATC GGCAAGATGCTGATGGATAGGGCTGATTATGAGGCCAGGCAACGGGGATG CAGGACGATTTTCCTGTGGGTGAAGCAGAGTAACCGCGCTGTTCACCTGT ACGAACGTCAAGGCTACTCAATCTCTGAAACCGTCAACGGGAGCTGCTTG CTGCAATGTGCTTTAGGAAGTGCGGTACTGTTTGAAGTAGTTTTTTTGTT TATTGTGACGTCGGCGTGGCGTAACGGTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00014.0-exon-Sc0000280-1570713199:216427..216457 | Blg00014.0-exon-Sc0000280-1570713199:216427..216457 | Branchiostoma lanceolatum | exon |
Blg00014.0-exon-Sc0000280-1570713199:216892..217015 | Blg00014.0-exon-Sc0000280-1570713199:216892..217015 | Branchiostoma lanceolatum | exon |
Blg00014.0-exon-Sc0000280-1570713199:217993..218121 | Blg00014.0-exon-Sc0000280-1570713199:217993..218121 | Branchiostoma lanceolatum | exon |
Blg00014.0-exon-Sc0000280-1570713199:219121..219183 | Blg00014.0-exon-Sc0000280-1570713199:219121..219183 | Branchiostoma lanceolatum | exon |
Blg00014.0-exon-Sc0000280-1570713199:219614..219770 | Blg00014.0-exon-Sc0000280-1570713199:219614..219770 | Branchiostoma lanceolatum | exon |
Blg00014.0-exon-Sc0000280-1570713199:220314..220433 | Blg00014.0-exon-Sc0000280-1570713199:220314..220433 | Branchiostoma lanceolatum | exon |
Blg00014.0-exon-Sc0000280-1570713199:221213..221269 | Blg00014.0-exon-Sc0000280-1570713199:221213..221269 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000280 | genome | Sc0000280:216427..221269 + |
Properties
Property Name | Value |
GeneID | Blg00014 |
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